RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 AFAP1L1Q8TED9 768 aa16.75■□□□□ 0.27
TMEM55B-207ENST00000557041 CEP63Q96MT8 703 aa16.75■□□□□ 0.27
TMEM55B-207ENST00000557041 CTTNBP2NLQ9P2B4 639 aa16.75■□□□□ 0.27
TMEM55B-207ENST00000557041 PRDM4Q9UKN5 801 aa16.75■□□□□ 0.27
TMEM55B-207ENST00000557041 FAM184BQ9ULE4 1060 aa16.75■□□□□ 0.27
TMEM55B-207ENST00000557041 L1RE1Q9UN81 338 aa16.75■□□□□ 0.27
TMEM55B-207ENST00000557041 IGKV6D-41A0A0C4DH26 115 aa16.74■□□□□ 0.27
TMEM55B-207ENST00000557041 KRT5P13647 590 aa16.74■□□□□ 0.27
TMEM55B-207ENST00000557041 DPEP1P16444 411 aa16.74■□□□□ 0.27
TMEM55B-207ENST00000557041 ARHGEF16Q5VV41 709 aa16.74■□□□□ 0.27
TMEM55B-207ENST00000557041 NACC1Q96RE7 527 aa16.74■□□□□ 0.27
TMEM55B-207ENST00000557041 KIFC3Q9BVG8 833 aa16.74■□□□□ 0.27
TMEM55B-207ENST00000557041 WDR11Q9BZH6 1224 aa16.74■□□□□ 0.27
TMEM55B-207ENST00000557041 GPRC5CQ9NQ84 441 aa16.74■□□□□ 0.27
TMEM55B-207ENST00000557041 LARSQ9P2J5 1176 aaKnown RBP16.74■□□□□ 0.27
TMEM55B-207ENST00000557041 MYH15Q9Y2K3 1946 aa16.74■□□□□ 0.27
TMEM55B-207ENST00000557041 TLDC2A0PJX2 215 aa16.74■□□□□ 0.27
TMEM55B-207ENST00000557041 NPEPPSP55786 919 aa16.74■□□□□ 0.27
TMEM55B-207ENST00000557041 TRAF1Q13077 416 aa16.74■□□□□ 0.27
TMEM55B-207ENST00000557041 SYT2Q8N9I0 419 aaPredicted RBP16.74■□□□□ 0.27
TMEM55B-207ENST00000557041 UBE2TQ9NPD8 197 aaPredicted RBP16.74■□□□□ 0.27
TMEM55B-207ENST00000557041 LRP5O75197 1615 aa16.74■□□□□ 0.27
TMEM55B-207ENST00000557041 SPDYE2BA6NHP3 402 aa16.73■□□□□ 0.27
TMEM55B-207ENST00000557041 SLC16A4O15374 487 aa16.73■□□□□ 0.27
TMEM55B-207ENST00000557041 SPDYE6P0CI01 402 aa16.73■□□□□ 0.27
TMEM55B-207ENST00000557041 KIAA1755Q5JYT7 1200 aa16.73■□□□□ 0.27
TMEM55B-207ENST00000557041 RSBN1LQ6PCB5 846 aaPredicted RBP16.73■□□□□ 0.27
TMEM55B-207ENST00000557041 PADI6Q6TGC4 694 aa16.73■□□□□ 0.27
TMEM55B-207ENST00000557041 AKT1S1Q96B36 256 aa16.73■□□□□ 0.27
TMEM55B-207ENST00000557041 NUCKS1Q9H1E3 243 aaKnown RBP16.73■□□□□ 0.27
TMEM55B-207ENST00000557041 DNAJC12Q9UKB3 198 aa16.73■□□□□ 0.27
TMEM55B-207ENST00000557041 KRIT1O00522 736 aa16.73■□□□□ 0.27
TMEM55B-207ENST00000557041 ZBTB22O15209 634 aa16.73■□□□□ 0.27
TMEM55B-207ENST00000557041 PRELPP51888 382 aa16.73■□□□□ 0.27
TMEM55B-207ENST00000557041 SLC12A3P55017 1021 aa16.73■□□□□ 0.27
TMEM55B-207ENST00000557041 TUBB4BP68371 445 aa16.73■□□□□ 0.27
TMEM55B-207ENST00000557041 ZNF211Q13398 564 aaPredicted RBP16.73■□□□□ 0.27
TMEM55B-207ENST00000557041 TRIM59Q8IWR1 403 aa16.73■□□□□ 0.27
TMEM55B-207ENST00000557041 UBLCP1Q8WVY7 318 aaPredicted RBP16.73■□□□□ 0.27
TMEM55B-207ENST00000557041 HIP1RO75146 1068 aa16.73■□□□□ 0.27
TMEM55B-207ENST00000557041 SPATA31C1P0DKV0 1188 aa16.73■□□□□ 0.27
TMEM55B-207ENST00000557041 PLA2G4FQ68DD2 849 aa16.73■□□□□ 0.27
TMEM55B-207ENST00000557041 EEPD1Q7L9B9 569 aa16.73■□□□□ 0.27
TMEM55B-207ENST00000557041 FAM76AQ8TAV0 307 aa16.73■□□□□ 0.27
TMEM55B-207ENST00000557041 SAAL1Q96ER3 474 aa16.73■□□□□ 0.27
TMEM55B-207ENST00000557041 TTYH3Q9C0H2 523 aa16.73■□□□□ 0.27
TMEM55B-207ENST00000557041 EHD4Q9H223 541 aa16.73■□□□□ 0.27
TMEM55B-207ENST00000557041 KCNMB3Q9NPA1 279 aa16.73■□□□□ 0.27
TMEM55B-207ENST00000557041 TYW1Q9NV66 732 aaKnown RBP16.73■□□□□ 0.27
TMEM55B-207ENST00000557041 USP20Q9Y2K6 914 aa16.73■□□□□ 0.27
TMEM55B-207ENST00000557041 EYA4O95677 639 aa16.72■□□□□ 0.27
TMEM55B-207ENST00000557041 SREBF1P36956 1147 aa16.72■□□□□ 0.27
TMEM55B-207ENST00000557041 IFFO1Q0D2I5 559 aa16.72■□□□□ 0.27
TMEM55B-207ENST00000557041 DRAP1Q14919 205 aaPredicted RBP16.72■□□□□ 0.27
TMEM55B-207ENST00000557041 WDR18Q9BV38 432 aa16.72■□□□□ 0.27
TMEM55B-207ENST00000557041 IDI2Q9BXS1 227 aa16.72■□□□□ 0.27
TMEM55B-207ENST00000557041 DDX47Q9H0S4 455 aaKnown RBP16.72■□□□□ 0.27
TMEM55B-207ENST00000557041 METTL14Q9HCE5 456 aaKnown RBP16.72■□□□□ 0.27
TMEM55B-207ENST00000557041 ASNSP08243 561 aa16.72■□□□□ 0.27
TMEM55B-207ENST00000557041 INPP5BP32019 993 aa16.72■□□□□ 0.27
TMEM55B-207ENST00000557041 SOX10P56693 466 aa16.72■□□□□ 0.27
TMEM55B-207ENST00000557041 MYL7Q01449 175 aa16.72■□□□□ 0.27
TMEM55B-207ENST00000557041 SLC15A2Q16348 729 aa16.72■□□□□ 0.27
TMEM55B-207ENST00000557041 SLC18A3Q16572 532 aa16.72■□□□□ 0.27
TMEM55B-207ENST00000557041 BAP1Q92560 729 aa16.72■□□□□ 0.27
TMEM55B-207ENST00000557041 FAM84AQ96KN4 292 aa16.72■□□□□ 0.27
TMEM55B-207ENST00000557041 TCHPQ9BT92 498 aa16.72■□□□□ 0.27
TMEM55B-207ENST00000557041 TUBBP07437 444 aa16.72■□□□□ 0.27
TMEM55B-207ENST00000557041 COPB2P35606 906 aa16.72■□□□□ 0.27
TMEM55B-207ENST00000557041 AMPD2Q01433 879 aa16.72■□□□□ 0.27
TMEM55B-207ENST00000557041 IFI16Q16666 785 aaKnown RBP16.72■□□□□ 0.27
TMEM55B-207ENST00000557041 RPGRIP1Q96KN7 1286 aa16.72■□□□□ 0.27
TMEM55B-207ENST00000557041 RMDN3Q96TC7 470 aa16.72■□□□□ 0.27
TMEM55B-207ENST00000557041 UNC45AQ9H3U1 944 aa16.72■□□□□ 0.27
TMEM55B-207ENST00000557041 VCPKMTQ9H867 229 aa16.72■□□□□ 0.27
TMEM55B-207ENST00000557041 ATP8B1O43520 1251 aa16.71■□□□□ 0.27
TMEM55B-207ENST00000557041 HMGB2P26583 209 aaKnown RBP16.71■□□□□ 0.27
TMEM55B-207ENST00000557041 SSTR3P32745 418 aaPredicted RBP16.71■□□□□ 0.27
TMEM55B-207ENST00000557041 TNNC1P63316 161 aa16.71■□□□□ 0.27
TMEM55B-207ENST00000557041 CCDC25Q86WR0 208 aa16.71■□□□□ 0.27
TMEM55B-207ENST00000557041 DDX42Q86XP3 938 aaKnown RBP eCLIP16.71■□□□□ 0.27
TMEM55B-207ENST00000557041 IFT20Q8IY31 132 aa16.71■□□□□ 0.27
TMEM55B-207ENST00000557041 HERC5Q9UII4 1024 aaKnown RBP16.71■□□□□ 0.27
TMEM55B-207ENST00000557041 ANO9A1A5B4 782 aa16.71■□□□□ 0.27
TMEM55B-207ENST00000557041 TLR2O60603 784 aa16.71■□□□□ 0.27
TMEM55B-207ENST00000557041 ENTPD3O75355 529 aa16.71■□□□□ 0.27
TMEM55B-207ENST00000557041 SLITRK3O94933 977 aa16.71■□□□□ 0.27
TMEM55B-207ENST00000557041 PON1P27169 355 aa16.71■□□□□ 0.27
TMEM55B-207ENST00000557041 MTMR1Q13613 665 aa16.71■□□□□ 0.27
TMEM55B-207ENST00000557041 MTMR2Q13614 643 aa16.71■□□□□ 0.27
TMEM55B-207ENST00000557041 ZNF772Q68DY9 489 aaPredicted RBP16.71■□□□□ 0.27
TMEM55B-207ENST00000557041 ZNF571Q7Z3V5 609 aaPredicted RBP16.71■□□□□ 0.27
TMEM55B-207ENST00000557041 MYH10P35580 1976 aa16.71■□□□□ 0.26
TMEM55B-207ENST00000557041 TIAM2Q8IVF5 1701 aa16.71■□□□□ 0.26
TMEM55B-207ENST00000557041 A0A1W2PQJ5 194 aa16.71■□□□□ 0.26
TMEM55B-207ENST00000557041 CARSP49589 748 aaKnown RBP16.71■□□□□ 0.26
TMEM55B-207ENST00000557041 CLK2P49760 499 aaKnown RBP16.71■□□□□ 0.26
TMEM55B-207ENST00000557041 MAP2K1Q02750 393 aaPredicted RBP16.71■□□□□ 0.26
TMEM55B-207ENST00000557041 BIRC3Q13489 604 aa16.71■□□□□ 0.26
TMEM55B-207ENST00000557041 PAPD7Q5XG87 772 aaKnown RBP16.71■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms