RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 MIER3Q7Z3K6 550 aa9.15□□□□□ -0.94
VTI1B-206ENST00000556461 RSPH3Q86UC2 560 aa9.15□□□□□ -0.94
VTI1B-206ENST00000556461 POTEDQ86YR6 584 aa9.15□□□□□ -0.94
VTI1B-206ENST00000556461 DIS3L2Q8IYB7 885 aaKnown RBP9.15□□□□□ -0.94
VTI1B-206ENST00000556461 MYOCDQ8IZQ8 938 aa9.15□□□□□ -0.94
VTI1B-206ENST00000556461 LINC01465Q8N7H1 131 aa9.15□□□□□ -0.94
VTI1B-206ENST00000556461 MAFAQ8NHW3 353 aaPredicted RBP9.15□□□□□ -0.94
VTI1B-206ENST00000556461 BBXQ8WY36 941 aaPredicted RBP9.15□□□□□ -0.94
VTI1B-206ENST00000556461 CEP89Q96ST8 783 aa9.15□□□□□ -0.94
VTI1B-206ENST00000556461 SH2D3AQ9BRG2 576 aa9.15□□□□□ -0.94
VTI1B-206ENST00000556461 IFIH1Q9BYX4 1025 aaKnown RBP9.15□□□□□ -0.94
VTI1B-206ENST00000556461 TCEAL9Q9UHQ7 104 aa9.15□□□□□ -0.94
VTI1B-206ENST00000556461 TRPV2Q9Y5S1 764 aa9.15□□□□□ -0.94
VTI1B-206ENST00000556461 XIRP2A4UGR9 3374 aa9.15□□□□□ -0.94
VTI1B-206ENST00000556461 COL1A2P08123 1366 aa9.14□□□□□ -0.95
VTI1B-206ENST00000556461 ENPP3O14638 875 aa9.14□□□□□ -0.95
VTI1B-206ENST00000556461 EFCAB14O75071 495 aa9.14□□□□□ -0.95
VTI1B-206ENST00000556461 UPP2O95045 317 aa9.14□□□□□ -0.95
VTI1B-206ENST00000556461 SFNP31947 248 aa9.14□□□□□ -0.95
VTI1B-206ENST00000556461 CLCN3P51790 818 aa9.14□□□□□ -0.95
VTI1B-206ENST00000556461 JAK3P52333 1124 aa9.14□□□□□ -0.95
VTI1B-206ENST00000556461 RABEP1Q15276 862 aa9.14□□□□□ -0.95
VTI1B-206ENST00000556461 TMEM266Q2M3C6 531 aa9.14□□□□□ -0.95
VTI1B-206ENST00000556461 IER5Q5VY09 327 aa9.14□□□□□ -0.95
VTI1B-206ENST00000556461 TSHZ1Q6ZSZ6 1077 aa9.14□□□□□ -0.95
VTI1B-206ENST00000556461 RTN4RL1Q86UN2 441 aaPredicted RBP9.14□□□□□ -0.95
VTI1B-206ENST00000556461 LRRC71Q8N4P6 559 aa9.14□□□□□ -0.95
VTI1B-206ENST00000556461 BANK1Q8NDB2 785 aa9.14□□□□□ -0.95
VTI1B-206ENST00000556461 TMEM40Q8WWA1 233 aa9.14□□□□□ -0.95
VTI1B-206ENST00000556461 ARNTL2Q8WYA1 636 aa9.14□□□□□ -0.95
VTI1B-206ENST00000556461 ZNF668Q96K58 619 aaPredicted RBP9.14□□□□□ -0.95
VTI1B-206ENST00000556461 ZSCAN31Q96LW9 406 aaPredicted RBP9.14□□□□□ -0.95
VTI1B-206ENST00000556461 RAD9AQ99638 391 aa9.14□□□□□ -0.95
VTI1B-206ENST00000556461 LLPHQ9BRT6 129 aaKnown RBP9.14□□□□□ -0.95
VTI1B-206ENST00000556461 ZBED2Q9BTP6 218 aa9.14□□□□□ -0.95
VTI1B-206ENST00000556461 CELF4Q9BZC1 486 aaKnown RBP9.14□□□□□ -0.95
VTI1B-206ENST00000556461 TMX1Q9H3N1 280 aa9.14□□□□□ -0.95
VTI1B-206ENST00000556461 WRAP73Q9P2S5 460 aaPredicted RBP9.14□□□□□ -0.95
VTI1B-206ENST00000556461 MICAL3Q7RTP6 2002 aa9.14□□□□□ -0.95
VTI1B-206ENST00000556461 KIF28PB7ZC32 967 aa9.13□□□□□ -0.95
VTI1B-206ENST00000556461 MGEA5O60502 916 aa9.13□□□□□ -0.95
VTI1B-206ENST00000556461 GPR32O75388 356 aa9.13□□□□□ -0.95
VTI1B-206ENST00000556461 AMHP03971 560 aa9.13□□□□□ -0.95
VTI1B-206ENST00000556461 VTNP04004 478 aa9.13□□□□□ -0.95
VTI1B-206ENST00000556461 GCFC2P16383 781 aaKnown RBP9.13□□□□□ -0.95
VTI1B-206ENST00000556461 ATP2B1P20020 1258 aa9.13□□□□□ -0.95
VTI1B-206ENST00000556461 IGFBP4P22692 258 aa9.13□□□□□ -0.95
VTI1B-206ENST00000556461 HTRA4P83105 476 aaPredicted RBP9.13□□□□□ -0.95
VTI1B-206ENST00000556461 SPIRE1Q08AE8 756 aa9.13□□□□□ -0.95
VTI1B-206ENST00000556461 PPP2R5CQ13362 524 aa9.13□□□□□ -0.95
VTI1B-206ENST00000556461 DRP2Q13474 957 aa9.13□□□□□ -0.95
VTI1B-206ENST00000556461 TARBP2Q15633 366 aaKnown RBP9.13□□□□□ -0.95
VTI1B-206ENST00000556461 KIZQ2M2Z5 673 aa9.13□□□□□ -0.95
VTI1B-206ENST00000556461 NME8Q8N427 588 aa9.13□□□□□ -0.95
VTI1B-206ENST00000556461 METTL13Q8N6R0 699 aa9.13□□□□□ -0.95
VTI1B-206ENST00000556461 ZNF579Q8NAF0 562 aaKnown RBP9.13□□□□□ -0.95
VTI1B-206ENST00000556461 SLC17A8Q8NDX2 589 aa9.13□□□□□ -0.95
VTI1B-206ENST00000556461 RDM1Q8NG50 284 aa9.13□□□□□ -0.95
VTI1B-206ENST00000556461 TNPO1Q92973 898 aaKnown RBP9.13□□□□□ -0.95
VTI1B-206ENST00000556461 TOP1MTQ969P6 601 aa9.13□□□□□ -0.95
VTI1B-206ENST00000556461 C8orf76Q96K31 380 aa9.13□□□□□ -0.95
VTI1B-206ENST00000556461 FAM167AQ96KS9 214 aa9.13□□□□□ -0.95
VTI1B-206ENST00000556461 FAM20AQ96MK3 541 aa9.13□□□□□ -0.95
VTI1B-206ENST00000556461 TBC1D32Q96NH3 1257 aa9.13□□□□□ -0.95
VTI1B-206ENST00000556461 OSMRQ99650 979 aa9.13□□□□□ -0.95
VTI1B-206ENST00000556461 TMEM60Q9H2L4 133 aa9.13□□□□□ -0.95
VTI1B-206ENST00000556461 BRMS1Q9HCU9 246 aa9.13□□□□□ -0.95
VTI1B-206ENST00000556461 ERVK-5Q9HDB9 667 aa9.13□□□□□ -0.95
VTI1B-206ENST00000556461 PRDM6Q9NQX0 595 aa9.13□□□□□ -0.95
VTI1B-206ENST00000556461 SH2B1Q9NRF2 756 aaPredicted RBP9.13□□□□□ -0.95
VTI1B-206ENST00000556461 NRBP2Q9NSY0 501 aa9.13□□□□□ -0.95
VTI1B-206ENST00000556461 SEPT9Q9UHD8 586 aaPredicted RBP9.13□□□□□ -0.95
VTI1B-206ENST00000556461 MTUS1Q9ULD2 1270 aa9.13□□□□□ -0.95
VTI1B-206ENST00000556461 PADI3Q9ULW8 664 aa9.13□□□□□ -0.95
VTI1B-206ENST00000556461 GINS2Q9Y248 185 aa9.13□□□□□ -0.95
VTI1B-206ENST00000556461 NOC2LQ9Y3T9 749 aaKnown RBP9.13□□□□□ -0.95
VTI1B-206ENST00000556461 TTC28Q96AY4 2481 aa9.12□□□□□ -0.95
VTI1B-206ENST00000556461 PRRC2BQ5JSZ5 2229 aaKnown RBP9.12□□□□□ -0.95
VTI1B-206ENST00000556461 KDM3AQ9Y4C1 1321 aa9.12□□□□□ -0.95
VTI1B-206ENST00000556461 LINC01553A4QN01 128 aa9.12□□□□□ -0.95
VTI1B-206ENST00000556461 DDX11L8A8MPP1 907 aa9.12□□□□□ -0.95
VTI1B-206ENST00000556461 ZBTB39O15060 712 aa9.12□□□□□ -0.95
VTI1B-206ENST00000556461 TBX3O15119 743 aa9.12□□□□□ -0.95
VTI1B-206ENST00000556461 LPXNO60711 386 aa9.12□□□□□ -0.95
VTI1B-206ENST00000556461 NPEPPSP55786 919 aa9.12□□□□□ -0.95
VTI1B-206ENST00000556461 TRIM29Q14134 588 aa9.12□□□□□ -0.95
VTI1B-206ENST00000556461 CCDC85BQ15834 202 aaPredicted RBP9.12□□□□□ -0.95
VTI1B-206ENST00000556461 MTERF2Q49AM1 385 aa9.12□□□□□ -0.95
VTI1B-206ENST00000556461 PLA2G4FQ68DD2 849 aa9.12□□□□□ -0.95
VTI1B-206ENST00000556461 NCAPH2Q6IBW4 605 aa9.12□□□□□ -0.95
VTI1B-206ENST00000556461 EFCAB12Q6NXP0 572 aa9.12□□□□□ -0.95
VTI1B-206ENST00000556461 ANO5Q75V66 913 aa9.12□□□□□ -0.95
VTI1B-206ENST00000556461 FAM228AQ86W67 206 aa9.12□□□□□ -0.95
VTI1B-206ENST00000556461 FBXO18Q8NFZ0 1043 aa9.12□□□□□ -0.95
VTI1B-206ENST00000556461 SP7Q8TDD2 431 aaPredicted RBP9.12□□□□□ -0.95
VTI1B-206ENST00000556461 PPM1EQ8WY54 764 aa9.12□□□□□ -0.95
VTI1B-206ENST00000556461 APBB2Q92870 758 aa9.12□□□□□ -0.95
VTI1B-206ENST00000556461 DYDC2Q96IM9 177 aa9.12□□□□□ -0.95
VTI1B-206ENST00000556461 MTMR9Q96QG7 549 aa9.12□□□□□ -0.95
VTI1B-206ENST00000556461 GAS2L1Q99501 681 aaPredicted RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms