RNA–Protein interactions for RNA: ENST00000557442.5

HNRNPC-232, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-232ENST00000557442 MYO9BQ13459 2157 aa11.86□□□□□ -0.51
HNRNPC-232ENST00000557442 A0A1W2PPC1 479 aa11.86□□□□□ -0.51
HNRNPC-232ENST00000557442 DDX11L8A8MPP1 907 aa11.86□□□□□ -0.51
HNRNPC-232ENST00000557442 RSPH10B2B2RC85 870 aa11.86□□□□□ -0.51
HNRNPC-232ENST00000557442 PARNO95453 639 aaKnown RBP11.86□□□□□ -0.51
HNRNPC-232ENST00000557442 RPLP2P05387 115 aaKnown RBP11.86□□□□□ -0.51
HNRNPC-232ENST00000557442 PFKMP08237 780 aa11.86□□□□□ -0.51
HNRNPC-232ENST00000557442 RSPH10BP0C881 870 aa11.86□□□□□ -0.51
HNRNPC-232ENST00000557442 PRPHP41219 470 aa11.86□□□□□ -0.51
HNRNPC-232ENST00000557442 FXR2P51116 673 aaKnown RBP eCLIP11.86□□□□□ -0.514e-14■■■■□ 21.2
HNRNPC-232ENST00000557442 ATP2C1P98194 919 aaPredicted RBP11.86□□□□□ -0.51
HNRNPC-232ENST00000557442 TBC1D8BQ0IIM8 1120 aa11.86□□□□□ -0.51
HNRNPC-232ENST00000557442 SHHQ15465 462 aa11.86□□□□□ -0.51
HNRNPC-232ENST00000557442 PLA2G4FQ68DD2 849 aa11.86□□□□□ -0.51
HNRNPC-232ENST00000557442 TRAF7Q6Q0C0 670 aa11.86□□□□□ -0.51
HNRNPC-232ENST00000557442 RPUSD2Q8IZ73 545 aaKnown RBP11.86□□□□□ -0.51
HNRNPC-232ENST00000557442 METTL13Q8N6R0 699 aa11.86□□□□□ -0.51
HNRNPC-232ENST00000557442 ERMNQ8TAM6 284 aa11.86□□□□□ -0.51
HNRNPC-232ENST00000557442 RNPC3Q96LT9 517 aaKnown RBP11.86□□□□□ -0.51
HNRNPC-232ENST00000557442 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.86□□□□□ -0.512e-8■■■□□ 14.8
HNRNPC-232ENST00000557442 SH2D3AQ9BRG2 576 aa11.86□□□□□ -0.51
HNRNPC-232ENST00000557442 RAB34Q9BZG1 259 aa11.86□□□□□ -0.51
HNRNPC-232ENST00000557442 FTOQ9C0B1 505 aaKnown RBP eCLIP11.86□□□□□ -0.51
HNRNPC-232ENST00000557442 ZSWIM4Q9H7M6 989 aa11.86□□□□□ -0.51
HNRNPC-232ENST00000557442 SMIM35A0A1B0GVV1 85 aa11.85□□□□□ -0.51
HNRNPC-232ENST00000557442 M0QZ92 97 aa11.85□□□□□ -0.51
HNRNPC-232ENST00000557442 MAGEB2O15479 319 aa11.85□□□□□ -0.51
HNRNPC-232ENST00000557442 NBNO60934 754 aa11.85□□□□□ -0.51
HNRNPC-232ENST00000557442 STBD1O95210 358 aa11.85□□□□□ -0.51
HNRNPC-232ENST00000557442 YWHABP31946 246 aaKnown RBP11.85□□□□□ -0.51
HNRNPC-232ENST00000557442 MRPS6P82932 125 aaKnown RBP11.85□□□□□ -0.51
HNRNPC-232ENST00000557442 TMEM62Q0P6H9 643 aa11.85□□□□□ -0.51
HNRNPC-232ENST00000557442 MBTPS1Q14703 1052 aa11.85□□□□□ -0.51
HNRNPC-232ENST00000557442 FOXD4L5Q5VV16 416 aaPredicted RBP11.85□□□□□ -0.51
HNRNPC-232ENST00000557442 HAUS3Q68CZ6 603 aa11.85□□□□□ -0.51
HNRNPC-232ENST00000557442 FAM173BQ6P4H8 233 aa11.85□□□□□ -0.51
HNRNPC-232ENST00000557442 DTHD1Q6ZMT9 781 aa11.85□□□□□ -0.51
HNRNPC-232ENST00000557442 ZNF365Q70YC5 407 aa11.85□□□□□ -0.51
HNRNPC-232ENST00000557442 ANO5Q75V66 913 aa11.85□□□□□ -0.51
HNRNPC-232ENST00000557442 C16orf59Q7L2K0 433 aa11.85□□□□□ -0.51
HNRNPC-232ENST00000557442 RPAINQ86UA6 219 aa11.85□□□□□ -0.51
HNRNPC-232ENST00000557442 C4orf19Q8IY42 314 aa11.85□□□□□ -0.51
HNRNPC-232ENST00000557442 FOXD4L4Q8WXT5 416 aaPredicted RBP11.85□□□□□ -0.51
HNRNPC-232ENST00000557442 CCDC43Q96MW1 224 aaKnown RBP11.85□□□□□ -0.51
HNRNPC-232ENST00000557442 NIFKQ9BYG3 293 aaKnown RBP11.85□□□□□ -0.51
HNRNPC-232ENST00000557442 ZSCAN16Q9H4T2 348 aaPredicted RBP11.85□□□□□ -0.51
HNRNPC-232ENST00000557442 LRWD1Q9UFC0 647 aa11.85□□□□□ -0.51
HNRNPC-232ENST00000557442 KIAA1671Q9BY89 1806 aa11.84□□□□□ -0.51
HNRNPC-232ENST00000557442 VWA3AA6NCI4 1184 aa11.84□□□□□ -0.51
HNRNPC-232ENST00000557442 MED24O75448 989 aa11.84□□□□□ -0.51
HNRNPC-232ENST00000557442 SLITRK3O94933 977 aa11.84□□□□□ -0.51
HNRNPC-232ENST00000557442 BMP15O95972 392 aa11.84□□□□□ -0.51
HNRNPC-232ENST00000557442 FGBP02675 491 aa11.84□□□□□ -0.51
HNRNPC-232ENST00000557442 ACTN1P12814 892 aa11.84□□□□□ -0.51
HNRNPC-232ENST00000557442 PDIA4P13667 645 aaKnown RBP11.84□□□□□ -0.51
HNRNPC-232ENST00000557442 CLCN3P51790 818 aa11.84□□□□□ -0.51
HNRNPC-232ENST00000557442 NPEPPSP55786 919 aa11.84□□□□□ -0.51
HNRNPC-232ENST00000557442 PKP1Q13835 747 aa11.84□□□□□ -0.51
HNRNPC-232ENST00000557442 SF3A1Q15459 793 aaKnown RBP11.84□□□□□ -0.51
HNRNPC-232ENST00000557442 TARBP2Q15633 366 aaKnown RBP11.84□□□□□ -0.51
HNRNPC-232ENST00000557442 HABP4Q5JVS0 413 aaKnown RBP11.84□□□□□ -0.51
HNRNPC-232ENST00000557442 TMEM240Q5SV17 173 aa11.84□□□□□ -0.51
HNRNPC-232ENST00000557442 IER5Q5VY09 327 aa11.84□□□□□ -0.51
HNRNPC-232ENST00000557442 ARL6IP4Q66PJ3 421 aaKnown RBP11.84□□□□□ -0.51
HNRNPC-232ENST00000557442 EFCAB12Q6NXP0 572 aa11.84□□□□□ -0.51
HNRNPC-232ENST00000557442 POTEGQ6S5H5 508 aa11.84□□□□□ -0.51
HNRNPC-232ENST00000557442 OTOP2Q7RTS6 562 aa11.84□□□□□ -0.51
HNRNPC-232ENST00000557442 LRRC71Q8N4P6 559 aa11.84□□□□□ -0.51
HNRNPC-232ENST00000557442 IGSF22Q8N9C0 903 aa11.84□□□□□ -0.51
HNRNPC-232ENST00000557442 SNX29Q8TEQ0 813 aa11.84□□□□□ -0.51
HNRNPC-232ENST00000557442 CEP170P1Q96L14 293 aa11.84□□□□□ -0.51
HNRNPC-232ENST00000557442 MAP7D2Q96T17 732 aa11.84□□□□□ -0.51
HNRNPC-232ENST00000557442 PPP1R16BQ96T49 567 aa11.84□□□□□ -0.51
HNRNPC-232ENST00000557442 HSD17B14Q9BPX1 270 aa11.84□□□□□ -0.51
HNRNPC-232ENST00000557442 MTIF3Q9H2K0 278 aaKnown RBP11.84□□□□□ -0.51
HNRNPC-232ENST00000557442 SUGCTQ9HAC7 445 aa11.84□□□□□ -0.51
HNRNPC-232ENST00000557442 TUFT1Q9NNX1 390 aa11.84□□□□□ -0.51
HNRNPC-232ENST00000557442 CYP26B1Q9NR63 512 aa11.84□□□□□ -0.51
HNRNPC-232ENST00000557442 CDY2AQ9Y6F7 541 aa11.84□□□□□ -0.51
HNRNPC-232ENST00000557442 TTC3P53804 2025 aa11.83□□□□□ -0.52
HNRNPC-232ENST00000557442 PP2D1A8MPX8 630 aa11.83□□□□□ -0.52
HNRNPC-232ENST00000557442 ZBBXA8MT70 800 aa11.83□□□□□ -0.52
HNRNPC-232ENST00000557442 RBAK-RBAKDNI3L0D1 243 aa11.83□□□□□ -0.52
HNRNPC-232ENST00000557442 LYPLA2O95372 231 aa11.83□□□□□ -0.52
HNRNPC-232ENST00000557442 F13A1P00488 732 aa11.83□□□□□ -0.52
HNRNPC-232ENST00000557442 CHRNA1P02708 482 aa11.83□□□□□ -0.52
HNRNPC-232ENST00000557442 CXCL10P02778 98 aa11.83□□□□□ -0.52
HNRNPC-232ENST00000557442 VTNP04004 478 aa11.83□□□□□ -0.52
HNRNPC-232ENST00000557442 SPATA31C1P0DKV0 1188 aa11.83□□□□□ -0.52
HNRNPC-232ENST00000557442 ZSCAN22P10073 491 aaPredicted RBP11.83□□□□□ -0.52
HNRNPC-232ENST00000557442 GHRP10912 638 aa11.83□□□□□ -0.52
HNRNPC-232ENST00000557442 RPA1P27694 616 aa11.83□□□□□ -0.52
HNRNPC-232ENST00000557442 TMOD1P28289 359 aa11.83□□□□□ -0.52
HNRNPC-232ENST00000557442 CCT6AP40227 531 aaKnown RBP11.83□□□□□ -0.52
HNRNPC-232ENST00000557442 POLGP54098 1239 aaPredicted RBP11.83□□□□□ -0.52
HNRNPC-232ENST00000557442 CEBPZQ03701 1054 aaKnown RBP11.83□□□□□ -0.52
HNRNPC-232ENST00000557442 MGAT3Q09327 533 aa11.83□□□□□ -0.52
HNRNPC-232ENST00000557442 PDIA5Q14554 519 aa11.83□□□□□ -0.52
HNRNPC-232ENST00000557442 GPNMBQ14956 572 aa11.83□□□□□ -0.52
HNRNPC-232ENST00000557442 IL17AQ16552 155 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms