RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 ERO1AQ96HE7 468 aa6.94□□□□□ -1.3
CPSF2-205ENST00000556622 CTAGE1Q96RT6 745 aa6.94□□□□□ -1.3
CPSF2-205ENST00000556622 ANKRD2Q9GZV1 360 aa6.94□□□□□ -1.3
CPSF2-205ENST00000556622 OSBPL5Q9H0X9 879 aaPredicted RBP6.94□□□□□ -1.3
CPSF2-205ENST00000556622 PODXL2Q9NZ53 605 aa6.94□□□□□ -1.3
CPSF2-205ENST00000556622 OGFRQ9NZT2 677 aa6.94□□□□□ -1.3
CPSF2-205ENST00000556622 CRIM1Q9NZV1 1036 aa6.94□□□□□ -1.3
CPSF2-205ENST00000556622 HACL1Q9UJ83 578 aa6.94□□□□□ -1.3
CPSF2-205ENST00000556622 CYP8B1Q9UNU6 501 aa6.94□□□□□ -1.3
CPSF2-205ENST00000556622 SLC12A7Q9Y666 1083 aa6.94□□□□□ -1.3
CPSF2-205ENST00000556622 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.94□□□□□ -1.3
CPSF2-205ENST00000556622 MAST3O60307 1309 aa6.94□□□□□ -1.3
CPSF2-205ENST00000556622 XDHP47989 1333 aa6.94□□□□□ -1.3
CPSF2-205ENST00000556622 LAMB2P55268 1798 aa6.93□□□□□ -1.3
CPSF2-205ENST00000556622 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.93□□□□□ -1.3
CPSF2-205ENST00000556622 JAK2O60674 1132 aa6.93□□□□□ -1.3
CPSF2-205ENST00000556622 KIF20AO95235 890 aa6.93□□□□□ -1.3
CPSF2-205ENST00000556622 PDE8BO95263 885 aa6.93□□□□□ -1.3
CPSF2-205ENST00000556622 FGAP02671 866 aa6.93□□□□□ -1.3
CPSF2-205ENST00000556622 PTGS1P23219 599 aa6.93□□□□□ -1.3
CPSF2-205ENST00000556622 MAP4P27816 1152 aaKnown RBP6.93□□□□□ -1.3
CPSF2-205ENST00000556622 SYKP43405 635 aa6.93□□□□□ -1.3
CPSF2-205ENST00000556622 ST13P50502 369 aaKnown RBP6.93□□□□□ -1.3
CPSF2-205ENST00000556622 MYL5Q02045 173 aa6.93□□□□□ -1.3
CPSF2-205ENST00000556622 ST3GAL1Q11201 340 aa6.93□□□□□ -1.3
CPSF2-205ENST00000556622 FSTL1Q12841 308 aa6.93□□□□□ -1.3
CPSF2-205ENST00000556622 SNW1Q13573 536 aaKnown RBP6.93□□□□□ -1.3
CPSF2-205ENST00000556622 IQCB1Q15051 598 aa6.93□□□□□ -1.3
CPSF2-205ENST00000556622 SLC9C2Q5TAH2 1124 aa6.93□□□□□ -1.3
CPSF2-205ENST00000556622 CDPF1Q6NVV7 123 aa6.93□□□□□ -1.3
CPSF2-205ENST00000556622 MFSD6Q6ZSS7 791 aa6.93□□□□□ -1.3
CPSF2-205ENST00000556622 CERS3Q8IU89 383 aa6.93□□□□□ -1.3
CPSF2-205ENST00000556622 SMC1BQ8NDV3 1235 aa6.93□□□□□ -1.3
CPSF2-205ENST00000556622 KLHDC4Q8TBB5 520 aa6.93□□□□□ -1.3
CPSF2-205ENST00000556622 WDR89Q96FK6 387 aaPredicted RBP6.93□□□□□ -1.3
CPSF2-205ENST00000556622 PGBD1Q96JS3 809 aa6.93□□□□□ -1.3
CPSF2-205ENST00000556622 GPR101Q96P66 508 aaPredicted RBP6.93□□□□□ -1.3
CPSF2-205ENST00000556622 NAPBQ9H115 298 aa6.93□□□□□ -1.3
CPSF2-205ENST00000556622 FOXP1Q9H334 677 aaPredicted RBP6.93□□□□□ -1.3
CPSF2-205ENST00000556622 DBNDD1Q9H9R9 158 aa6.93□□□□□ -1.3
CPSF2-205ENST00000556622 PPP1R9AQ9ULJ8 1098 aa6.93□□□□□ -1.3
CPSF2-205ENST00000556622 PCDHA7Q9UN72 937 aa6.93□□□□□ -1.3
CPSF2-205ENST00000556622 SAMM50Q9Y512 469 aa6.93□□□□□ -1.3
CPSF2-205ENST00000556622 ACTL7BQ9Y614 415 aa6.93□□□□□ -1.3
CPSF2-205ENST00000556622 ZNF541Q9H0D2 1346 aa6.93□□□□□ -1.3
CPSF2-205ENST00000556622 RTL9Q8NET4 1388 aa6.93□□□□□ -1.3
CPSF2-205ENST00000556622 DDX60Q8IY21 1712 aaKnown RBP6.93□□□□□ -1.3
CPSF2-205ENST00000556622 FAM237AA0A1B0GTK4 181 aa6.92□□□□□ -1.3
CPSF2-205ENST00000556622 H7C1D1 291 aa6.92□□□□□ -1.3
CPSF2-205ENST00000556622 TMPRSS2O15393 492 aa6.92□□□□□ -1.3
CPSF2-205ENST00000556622 GPAA1O43292 621 aa6.92□□□□□ -1.3
CPSF2-205ENST00000556622 ATP8B1O43520 1251 aa6.92□□□□□ -1.3
CPSF2-205ENST00000556622 PAGE1O75459 146 aa6.92□□□□□ -1.3
CPSF2-205ENST00000556622 ZNF202O95125 648 aa6.92□□□□□ -1.3
CPSF2-205ENST00000556622 DEXIO95424 95 aa6.92□□□□□ -1.3
CPSF2-205ENST00000556622 SERPINC1P01008 464 aa6.92□□□□□ -1.3
CPSF2-205ENST00000556622 CTSHP09668 335 aa6.92□□□□□ -1.3
CPSF2-205ENST00000556622 SLFN14P0C7P3 912 aa6.92□□□□□ -1.3
CPSF2-205ENST00000556622 U2AF2P26368 475 aaKnown RBP eCLIP6.92□□□□□ -1.3
CPSF2-205ENST00000556622 EPHX2P34913 555 aa6.92□□□□□ -1.3
CPSF2-205ENST00000556622 ADD2P35612 726 aa6.92□□□□□ -1.3
CPSF2-205ENST00000556622 EPS15P42566 896 aa6.92□□□□□ -1.3
CPSF2-205ENST00000556622 CCT2P78371 535 aaKnown RBP6.92□□□□□ -1.3
CPSF2-205ENST00000556622 RBM10P98175 930 aaKnown RBP6.92□□□□□ -1.3
CPSF2-205ENST00000556622 CHRNDQ07001 517 aa6.92□□□□□ -1.3
CPSF2-205ENST00000556622 FILIP1LQ4L180 1135 aa6.92□□□□□ -1.3
CPSF2-205ENST00000556622 JAKMIP3Q5VZ66 844 aa6.92□□□□□ -1.3
CPSF2-205ENST00000556622 SEZ6L2Q6UXD5 910 aa6.92□□□□□ -1.3
CPSF2-205ENST00000556622 FILIP1Q7Z7B0 1213 aa6.92□□□□□ -1.3
CPSF2-205ENST00000556622 PNMA8AQ86V59 439 aaPredicted RBP6.92□□□□□ -1.3
CPSF2-205ENST00000556622 MB21D2Q8IYB1 491 aaPredicted RBP6.92□□□□□ -1.3
CPSF2-205ENST00000556622 ANKRD7Q92527 254 aa6.92□□□□□ -1.3
CPSF2-205ENST00000556622 USP28Q96RU2 1077 aa6.92□□□□□ -1.3
CPSF2-205ENST00000556622 ALG1Q9BT22 464 aa6.92□□□□□ -1.3
CPSF2-205ENST00000556622 NAA15Q9BXJ9 866 aaKnown RBP6.92□□□□□ -1.3
CPSF2-205ENST00000556622 OSBPL1AQ9BXW6 950 aa6.92□□□□□ -1.3
CPSF2-205ENST00000556622 TAF1DQ9H5J8 278 aaPredicted RBP6.92□□□□□ -1.3
CPSF2-205ENST00000556622 ACSS3Q9H6R3 686 aa6.92□□□□□ -1.3
CPSF2-205ENST00000556622 PAK6Q9NQU5 681 aaPredicted RBP6.92□□□□□ -1.3
CPSF2-205ENST00000556622 KCNQ5Q9NR82 932 aa6.92□□□□□ -1.3
CPSF2-205ENST00000556622 RAD18Q9NS91 495 aa6.92□□□□□ -1.3
CPSF2-205ENST00000556622 RBM28Q9NW13 759 aaKnown RBP6.92□□□□□ -1.3
CPSF2-205ENST00000556622 WTIPA6NIX2 430 aaPredicted RBP6.91□□□□□ -1.3
CPSF2-205ENST00000556622 YDJCA8MPS7 323 aa6.91□□□□□ -1.3
CPSF2-205ENST00000556622 PSMD14O00487 310 aa6.91□□□□□ -1.3
CPSF2-205ENST00000556622 GAS2O43903 313 aaKnown RBP6.91□□□□□ -1.3
CPSF2-205ENST00000556622 ECE2O60344 883 aa6.91□□□□□ -1.3
CPSF2-205ENST00000556622 SLU7O95391 586 aaKnown RBP6.91□□□□□ -1.3
CPSF2-205ENST00000556622 HSPA6P17066 643 aa6.91□□□□□ -1.3
CPSF2-205ENST00000556622 IFNAR1P17181 557 aa6.91□□□□□ -1.3
CPSF2-205ENST00000556622 CDK11BP21127 795 aaKnown RBP6.91□□□□□ -1.3
CPSF2-205ENST00000556622 ERCC5P28715 1186 aaPredicted RBP6.91□□□□□ -1.3
CPSF2-205ENST00000556622 PPP1R2P41236 205 aa6.91□□□□□ -1.3
CPSF2-205ENST00000556622 GMPSP49915 693 aaPredicted RBP6.91□□□□□ -1.3
CPSF2-205ENST00000556622 RPS26P62854 115 aaKnown RBP6.91□□□□□ -1.3
CPSF2-205ENST00000556622 TAGLNQ01995 201 aaKnown RBP6.91□□□□□ -1.3
CPSF2-205ENST00000556622 CEBPZQ03701 1054 aaKnown RBP6.91□□□□□ -1.3
CPSF2-205ENST00000556622 GABPB1Q06547 395 aaPredicted RBP6.91□□□□□ -1.3
CPSF2-205ENST00000556622 RING1Q06587 406 aa6.91□□□□□ -1.3
CPSF2-205ENST00000556622 GPS2Q13227 327 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms