RNA–Protein interactions for RNA: ENST00000558099.1

CSHL1-207, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 2

Gene CSHL1, Length 1,590 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-207ENST00000558099 A0A0C4DFX4 3053 aa15.05■□□□□ 0
CSHL1-207ENST00000558099 POLR3GO15318 223 aaPredicted RBP15.05■□□□□ -0
CSHL1-207ENST00000558099 MYL3P08590 195 aa15.05■□□□□ -0
CSHL1-207ENST00000558099 TGFB3P10600 412 aa15.05■□□□□ -0
CSHL1-207ENST00000558099 TNNT3P45378 269 aaPredicted RBP15.05■□□□□ -0
CSHL1-207ENST00000558099 FOSBP53539 338 aa15.05■□□□□ -0
CSHL1-207ENST00000558099 PPP2R3AQ06190 1150 aa15.05■□□□□ -0
CSHL1-207ENST00000558099 CT47A1Q5JQC4 288 aaPredicted RBP15.05■□□□□ -0
CSHL1-207ENST00000558099 KRT40Q6A162 431 aa15.05■□□□□ -0
CSHL1-207ENST00000558099 ZNF365Q70YC5 407 aa15.05■□□□□ -0
CSHL1-207ENST00000558099 GPKOWQ92917 476 aaPredicted RBP eCLIP15.05■□□□□ -0
CSHL1-207ENST00000558099 SMARCE1Q969G3 411 aa15.05■□□□□ -0
CSHL1-207ENST00000558099 RNPC3Q96LT9 517 aaKnown RBP15.05■□□□□ -0
CSHL1-207ENST00000558099 EYSQ5T1H1 3165 aa15.04■□□□□ -0
CSHL1-207ENST00000558099 TMEM265A0A087WTH1 108 aa15.04■□□□□ -0
CSHL1-207ENST00000558099 VWA3AA6NCI4 1184 aa15.04■□□□□ -0
CSHL1-207ENST00000558099 PPP6R2O75170 966 aa15.04■□□□□ -0
CSHL1-207ENST00000558099 F2P00734 622 aa15.04■□□□□ -0
CSHL1-207ENST00000558099 CYP2C9P11712 490 aa15.04■□□□□ -0
CSHL1-207ENST00000558099 XBP1P17861 261 aa15.04■□□□□ -0
CSHL1-207ENST00000558099 GUCY1B3Q02153 619 aa15.04■□□□□ -0
CSHL1-207ENST00000558099 RBL2Q08999 1139 aa15.04■□□□□ -0
CSHL1-207ENST00000558099 TBX2Q13207 712 aaPredicted RBP15.04■□□□□ -0
CSHL1-207ENST00000558099 GPNMBQ14956 572 aa15.04■□□□□ -0
CSHL1-207ENST00000558099 LEKR1Q6ZMV7 388 aa15.04■□□□□ -0
CSHL1-207ENST00000558099 CEP112Q8N8E3 955 aa15.04■□□□□ -0
CSHL1-207ENST00000558099 LRRN4CLQ8ND94 238 aa15.04■□□□□ -0
CSHL1-207ENST00000558099 PPTC7Q8NI37 304 aa15.04■□□□□ -0
CSHL1-207ENST00000558099 ACBD3Q9H3P7 528 aa15.04■□□□□ -0
CSHL1-207ENST00000558099 BCAS3Q9H6U6 928 aa15.04■□□□□ -0
CSHL1-207ENST00000558099 HOOK1Q9UJC3 728 aaKnown RBP15.04■□□□□ -0
CSHL1-207ENST00000558099 CNTNAP5Q8WYK1 1306 aa15.03■□□□□ -0
CSHL1-207ENST00000558099 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.03■□□□□ -0
CSHL1-207ENST00000558099 A0A1B0GVL5 298 aa15.03■□□□□ -0
CSHL1-207ENST00000558099 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.03■□□□□ -0
CSHL1-207ENST00000558099 SPATA31C2B4DYI2 1134 aa15.03■□□□□ -0
CSHL1-207ENST00000558099 MYO1CO00159 1063 aa15.03■□□□□ -0
CSHL1-207ENST00000558099 SERPINC1P01008 464 aa15.03■□□□□ -0
CSHL1-207ENST00000558099 SUPT20HL2P0C7V6 817 aa15.03■□□□□ -0
CSHL1-207ENST00000558099 ACRP10323 421 aa15.03■□□□□ -0
CSHL1-207ENST00000558099 LAMC2Q13753 1193 aa15.03■□□□□ -0
CSHL1-207ENST00000558099 HSDL1Q3SXM5 330 aa15.03■□□□□ -0
CSHL1-207ENST00000558099 CELF3Q5SZQ8 465 aaKnown RBP15.03■□□□□ -0
CSHL1-207ENST00000558099 HDXQ7Z353 690 aa15.03■□□□□ -0
CSHL1-207ENST00000558099 CMTR1Q8N1G2 835 aaKnown RBP15.03■□□□□ -0
CSHL1-207ENST00000558099 CCDC82Q8N4S0 544 aa15.03■□□□□ -0
CSHL1-207ENST00000558099 PPP1R13LQ8WUF5 828 aa15.03■□□□□ -0
CSHL1-207ENST00000558099 AIFM3Q96NN9 605 aa15.03■□□□□ -0
CSHL1-207ENST00000558099 CXXC1Q9P0U4 656 aaPredicted RBP15.03■□□□□ -0
CSHL1-207ENST00000558099 DACH1Q9UI36 760 aa15.03■□□□□ -0
CSHL1-207ENST00000558099 ADAM21Q9UKJ8 722 aa15.03■□□□□ -0
CSHL1-207ENST00000558099 RAB21Q9UL25 225 aa15.03■□□□□ -0
CSHL1-207ENST00000558099 V9GY48 417 aaPredicted RBP15.03■□□□□ -0
CSHL1-207ENST00000558099 PITPNM1O00562 1244 aa15.02■□□□□ -0
CSHL1-207ENST00000558099 UBA1P22314 1058 aaKnown RBP15.02■□□□□ -0
CSHL1-207ENST00000558099 HOXC8P31273 242 aa15.02■□□□□ -0
CSHL1-207ENST00000558099 CCL23P55773 120 aa15.02■□□□□ -0
CSHL1-207ENST00000558099 HIC1Q14526 733 aa15.02■□□□□ -0
CSHL1-207ENST00000558099 SLC39A14Q15043 492 aa15.02■□□□□ -0
CSHL1-207ENST00000558099 SAFBQ15424 915 aaKnown RBP eCLIP15.02■□□□□ -0
CSHL1-207ENST00000558099 BRDTQ58F21 947 aaPredicted RBP15.02■□□□□ -0
CSHL1-207ENST00000558099 AXDND1Q5T1B0 1012 aaPredicted RBP15.02■□□□□ -0
CSHL1-207ENST00000558099 PSRC1Q6PGN9 363 aaPredicted RBP15.02■□□□□ -0
CSHL1-207ENST00000558099 KCNV1Q6PIU1 500 aa15.02■□□□□ -0
CSHL1-207ENST00000558099 USP17L6PQ6QN14 398 aa15.02■□□□□ -0
CSHL1-207ENST00000558099 SRLQ86TD4 932 aa15.02■□□□□ -0
CSHL1-207ENST00000558099 FAM177A1Q8N128 213 aaPredicted RBP15.02■□□□□ -0
CSHL1-207ENST00000558099 NEK11Q8NG66 645 aa15.02■□□□□ -0
CSHL1-207ENST00000558099 DHX38Q92620 1227 aaKnown RBP15.02■□□□□ -0
CSHL1-207ENST00000558099 RRP36Q96EU6 259 aaKnown RBP15.02■□□□□ -0
CSHL1-207ENST00000558099 C16orf70Q9BSU1 422 aa15.02■□□□□ -0
CSHL1-207ENST00000558099 NAA15Q9BXJ9 866 aaKnown RBP15.02■□□□□ -0
CSHL1-207ENST00000558099 PARD6BQ9BYG5 372 aa15.02■□□□□ -0
CSHL1-207ENST00000558099 BRMS1Q9HCU9 246 aa15.02■□□□□ -0
CSHL1-207ENST00000558099 CHD7Q9P2D1 2997 aa15.02□□□□□ -0.01
CSHL1-207ENST00000558099 PPFIA4O75335 1185 aa15.02□□□□□ -0.01
CSHL1-207ENST00000558099 STAM2O75886 525 aa15.02□□□□□ -0.01
CSHL1-207ENST00000558099 SASH3O75995 380 aa15.02□□□□□ -0.01
CSHL1-207ENST00000558099 PKN1Q16512 942 aa15.02□□□□□ -0.01
CSHL1-207ENST00000558099 GDF6Q6KF10 455 aaPredicted RBP15.02□□□□□ -0.01
CSHL1-207ENST00000558099 TYW1BQ6NUM6 668 aa15.02□□□□□ -0.01
CSHL1-207ENST00000558099 TRAF7Q6Q0C0 670 aa15.02□□□□□ -0.01
CSHL1-207ENST00000558099 TMEM139Q8IV31 216 aa15.02□□□□□ -0.01
CSHL1-207ENST00000558099 MSANTD4Q8NCY6 345 aa15.02□□□□□ -0.01
CSHL1-207ENST00000558099 ZFP91Q96JP5 570 aaPredicted RBP15.02□□□□□ -0.01
CSHL1-207ENST00000558099 BAG1Q99933 345 aaPredicted RBP15.02□□□□□ -0.01
CSHL1-207ENST00000558099 GTF2IRD1Q9UHL9 959 aa15.02□□□□□ -0.01
CSHL1-207ENST00000558099 HPSEQ9Y251 543 aa15.02□□□□□ -0.01
CSHL1-207ENST00000558099 MMP1P03956 469 aa15.01□□□□□ -0.01
CSHL1-207ENST00000558099 IQCF3P0C7M6 154 aa15.01□□□□□ -0.01
CSHL1-207ENST00000558099 MYCLP12524 364 aaPredicted RBP15.01□□□□□ -0.01
CSHL1-207ENST00000558099 CCND2P30279 289 aa15.01□□□□□ -0.01
CSHL1-207ENST00000558099 GNG11P61952 73 aa15.01□□□□□ -0.01
CSHL1-207ENST00000558099 DGKDQ16760 1214 aa15.01□□□□□ -0.01
CSHL1-207ENST00000558099 LONRF2Q1L5Z9 754 aa15.01□□□□□ -0.01
CSHL1-207ENST00000558099 TRIM71Q2Q1W2 868 aaKnown RBP15.01□□□□□ -0.01
CSHL1-207ENST00000558099 PCNX4Q63HM2 1172 aa15.01□□□□□ -0.01
CSHL1-207ENST00000558099 XRRA1Q6P2D8 792 aa15.01□□□□□ -0.01
CSHL1-207ENST00000558099 SRGAP1Q7Z6B7 1085 aa15.01□□□□□ -0.01
CSHL1-207ENST00000558099 SCLYQ96I15 445 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms