RNA–Protein interactions for RNA: ENST00000557331.1

RDH11-210, Transcript of retinol dehydrogenase 11, humanhuman

TSL 4

Gene RDH11, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-210ENST00000557331 GLP2RO95838 553 aa11.66□□□□□ -0.54
RDH11-210ENST00000557331 MCM5P33992 734 aa11.66□□□□□ -0.54
RDH11-210ENST00000557331 ACTR2P61160 394 aa11.66□□□□□ -0.54
RDH11-210ENST00000557331 FAM189BP81408 668 aa11.66□□□□□ -0.54
RDH11-210ENST00000557331 MTMR3Q13615 1198 aa11.66□□□□□ -0.54
RDH11-210ENST00000557331 PLCB4Q15147 1175 aa11.66□□□□□ -0.54
RDH11-210ENST00000557331 CEP55Q53EZ4 464 aa11.66□□□□□ -0.54
RDH11-210ENST00000557331 ZNF484Q5JVG2 852 aa11.66□□□□□ -0.54
RDH11-210ENST00000557331 ANKRD54Q6NXT1 300 aa11.66□□□□□ -0.54
RDH11-210ENST00000557331 MTHFD1LQ6UB35 978 aa11.66□□□□□ -0.54
RDH11-210ENST00000557331 PIBF1Q8WXW3 757 aa11.66□□□□□ -0.54
RDH11-210ENST00000557331 MRPS27Q92552 414 aaKnown RBP11.66□□□□□ -0.54
RDH11-210ENST00000557331 CASP10Q92851 521 aa11.66□□□□□ -0.54
RDH11-210ENST00000557331 ASIC4Q96FT7 647 aa11.66□□□□□ -0.54
RDH11-210ENST00000557331 RIPOR3Q96MK2 946 aa11.66□□□□□ -0.54
RDH11-210ENST00000557331 ADAM2Q99965 735 aa11.66□□□□□ -0.54
RDH11-210ENST00000557331 MXRA8Q9BRK3 442 aa11.66□□□□□ -0.54
RDH11-210ENST00000557331 PCDHA6Q9UN73 950 aa11.66□□□□□ -0.54
RDH11-210ENST00000557331 PCDHA8Q9Y5H6 950 aa11.66□□□□□ -0.54
RDH11-210ENST00000557331 TBKBP1A7MCY6 615 aa11.65□□□□□ -0.54
RDH11-210ENST00000557331 C9IYK1 514 aa11.65□□□□□ -0.54
RDH11-210ENST00000557331 hCG_1984214I3L0E3 225 aa11.65□□□□□ -0.54
RDH11-210ENST00000557331 FSCN2O14926 492 aa11.65□□□□□ -0.54
RDH11-210ENST00000557331 GALR2O43603 387 aaPredicted RBP11.65□□□□□ -0.54
RDH11-210ENST00000557331 CRYBB1P53674 252 aaPredicted RBP11.65□□□□□ -0.54
RDH11-210ENST00000557331 MCTP2Q6DN12 878 aa11.65□□□□□ -0.54
RDH11-210ENST00000557331 SYNE3Q6ZMZ3 975 aa11.65□□□□□ -0.54
RDH11-210ENST00000557331 NFXL1Q6ZNB6 911 aa11.65□□□□□ -0.54
RDH11-210ENST00000557331 NIPA1Q7RTP0 329 aa11.65□□□□□ -0.54
RDH11-210ENST00000557331 MB21D2Q8IYB1 491 aaPredicted RBP11.65□□□□□ -0.54
RDH11-210ENST00000557331 ABI1Q8IZP0 508 aa11.65□□□□□ -0.54
RDH11-210ENST00000557331 PLCD3Q8N3E9 789 aa11.65□□□□□ -0.54
RDH11-210ENST00000557331 ZNF713Q8N859 430 aaPredicted RBP11.65□□□□□ -0.54
RDH11-210ENST00000557331 TMEM117Q9H0C3 514 aa11.65□□□□□ -0.54
RDH11-210ENST00000557331 TMX1Q9H3N1 280 aa11.65□□□□□ -0.54
RDH11-210ENST00000557331 LY9Q9HBG7 655 aa11.65□□□□□ -0.54
RDH11-210ENST00000557331 ERVK-5Q9HDB9 667 aa11.65□□□□□ -0.54
RDH11-210ENST00000557331 TYW1Q9NV66 732 aaKnown RBP11.65□□□□□ -0.54
RDH11-210ENST00000557331 STK39Q9UEW8 545 aa11.65□□□□□ -0.54
RDH11-210ENST00000557331 CEP131Q9UPN4 1083 aa11.65□□□□□ -0.54
RDH11-210ENST00000557331 SORCS3Q9UPU3 1222 aa11.65□□□□□ -0.54
RDH11-210ENST00000557331 SUPT16HQ9Y5B9 1047 aaKnown RBP11.65□□□□□ -0.54
RDH11-210ENST00000557331 DOCK5Q9H7D0 1870 aa11.65□□□□□ -0.54
RDH11-210ENST00000557331 MYO15AQ9UKN7 3530 aa11.65□□□□□ -0.54
RDH11-210ENST00000557331 GVINP1Q7Z2Y8 2422 aa11.65□□□□□ -0.55
RDH11-210ENST00000557331 WDR87Q6ZQQ6 2873 aa11.65□□□□□ -0.55
RDH11-210ENST00000557331 ATG2AQ2TAZ0 1938 aa11.64□□□□□ -0.55
RDH11-210ENST00000557331 IGKV6D-21A0A0A0MT36 114 aa11.64□□□□□ -0.55
RDH11-210ENST00000557331 MAGEB2O15479 319 aa11.64□□□□□ -0.55
RDH11-210ENST00000557331 ZSCAN20P17040 1043 aaPredicted RBP11.64□□□□□ -0.55
RDH11-210ENST00000557331 KLRC1P26715 233 aa11.64□□□□□ -0.55
RDH11-210ENST00000557331 TECP42680 631 aa11.64□□□□□ -0.55
RDH11-210ENST00000557331 MTHFRP42898 656 aa11.64□□□□□ -0.55
RDH11-210ENST00000557331 CDC42EP1Q00587 391 aa11.64□□□□□ -0.55
RDH11-210ENST00000557331 TMEM62Q0P6H9 643 aa11.64□□□□□ -0.55
RDH11-210ENST00000557331 AP3B2Q13367 1082 aa11.64□□□□□ -0.55
RDH11-210ENST00000557331 KCNC3Q14003 757 aa11.64□□□□□ -0.55
RDH11-210ENST00000557331 GIT2Q14161 759 aa11.64□□□□□ -0.55
RDH11-210ENST00000557331 PPP1R18Q6NYC8 613 aa11.64□□□□□ -0.55
RDH11-210ENST00000557331 MIS18BP1Q6P0N0 1132 aa11.64□□□□□ -0.55
RDH11-210ENST00000557331 KIAA0319LQ8IZA0 1049 aa11.64□□□□□ -0.55
RDH11-210ENST00000557331 COLGALT1Q8NBJ5 622 aa11.64□□□□□ -0.55
RDH11-210ENST00000557331 MAP4K1Q92918 833 aa11.64□□□□□ -0.55
RDH11-210ENST00000557331 PCYT2Q99447 389 aa11.64□□□□□ -0.55
RDH11-210ENST00000557331 S1PR5Q9H228 398 aa11.64□□□□□ -0.55
RDH11-210ENST00000557331 ENTPD7Q9NQZ7 604 aa11.64□□□□□ -0.55
RDH11-210ENST00000557331 ST3GAL5Q9UNP4 418 aa11.64□□□□□ -0.55
RDH11-210ENST00000557331 USTQ9Y2C2 406 aa11.64□□□□□ -0.55
RDH11-210ENST00000557331 TELO2Q9Y4R8 837 aa11.64□□□□□ -0.55
RDH11-210ENST00000557331 SLC12A7Q9Y666 1083 aa11.64□□□□□ -0.55
RDH11-210ENST00000557331 MYO10Q9HD67 2058 aa11.63□□□□□ -0.55
RDH11-210ENST00000557331 MEIS1O00470 390 aa11.63□□□□□ -0.55
RDH11-210ENST00000557331 BACH1O14867 736 aa11.63□□□□□ -0.55
RDH11-210ENST00000557331 PER2O15055 1255 aa11.63□□□□□ -0.55
RDH11-210ENST00000557331 CSPG5O95196 566 aa11.63□□□□□ -0.55
RDH11-210ENST00000557331 EOMESO95936 686 aa11.63□□□□□ -0.55
RDH11-210ENST00000557331 CHMLP26374 656 aa11.63□□□□□ -0.55
RDH11-210ENST00000557331 TMOD1P28289 359 aa11.63□□□□□ -0.55
RDH11-210ENST00000557331 CLCN5P51795 746 aa11.63□□□□□ -0.55
RDH11-210ENST00000557331 ERVFC1P60507 584 aa11.63□□□□□ -0.55
RDH11-210ENST00000557331 SMC1AQ14683 1233 aaKnown RBP11.63□□□□□ -0.55
RDH11-210ENST00000557331 TTC22Q5TAA0 569 aa11.63□□□□□ -0.55
RDH11-210ENST00000557331 ERMP1Q7Z2K6 904 aa11.63□□□□□ -0.55
RDH11-210ENST00000557331 LRRC43Q8N309 656 aa11.63□□□□□ -0.55
RDH11-210ENST00000557331 SRBD1Q8N5C6 995 aaKnown RBP11.63□□□□□ -0.55
RDH11-210ENST00000557331 FANCBQ8NB91 859 aa11.63□□□□□ -0.55
RDH11-210ENST00000557331 TMEM87AQ8NBN3 555 aa11.63□□□□□ -0.55
RDH11-210ENST00000557331 BBXQ8WY36 941 aaPredicted RBP11.63□□□□□ -0.55
RDH11-210ENST00000557331 ZNF558Q96NG5 402 aa11.63□□□□□ -0.55
RDH11-210ENST00000557331 PHOX2BQ99453 314 aa11.63□□□□□ -0.55
RDH11-210ENST00000557331 TCF25Q9BQ70 676 aa11.63□□□□□ -0.55
RDH11-210ENST00000557331 ADAM7Q9H2U9 754 aa11.63□□□□□ -0.55
RDH11-210ENST00000557331 SENP2Q9HC62 589 aa11.63□□□□□ -0.55
RDH11-210ENST00000557331 RIC8AQ9NPQ8 531 aa11.63□□□□□ -0.55
RDH11-210ENST00000557331 TBC1D22BQ9NU19 505 aa11.63□□□□□ -0.55
RDH11-210ENST00000557331 RBM28Q9NW13 759 aaKnown RBP11.63□□□□□ -0.55
RDH11-210ENST00000557331 SPG21Q9NZD8 308 aa11.63□□□□□ -0.55
RDH11-210ENST00000557331 PKD2L1Q9P0L9 805 aa11.63□□□□□ -0.55
RDH11-210ENST00000557331 TCEAL9Q9UHQ7 104 aa11.63□□□□□ -0.55
RDH11-210ENST00000557331 GINS2Q9Y248 185 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms