RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 KCNMB3Q9NPA1 279 aa13.02□□□□□ -0.33
SLIRP-205ENST00000556310 DISC1Q9NRI5 854 aa13.02□□□□□ -0.33
SLIRP-205ENST00000556310 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.02□□□□□ -0.33
SLIRP-205ENST00000556310 GABBR1Q9UBS5 961 aa13.02□□□□□ -0.33
SLIRP-205ENST00000556310 SAMM50Q9Y512 469 aa13.02□□□□□ -0.33
SLIRP-205ENST00000556310 GTF3C3Q9Y5Q9 886 aa13.02□□□□□ -0.33
SLIRP-205ENST00000556310 TBX3O15119 743 aa13.01□□□□□ -0.33
SLIRP-205ENST00000556310 CHMP2AO43633 222 aa13.01□□□□□ -0.33
SLIRP-205ENST00000556310 CCNT1O60563 726 aaKnown RBP13.01□□□□□ -0.33
SLIRP-205ENST00000556310 EFCAB14O75071 495 aa13.01□□□□□ -0.33
SLIRP-205ENST00000556310 ATP2A2P16615 1042 aaKnown RBP13.01□□□□□ -0.33
SLIRP-205ENST00000556310 ATP4AP20648 1035 aa13.01□□□□□ -0.33
SLIRP-205ENST00000556310 MCM2P49736 904 aa13.01□□□□□ -0.33
SLIRP-205ENST00000556310 FOXK1P85037 733 aa13.01□□□□□ -0.33
SLIRP-205ENST00000556310 SAFBQ15424 915 aaKnown RBP eCLIP13.01□□□□□ -0.33
SLIRP-205ENST00000556310 RAB30Q15771 203 aa13.01□□□□□ -0.33
SLIRP-205ENST00000556310 ZNF484Q5JVG2 852 aa13.01□□□□□ -0.33
SLIRP-205ENST00000556310 PLPP6Q8IY26 295 aa13.01□□□□□ -0.33
SLIRP-205ENST00000556310 CKAP2LQ8IYA6 745 aa13.01□□□□□ -0.33
SLIRP-205ENST00000556310 FAM184AQ8NB25 1140 aa13.01□□□□□ -0.33
SLIRP-205ENST00000556310 TRAPPC12Q8WVT3 735 aa13.01□□□□□ -0.33
SLIRP-205ENST00000556310 GJA10Q969M2 543 aa13.01□□□□□ -0.33
SLIRP-205ENST00000556310 FAM167AQ96KS9 214 aa13.01□□□□□ -0.33
SLIRP-205ENST00000556310 FAM20AQ96MK3 541 aa13.01□□□□□ -0.33
SLIRP-205ENST00000556310 SLC9A7Q96T83 725 aa13.01□□□□□ -0.33
SLIRP-205ENST00000556310 PBX4Q9BYU1 374 aa13.01□□□□□ -0.33
SLIRP-205ENST00000556310 BACH2Q9BYV9 841 aa13.01□□□□□ -0.33
SLIRP-205ENST00000556310 PCDHA2Q9Y5H9 948 aa13.01□□□□□ -0.33
SLIRP-205ENST00000556310 CDH23Q9H251 3354 aa13.01□□□□□ -0.33
SLIRP-205ENST00000556310 SMIM35A0A1B0GVV1 85 aa13□□□□□ -0.33
SLIRP-205ENST00000556310 GRXCR1A8MXD5 290 aa13□□□□□ -0.33
SLIRP-205ENST00000556310 CD2BP2O95400 341 aaKnown RBP13□□□□□ -0.33
SLIRP-205ENST00000556310 KCNJ6P48051 423 aa13□□□□□ -0.33
SLIRP-205ENST00000556310 WDR5P61964 334 aaKnown RBP13□□□□□ -0.33
SLIRP-205ENST00000556310 MGAT3Q09327 533 aa13□□□□□ -0.33
SLIRP-205ENST00000556310 PPP2R5CQ13362 524 aa13□□□□□ -0.33
SLIRP-205ENST00000556310 PLEKHG4Q58EX7 1191 aa13□□□□□ -0.33
SLIRP-205ENST00000556310 MIER3Q7Z3K6 550 aa13□□□□□ -0.33
SLIRP-205ENST00000556310 FBXO18Q8NFZ0 1043 aa13□□□□□ -0.33
SLIRP-205ENST00000556310 PHOSPHO2Q8TCD6 241 aa13□□□□□ -0.33
SLIRP-205ENST00000556310 DNAJB3Q8WWF6 145 aa13□□□□□ -0.33
SLIRP-205ENST00000556310 TIFAQ96CG3 184 aa13□□□□□ -0.33
SLIRP-205ENST00000556310 TMX3Q96JJ7 454 aa13□□□□□ -0.33
SLIRP-205ENST00000556310 MTMR10Q9NXD2 777 aa13□□□□□ -0.33
SLIRP-205ENST00000556310 VAV3Q9UKW4 847 aa13□□□□□ -0.33
SLIRP-205ENST00000556310 ABHD14A-ACY1A0A1B0GW23 586 aa12.99□□□□□ -0.33
SLIRP-205ENST00000556310 ZBTB42B2RXF5 422 aa12.99□□□□□ -0.33
SLIRP-205ENST00000556310 ZNF862O60290 1169 aa12.99□□□□□ -0.33
SLIRP-205ENST00000556310 OATP04181 439 aa12.99□□□□□ -0.33
SLIRP-205ENST00000556310 PBX2P40425 430 aa12.99□□□□□ -0.33
SLIRP-205ENST00000556310 MRPS6P82932 125 aaKnown RBP12.99□□□□□ -0.33
SLIRP-205ENST00000556310 GUCY1B3Q02153 619 aa12.99□□□□□ -0.33
SLIRP-205ENST00000556310 PRKCEQ02156 737 aa12.99□□□□□ -0.33
SLIRP-205ENST00000556310 UGCGQ16739 394 aa12.99□□□□□ -0.33
SLIRP-205ENST00000556310 TCTN1Q2MV58 587 aa12.99□□□□□ -0.33
SLIRP-205ENST00000556310 MTHFD1LQ6UB35 978 aa12.99□□□□□ -0.33
SLIRP-205ENST00000556310 HAS1Q92839 578 aa12.99□□□□□ -0.33
SLIRP-205ENST00000556310 ZBTB10Q96DT7 871 aa12.99□□□□□ -0.33
SLIRP-205ENST00000556310 FAM49AQ9H0Q0 323 aaPredicted RBP12.99□□□□□ -0.33
SLIRP-205ENST00000556310 TTYH1Q9H313 450 aaPredicted RBP12.99□□□□□ -0.33
SLIRP-205ENST00000556310 CHD7Q9P2D1 2997 aa12.99□□□□□ -0.33
SLIRP-205ENST00000556310 MSRAQ9UJ68 235 aa12.99□□□□□ -0.33
SLIRP-205ENST00000556310 CEP131Q9UPN4 1083 aa12.99□□□□□ -0.33
SLIRP-205ENST00000556310 KIF3AQ9Y496 699 aa12.99□□□□□ -0.33
SLIRP-205ENST00000556310 PCDHA11Q9Y5I1 949 aa12.99□□□□□ -0.33
SLIRP-205ENST00000556310 ARID2Q68CP9 1835 aa12.99□□□□□ -0.33
SLIRP-205ENST00000556310 C22orf31O95567 290 aa12.98□□□□□ -0.33
SLIRP-205ENST00000556310 CHRNA1P02708 482 aa12.98□□□□□ -0.33
SLIRP-205ENST00000556310 KLRC1P26715 233 aa12.98□□□□□ -0.33
SLIRP-205ENST00000556310 IKBKEQ14164 716 aa12.98□□□□□ -0.33
SLIRP-205ENST00000556310 IER5Q5VY09 327 aa12.98□□□□□ -0.33
SLIRP-205ENST00000556310 HERC6Q8IVU3 1022 aa12.98□□□□□ -0.33
SLIRP-205ENST00000556310 SLFN12Q8IYM2 578 aa12.98□□□□□ -0.33
SLIRP-205ENST00000556310 DBF4BQ8NFT6 615 aa12.98□□□□□ -0.33
SLIRP-205ENST00000556310 SEPT8Q92599 483 aa12.98□□□□□ -0.33
SLIRP-205ENST00000556310 APBB2Q92870 758 aa12.98□□□□□ -0.33
SLIRP-205ENST00000556310 FOXP1Q9H334 677 aaPredicted RBP12.98□□□□□ -0.33
SLIRP-205ENST00000556310 SEMA6BQ9H3T3 888 aa12.98□□□□□ -0.33
SLIRP-205ENST00000556310 TRPV2Q9Y5S1 764 aa12.98□□□□□ -0.33
SLIRP-205ENST00000556310 CDY2AQ9Y6F7 541 aa12.98□□□□□ -0.33
SLIRP-205ENST00000556310 KDM3AQ9Y4C1 1321 aa12.97□□□□□ -0.33
SLIRP-205ENST00000556310 M0QZ92 97 aa12.97□□□□□ -0.33
SLIRP-205ENST00000556310 MARCH6O60337 910 aa12.97□□□□□ -0.33
SLIRP-205ENST00000556310 NEMFO60524 1076 aa12.97□□□□□ -0.33
SLIRP-205ENST00000556310 BAG4O95429 457 aaKnown RBP12.97□□□□□ -0.33
SLIRP-205ENST00000556310 GHRP10912 638 aa12.97□□□□□ -0.33
SLIRP-205ENST00000556310 RABGGTBP53611 331 aa12.97□□□□□ -0.33
SLIRP-205ENST00000556310 DEFB103AP81534 67 aa12.97□□□□□ -0.33
SLIRP-205ENST00000556310 CAMK2BQ13554 666 aa12.97□□□□□ -0.33
SLIRP-205ENST00000556310 FBXO47Q5MNV8 452 aa12.97□□□□□ -0.33
SLIRP-205ENST00000556310 TSHZ1Q6ZSZ6 1077 aa12.97□□□□□ -0.33
SLIRP-205ENST00000556310 NME8Q8N427 588 aa12.97□□□□□ -0.33
SLIRP-205ENST00000556310 FAM161BQ96MY7 647 aa12.97□□□□□ -0.33
SLIRP-205ENST00000556310 GUCD1Q96NT3 240 aa12.97□□□□□ -0.33
SLIRP-205ENST00000556310 IFIH1Q9BYX4 1025 aaKnown RBP12.97□□□□□ -0.33
SLIRP-205ENST00000556310 OSBPL7Q9BZF2 842 aa12.97□□□□□ -0.33
SLIRP-205ENST00000556310 NRBP2Q9NSY0 501 aa12.97□□□□□ -0.33
SLIRP-205ENST00000556310 YBX2Q9Y2T7 364 aaKnown RBP12.97□□□□□ -0.33
SLIRP-205ENST00000556310 SQORQ9Y6N5 450 aa12.97□□□□□ -0.33
SLIRP-205ENST00000556310 TRANK1O15050 2925 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms