RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 SMC3Q9UQE7 1217 aa15.52■□□□□ 0.08
VPS33B-206ENST00000557358 STXBP5LQ9Y2K9 1186 aa15.52■□□□□ 0.08
VPS33B-206ENST00000557358 WDR81Q562E7 1941 aa15.52■□□□□ 0.07
VPS33B-206ENST00000557358 EDIL3O43854 480 aa15.51■□□□□ 0.07
VPS33B-206ENST00000557358 CHRNA1P02708 482 aa15.51■□□□□ 0.07
VPS33B-206ENST00000557358 QARSP47897 775 aaKnown RBP15.51■□□□□ 0.07
VPS33B-206ENST00000557358 TRAPPC10P48553 1259 aa15.51■□□□□ 0.07
VPS33B-206ENST00000557358 CDC42EP1Q00587 391 aa15.51■□□□□ 0.07
VPS33B-206ENST00000557358 MBTPS1Q14703 1052 aa15.51■□□□□ 0.07
VPS33B-206ENST00000557358 NCAPH2Q6IBW4 605 aa15.51■□□□□ 0.07
VPS33B-206ENST00000557358 OTUD6AQ7L8S5 288 aa15.51■□□□□ 0.07
VPS33B-206ENST00000557358 POTEDQ86YR6 584 aa15.51■□□□□ 0.07
VPS33B-206ENST00000557358 MYOCDQ8IZQ8 938 aa15.51■□□□□ 0.07
VPS33B-206ENST00000557358 TNFRSF25Q93038 417 aa15.51■□□□□ 0.07
VPS33B-206ENST00000557358 GJA10Q969M2 543 aa15.51■□□□□ 0.07
VPS33B-206ENST00000557358 CCDC43Q96MW1 224 aaKnown RBP15.51■□□□□ 0.07
VPS33B-206ENST00000557358 SCLT1Q96NL6 688 aa15.51■□□□□ 0.07
VPS33B-206ENST00000557358 FTHL17Q9BXU8 183 aa15.51■□□□□ 0.07
VPS33B-206ENST00000557358 CELF4Q9BZC1 486 aaKnown RBP15.51■□□□□ 0.07
VPS33B-206ENST00000557358 NKX2-4Q9H2Z4 354 aa15.51■□□□□ 0.07
VPS33B-206ENST00000557358 AKT3Q9Y243 479 aa15.51■□□□□ 0.07
VPS33B-206ENST00000557358 GINS2Q9Y248 185 aa15.51■□□□□ 0.07
VPS33B-206ENST00000557358 DDX11L8A8MPP1 907 aa15.5■□□□□ 0.07
VPS33B-206ENST00000557358 PBX2P40425 430 aa15.5■□□□□ 0.07
VPS33B-206ENST00000557358 RABGGTBP53611 331 aa15.5■□□□□ 0.07
VPS33B-206ENST00000557358 PAK2Q13177 524 aa15.5■□□□□ 0.07
VPS33B-206ENST00000557358 GPNMBQ14956 572 aa15.5■□□□□ 0.07
VPS33B-206ENST00000557358 EPHA7Q15375 998 aa15.5■□□□□ 0.07
VPS33B-206ENST00000557358 FBXO47Q5MNV8 452 aa15.5■□□□□ 0.07
VPS33B-206ENST00000557358 MCTP1Q6DN14 999 aa15.5■□□□□ 0.07
VPS33B-206ENST00000557358 EFCAB12Q6NXP0 572 aa15.5■□□□□ 0.07
VPS33B-206ENST00000557358 NOSTRINQ8IVI9 506 aa15.5■□□□□ 0.07
VPS33B-206ENST00000557358 NEK9Q8TD19 979 aa15.5■□□□□ 0.07
VPS33B-206ENST00000557358 VWCEQ96DN2 955 aa15.5■□□□□ 0.07
VPS33B-206ENST00000557358 RAD9AQ99638 391 aa15.5■□□□□ 0.07
VPS33B-206ENST00000557358 PPME1Q9Y570 386 aa15.5■□□□□ 0.07
VPS33B-206ENST00000557358 LAMA2P24043 3122 aaKnown RBP15.5■□□□□ 0.07
VPS33B-206ENST00000557358 KDM3AQ9Y4C1 1321 aa15.49■□□□□ 0.07
VPS33B-206ENST00000557358 C22orf31O95567 290 aa15.49■□□□□ 0.07
VPS33B-206ENST00000557358 FOSL2P15408 326 aa15.49■□□□□ 0.07
VPS33B-206ENST00000557358 ATP4AP20648 1035 aa15.49■□□□□ 0.07
VPS33B-206ENST00000557358 MCM7P33993 719 aa15.49■□□□□ 0.07
VPS33B-206ENST00000557358 TXKP42681 527 aa15.49■□□□□ 0.07
VPS33B-206ENST00000557358 MGAT3Q09327 533 aa15.49■□□□□ 0.07
VPS33B-206ENST00000557358 TMEM62Q0P6H9 643 aa15.49■□□□□ 0.07
VPS33B-206ENST00000557358 TMEM266Q2M3C6 531 aa15.49■□□□□ 0.07
VPS33B-206ENST00000557358 MTERF2Q49AM1 385 aa15.49■□□□□ 0.07
VPS33B-206ENST00000557358 EARS2Q5JPH6 523 aaKnown RBP15.49■□□□□ 0.07
VPS33B-206ENST00000557358 BANK1Q8NDB2 785 aa15.49■□□□□ 0.07
VPS33B-206ENST00000557358 CDX2Q99626 313 aaPredicted RBP15.49■□□□□ 0.07
VPS33B-206ENST00000557358 ZSWIM4Q9H7M6 989 aa15.49■□□□□ 0.07
VPS33B-206ENST00000557358 TTC12Q9H892 705 aaPredicted RBP15.49■□□□□ 0.07
VPS33B-206ENST00000557358 SUGCTQ9HAC7 445 aa15.49■□□□□ 0.07
VPS33B-206ENST00000557358 INSL6Q9Y581 213 aa15.49■□□□□ 0.07
VPS33B-206ENST00000557358 MICAL3Q7RTP6 2002 aa15.49■□□□□ 0.07
VPS33B-206ENST00000557358 FAM205CA6NFA0 338 aa15.48■□□□□ 0.07
VPS33B-206ENST00000557358 GPR182O15218 404 aa15.48■□□□□ 0.07
VPS33B-206ENST00000557358 ZNF862O60290 1169 aa15.48■□□□□ 0.07
VPS33B-206ENST00000557358 RPS6KA5O75582 802 aa15.48■□□□□ 0.07
VPS33B-206ENST00000557358 GJB5O95377 273 aa15.48■□□□□ 0.07
VPS33B-206ENST00000557358 NFX1Q12986 1120 aaKnown RBP15.48■□□□□ 0.07
VPS33B-206ENST00000557358 LPIN1Q14693 890 aa15.48■□□□□ 0.07
VPS33B-206ENST00000557358 B3GNT9Q6UX72 402 aa15.48■□□□□ 0.07
VPS33B-206ENST00000557358 KIAA0319LQ8IZA0 1049 aa15.48■□□□□ 0.07
VPS33B-206ENST00000557358 ERMNQ8TAM6 284 aa15.48■□□□□ 0.07
VPS33B-206ENST00000557358 SLC7A3Q8WY07 619 aa15.48■□□□□ 0.07
VPS33B-206ENST00000557358 HAS1Q92839 578 aa15.48■□□□□ 0.07
VPS33B-206ENST00000557358 YME1L1Q96TA2 773 aa15.48■□□□□ 0.07
VPS33B-206ENST00000557358 NIFKQ9BYG3 293 aaKnown RBP15.48■□□□□ 0.07
VPS33B-206ENST00000557358 RAB34Q9BZG1 259 aa15.48■□□□□ 0.07
VPS33B-206ENST00000557358 TTYH1Q9H313 450 aaPredicted RBP15.48■□□□□ 0.07
VPS33B-206ENST00000557358 VAV3Q9UKW4 847 aa15.48■□□□□ 0.07
VPS33B-206ENST00000557358 GBF1Q92538 1859 aa15.48■□□□□ 0.07
VPS33B-206ENST00000557358 SZT2Q5T011 3432 aa15.47■□□□□ 0.07
VPS33B-206ENST00000557358 ZBTB42B2RXF5 422 aa15.47■□□□□ 0.07
VPS33B-206ENST00000557358 CA3P07451 260 aa15.47■□□□□ 0.07
VPS33B-206ENST00000557358 GJB2P29033 226 aa15.47■□□□□ 0.07
VPS33B-206ENST00000557358 CRYBB1P53674 252 aaPredicted RBP15.47■□□□□ 0.07
VPS33B-206ENST00000557358 DEFB103AP81534 67 aa15.47■□□□□ 0.07
VPS33B-206ENST00000557358 UGCGQ16739 394 aa15.47■□□□□ 0.07
VPS33B-206ENST00000557358 TTC38Q5R3I4 469 aa15.47■□□□□ 0.07
VPS33B-206ENST00000557358 FAM117BQ6P1L5 589 aa15.47■□□□□ 0.07
VPS33B-206ENST00000557358 ZBTB10Q96DT7 871 aa15.47■□□□□ 0.07
VPS33B-206ENST00000557358 CEP170P1Q96L14 293 aa15.47■□□□□ 0.07
VPS33B-206ENST00000557358 LXNQ9BS40 222 aa15.47■□□□□ 0.07
VPS33B-206ENST00000557358 YBX2Q9Y2T7 364 aaKnown RBP15.47■□□□□ 0.07
VPS33B-206ENST00000557358 STK24Q9Y6E0 443 aa15.47■□□□□ 0.07
VPS33B-206ENST00000557358 EML1O00423 815 aa15.46■□□□□ 0.07
VPS33B-206ENST00000557358 GTPBP6O43824 516 aaPredicted RBP15.46■□□□□ 0.07
VPS33B-206ENST00000557358 GAS2O43903 313 aaKnown RBP15.46■□□□□ 0.07
VPS33B-206ENST00000557358 UPP2O95045 317 aa15.46■□□□□ 0.07
VPS33B-206ENST00000557358 OR52Z1P0C646 297 aa15.46■□□□□ 0.07
VPS33B-206ENST00000557358 STAG3L1P0CL83 205 aa15.46■□□□□ 0.07
VPS33B-206ENST00000557358 PDCP20941 246 aa15.46■□□□□ 0.07
VPS33B-206ENST00000557358 CD52P31358 61 aa15.46■□□□□ 0.07
VPS33B-206ENST00000557358 CLCN3P51790 818 aa15.46■□□□□ 0.07
VPS33B-206ENST00000557358 POLGP54098 1239 aaPredicted RBP15.46■□□□□ 0.07
VPS33B-206ENST00000557358 GRIN2CQ14957 1233 aa15.46■□□□□ 0.07
VPS33B-206ENST00000557358 ZNF174Q15697 407 aa15.46■□□□□ 0.07
VPS33B-206ENST00000557358 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms