RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 EFL1Q7Z2Z2 1120 aaKnown RBP9.41□□□□□ -0.9
SYNE3-205ENST00000557275 ABI1Q8IZP0 508 aa9.41□□□□□ -0.9
SYNE3-205ENST00000557275 APPBP2Q92624 585 aa9.41□□□□□ -0.9
SYNE3-205ENST00000557275 XPO6Q96QU8 1125 aaKnown RBP9.41□□□□□ -0.9
SYNE3-205ENST00000557275 INTUQ9ULD6 942 aa9.41□□□□□ -0.9
SYNE3-205ENST00000557275 PNMA8CA0A1B0GUJ8 204 aa9.41□□□□□ -0.9
SYNE3-205ENST00000557275 ECDO95905 644 aaPredicted RBP9.41□□□□□ -0.9
SYNE3-205ENST00000557275 GCFC2P16383 781 aaKnown RBP9.41□□□□□ -0.9
SYNE3-205ENST00000557275 JAK1P23458 1154 aa9.41□□□□□ -0.9
SYNE3-205ENST00000557275 PKN2Q16513 984 aaKnown RBP9.41□□□□□ -0.9
SYNE3-205ENST00000557275 ODR4Q5SWX8 454 aa9.41□□□□□ -0.9
SYNE3-205ENST00000557275 RCSD1Q6JBY9 416 aa9.41□□□□□ -0.9
SYNE3-205ENST00000557275 STAMQ92783 540 aa9.41□□□□□ -0.9
SYNE3-205ENST00000557275 ALKBH8Q96BT7 664 aaKnown RBP9.41□□□□□ -0.9
SYNE3-205ENST00000557275 ZBTB3Q9H5J0 574 aa9.41□□□□□ -0.9
SYNE3-205ENST00000557275 AIPL1Q9NZN9 384 aa9.41□□□□□ -0.9
SYNE3-205ENST00000557275 PLXNC1O60486 1568 aa9.41□□□□□ -0.9
SYNE3-205ENST00000557275 PSMC2P35998 433 aaKnown RBP9.41□□□□□ -0.9
SYNE3-205ENST00000557275 IQGAP2Q13576 1575 aa9.41□□□□□ -0.9
SYNE3-205ENST00000557275 KRT77Q7Z794 578 aa9.41□□□□□ -0.9
SYNE3-205ENST00000557275 MRPL1Q9BYD6 325 aaKnown RBP9.41□□□□□ -0.9
SYNE3-205ENST00000557275 PCDHB8Q9UN66 801 aa9.41□□□□□ -0.9
SYNE3-205ENST00000557275 GGPS1O95749 300 aa9.41□□□□□ -0.9
SYNE3-205ENST00000557275 PDHA1P08559 390 aa9.41□□□□□ -0.9
SYNE3-205ENST00000557275 RGS9BPQ6ZS82 235 aa9.41□□□□□ -0.9
SYNE3-205ENST00000557275 DPH5Q9H2P9 285 aa9.41□□□□□ -0.9
SYNE3-205ENST00000557275 FOSP01100 380 aaPredicted RBP9.41□□□□□ -0.9
SYNE3-205ENST00000557275 POLGP54098 1239 aaPredicted RBP9.41□□□□□ -0.9
SYNE3-205ENST00000557275 PLTPP55058 493 aa9.41□□□□□ -0.9
SYNE3-205ENST00000557275 PRKCQQ04759 706 aa9.41□□□□□ -0.9
SYNE3-205ENST00000557275 MEI1Q5TIA1 1274 aa9.41□□□□□ -0.9
SYNE3-205ENST00000557275 HMGXB3Q12766 1538 aa9.41□□□□□ -0.9
SYNE3-205ENST00000557275 CENPXA8MT69 81 aa9.41□□□□□ -0.9
SYNE3-205ENST00000557275 DYNC1LI2O43237 492 aaPredicted RBP9.41□□□□□ -0.9
SYNE3-205ENST00000557275 PSMC6P62333 389 aa9.41□□□□□ -0.9
SYNE3-205ENST00000557275 SUPT20HQ8NEM7 779 aa9.41□□□□□ -0.9
SYNE3-205ENST00000557275 NLRC4Q9NPP4 1024 aa9.41□□□□□ -0.9
SYNE3-205ENST00000557275 ANXA11P50995 505 aaKnown RBP9.41□□□□□ -0.9
SYNE3-205ENST00000557275 FKBP3Q00688 224 aaKnown RBP9.41□□□□□ -0.9
SYNE3-205ENST00000557275 ADCK5Q3MIX3 580 aa9.41□□□□□ -0.9
SYNE3-205ENST00000557275 ITPRIPL1Q6GPH6 555 aa9.41□□□□□ -0.9
SYNE3-205ENST00000557275 CDH24Q86UP0 819 aa9.41□□□□□ -0.9
SYNE3-205ENST00000557275 PSD3Q9NYI0 1048 aa9.41□□□□□ -0.9
SYNE3-205ENST00000557275 ADA2Q9NZK5 511 aa9.41□□□□□ -0.9
SYNE3-205ENST00000557275 GPTP24298 496 aa9.41□□□□□ -0.9
SYNE3-205ENST00000557275 AKAP5P24588 427 aa9.41□□□□□ -0.9
SYNE3-205ENST00000557275 PSMD2Q13200 908 aa9.41□□□□□ -0.9
SYNE3-205ENST00000557275 SRLQ86TD4 932 aa9.41□□□□□ -0.9
SYNE3-205ENST00000557275 AFAP1Q8N556 730 aa9.41□□□□□ -0.9
SYNE3-205ENST00000557275 NFIBO00712 420 aa9.4□□□□□ -0.9
SYNE3-205ENST00000557275 DNAJC6O75061 913 aa9.4□□□□□ -0.9
SYNE3-205ENST00000557275 RGS20O76081 388 aa9.4□□□□□ -0.9
SYNE3-205ENST00000557275 EPHB1P54762 984 aa9.4□□□□□ -0.9
SYNE3-205ENST00000557275 ADKP55263 362 aaKnown RBP9.4□□□□□ -0.9
SYNE3-205ENST00000557275 RBM17Q96I25 401 aaKnown RBP9.4□□□□□ -0.9
SYNE3-205ENST00000557275 RGL1Q9NZL6 768 aa9.4□□□□□ -0.9
SYNE3-205ENST00000557275 EPS8Q12929 822 aa9.4□□□□□ -0.9
SYNE3-205ENST00000557275 NUP160Q12769 1436 aa9.4□□□□□ -0.9
SYNE3-205ENST00000557275 C5orf58C9J3I9 102 aa9.4□□□□□ -0.9
SYNE3-205ENST00000557275 HNRNPDLO14979 420 aaKnown RBP9.4□□□□□ -0.9
SYNE3-205ENST00000557275 RNF219Q5W0B1 726 aaPredicted RBP9.4□□□□□ -0.9
SYNE3-205ENST00000557275 BTNL9Q6UXG8 535 aa9.4□□□□□ -0.9
SYNE3-205ENST00000557275 COG1Q8WTW3 980 aa9.4□□□□□ -0.9
SYNE3-205ENST00000557275 OTULINQ96BN8 352 aa9.4□□□□□ -0.9
SYNE3-205ENST00000557275 YIPF3Q9GZM5 350 aa9.4□□□□□ -0.9
SYNE3-205ENST00000557275 MRPL11Q9Y3B7 192 aaKnown RBP9.4□□□□□ -0.9
SYNE3-205ENST00000557275 ATP10DQ9P241 1426 aa9.4□□□□□ -0.9
SYNE3-205ENST00000557275 MAP3K1Q13233 1512 aa9.4□□□□□ -0.9
SYNE3-205ENST00000557275 TNPO2O14787 897 aaKnown RBP9.4□□□□□ -0.9
SYNE3-205ENST00000557275 HAUS5O94927 633 aa9.4□□□□□ -0.9
SYNE3-205ENST00000557275 CAPZA2P47755 286 aa9.4□□□□□ -0.9
SYNE3-205ENST00000557275 FAM135BQ49AJ0 1406 aa9.4□□□□□ -0.9
SYNE3-205ENST00000557275 E5RI56 91 aa9.4□□□□□ -0.9
SYNE3-205ENST00000557275 SH3TC2Q8TF17 1288 aa9.4□□□□□ -0.9
SYNE3-205ENST00000557275 TRPC7Q9HCX4 862 aa9.4□□□□□ -0.9
SYNE3-205ENST00000557275 WDR7Q9Y4E6 1490 aa9.4□□□□□ -0.9
SYNE3-205ENST00000557275 A0A0G2JND7 137 aa9.4□□□□□ -0.9
SYNE3-205ENST00000557275 GRID2IPA4D2P6 1211 aa9.4□□□□□ -0.9
SYNE3-205ENST00000557275 KRT20P35900 424 aa9.4□□□□□ -0.9
SYNE3-205ENST00000557275 WLSQ5T9L3 541 aa9.4□□□□□ -0.9
SYNE3-205ENST00000557275 METTL13Q8N6R0 699 aa9.4□□□□□ -0.9
SYNE3-205ENST00000557275 CCNYQ8ND76 341 aa9.4□□□□□ -0.9
SYNE3-205ENST00000557275 PPHLN1Q8NEY8 458 aaKnown RBP9.4□□□□□ -0.9
SYNE3-205ENST00000557275 CYP4F22Q6NT55 531 aa9.4□□□□□ -0.9
SYNE3-205ENST00000557275 VPS37AQ8NEZ2 397 aa9.4□□□□□ -0.9
SYNE3-205ENST00000557275 RAPGEF5Q92565 580 aa9.4□□□□□ -0.9
SYNE3-205ENST00000557275 FHDC1Q9C0D6 1143 aaPredicted RBP9.4□□□□□ -0.9
SYNE3-205ENST00000557275 ATG3Q9NT62 314 aa9.4□□□□□ -0.9
SYNE3-205ENST00000557275 ADGRA3Q8IWK6 1321 aa9.4□□□□□ -0.9
SYNE3-205ENST00000557275 CASP8Q14790 479 aa9.4□□□□□ -0.91
SYNE3-205ENST00000557275 APOL4Q9BPW4 351 aa9.4□□□□□ -0.91
SYNE3-205ENST00000557275 SMG5Q9UPR3 1016 aaKnown RBP9.4□□□□□ -0.91
SYNE3-205ENST00000557275 MROH5Q6ZUA9 1318 aa9.4□□□□□ -0.91
SYNE3-205ENST00000557275 FAM25AB3EWG3 89 aa9.4□□□□□ -0.91
SYNE3-205ENST00000557275 FAM25CB3EWG5 89 aa9.4□□□□□ -0.91
SYNE3-205ENST00000557275 FAM25GB3EWG6 89 aa9.4□□□□□ -0.91
SYNE3-205ENST00000557275 CCND1P24385 295 aa9.4□□□□□ -0.91
SYNE3-205ENST00000557275 ADAM9Q13443 819 aa9.4□□□□□ -0.91
SYNE3-205ENST00000557275 SMIM31A0A1B0GVY4 71 aa9.4□□□□□ -0.91
SYNE3-205ENST00000557275 XPO1O14980 1071 aaKnown RBP9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms