RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 KRT76Q01546 638 aa15.11■□□□□ 0.01
TGFB3-204ENST00000556285 PAK2Q13177 524 aa15.11■□□□□ 0.01
TGFB3-204ENST00000556285 TRMT1LQ7Z2T5 733 aaKnown RBP15.11■□□□□ 0.01
TGFB3-204ENST00000556285 ADGRD2Q7Z7M1 963 aa15.11■□□□□ 0.01
TGFB3-204ENST00000556285 KIAA0319LQ8IZA0 1049 aa15.11■□□□□ 0.01
TGFB3-204ENST00000556285 ATP8B4Q8TF62 1192 aa15.11■□□□□ 0.01
TGFB3-204ENST00000556285 TMEM40Q8WWA1 233 aa15.11■□□□□ 0.01
TGFB3-204ENST00000556285 PPP1R16BQ96T49 567 aa15.11■□□□□ 0.01
TGFB3-204ENST00000556285 C11orf84Q9BUA3 381 aaPredicted RBP15.11■□□□□ 0.01
TGFB3-204ENST00000556285 ZMYND12Q9H0C1 365 aa15.11■□□□□ 0.01
TGFB3-204ENST00000556285 ZNF302Q9NR11 478 aa15.11■□□□□ 0.01
TGFB3-204ENST00000556285 GINS2Q9Y248 185 aa15.11■□□□□ 0.01
TGFB3-204ENST00000556285 HCN4Q9Y3Q4 1203 aa15.11■□□□□ 0.01
TGFB3-204ENST00000556285 PCDHGC5Q9Y5F6 944 aa15.11■□□□□ 0.01
TGFB3-204ENST00000556285 SQORQ9Y6N5 450 aa15.11■□□□□ 0.01
TGFB3-204ENST00000556285 TECTAO75443 2155 aa15.11■□□□□ 0.01
TGFB3-204ENST00000556285 ESYT2A0FGR8 921 aa15.1■□□□□ 0.01
TGFB3-204ENST00000556285 C19orf67A6NJJ6 358 aa15.1■□□□□ 0.01
TGFB3-204ENST00000556285 M0QZ92 97 aa15.1■□□□□ 0.01
TGFB3-204ENST00000556285 EDIL3O43854 480 aa15.1■□□□□ 0.01
TGFB3-204ENST00000556285 HBP1O60381 514 aa15.1■□□□□ 0.01
TGFB3-204ENST00000556285 HMGB1P09429 215 aaKnown RBP15.1■□□□□ 0.01
TGFB3-204ENST00000556285 IRS1P35568 1242 aa15.1■□□□□ 0.01
TGFB3-204ENST00000556285 PDXDC2PQ6P474 469 aa15.1■□□□□ 0.01
TGFB3-204ENST00000556285 NPAS4Q8IUM7 802 aa15.1■□□□□ 0.01
TGFB3-204ENST00000556285 TEX2Q8IWB9 1127 aa15.1■□□□□ 0.01
TGFB3-204ENST00000556285 GLT8D2Q9H1C3 349 aa15.1■□□□□ 0.01
TGFB3-204ENST00000556285 ERVK-5Q9HDB9 667 aa15.1■□□□□ 0.01
TGFB3-204ENST00000556285 HCSTQ9UBK5 93 aa15.1■□□□□ 0.01
TGFB3-204ENST00000556285 PLAGL2Q9UPG8 496 aa15.1■□□□□ 0.01
TGFB3-204ENST00000556285 NOC2LQ9Y3T9 749 aaKnown RBP15.1■□□□□ 0.01
TGFB3-204ENST00000556285 KDM3AQ9Y4C1 1321 aa15.1■□□□□ 0.01
TGFB3-204ENST00000556285 KMT2EQ8IZD2 1858 aa15.1■□□□□ 0.01
TGFB3-204ENST00000556285 PRR33A8MZF0 331 aa15.09■□□□□ 0.01
TGFB3-204ENST00000556285 PRPF3O43395 683 aaKnown RBP15.09■□□□□ 0.01
TGFB3-204ENST00000556285 MBTPS2O43462 519 aa15.09■□□□□ 0.01
TGFB3-204ENST00000556285 RPLP2P05387 115 aaKnown RBP15.09■□□□□ 0.01
TGFB3-204ENST00000556285 ITGB1P05556 798 aa15.09■□□□□ 0.01
TGFB3-204ENST00000556285 RPS6KB1P23443 525 aa15.09■□□□□ 0.01
TGFB3-204ENST00000556285 SLC26A2P50443 739 aa15.09■□□□□ 0.01
TGFB3-204ENST00000556285 NFX1Q12986 1120 aaKnown RBP15.09■□□□□ 0.01
TGFB3-204ENST00000556285 NTRK3Q16288 839 aa15.09■□□□□ 0.01
TGFB3-204ENST00000556285 FAM160B1Q5W0V3 765 aa15.09■□□□□ 0.01
TGFB3-204ENST00000556285 MIS18BP1Q6P0N0 1132 aa15.09■□□□□ 0.01
TGFB3-204ENST00000556285 BLOC1S2Q6QNY1 142 aa15.09■□□□□ 0.01
TGFB3-204ENST00000556285 CMTR2Q8IYT2 770 aaKnown RBP15.09■□□□□ 0.01
TGFB3-204ENST00000556285 REXO1Q8N1G1 1221 aaKnown RBP15.09■□□□□ 0.01
TGFB3-204ENST00000556285 NME8Q8N427 588 aa15.09■□□□□ 0.01
TGFB3-204ENST00000556285 TNPO1Q92973 898 aaKnown RBP15.09■□□□□ 0.01
TGFB3-204ENST00000556285 ZNF577Q9BSK1 485 aa15.09■□□□□ 0.01
TGFB3-204ENST00000556285 FTHL17Q9BXU8 183 aa15.09■□□□□ 0.01
TGFB3-204ENST00000556285 LMAN2LQ9H0V9 348 aa15.09■□□□□ 0.01
TGFB3-204ENST00000556285 IGFLR1Q9H665 355 aa15.09■□□□□ 0.01
TGFB3-204ENST00000556285 NCOA5Q9HCD5 579 aaKnown RBP15.09■□□□□ 0.01
TGFB3-204ENST00000556285 RWDD3Q9Y3V2 267 aa15.09■□□□□ 0.01
TGFB3-204ENST00000556285 NID2Q14112 1375 aa15.09■□□□□ 0.01
TGFB3-204ENST00000556285 C22orf31O95567 290 aa15.08■□□□□ 0
TGFB3-204ENST00000556285 MMP1P03956 469 aa15.08■□□□□ 0
TGFB3-204ENST00000556285 CCT2P78371 535 aaKnown RBP15.08■□□□□ 0
TGFB3-204ENST00000556285 KIZQ2M2Z5 673 aa15.08■□□□□ 0
TGFB3-204ENST00000556285 PRR16Q569H4 304 aa15.08■□□□□ 0
TGFB3-204ENST00000556285 KLHL23Q8NBE8 558 aa15.08■□□□□ 0
TGFB3-204ENST00000556285 SPPL3Q8TCT6 385 aa15.08■□□□□ 0
TGFB3-204ENST00000556285 LENG9Q96B70 501 aa15.08■□□□□ 0
TGFB3-204ENST00000556285 AGXT2Q9BYV1 514 aa15.08■□□□□ 0
TGFB3-204ENST00000556285 C6orf50Q9HD87 102 aa15.08■□□□□ 0
TGFB3-204ENST00000556285 ARIH1Q9Y4X5 557 aaPredicted RBP15.08■□□□□ 0
TGFB3-204ENST00000556285 COL1A2P08123 1366 aa15.08■□□□□ 0
TGFB3-204ENST00000556285 CCDC196A0A1B0GTZ2 297 aa15.07■□□□□ 0
TGFB3-204ENST00000556285 RPS6KA5O75582 802 aa15.07■□□□□ 0
TGFB3-204ENST00000556285 VTNP04004 478 aa15.07■□□□□ 0
TGFB3-204ENST00000556285 SARSP49591 514 aaKnown RBP15.07■□□□□ 0
TGFB3-204ENST00000556285 RBM10P98175 930 aaKnown RBP15.07■□□□□ 0
TGFB3-204ENST00000556285 ZNF484Q5JVG2 852 aa15.07■□□□□ 0
TGFB3-204ENST00000556285 FAM102BQ5T8I3 360 aa15.07■□□□□ 0
TGFB3-204ENST00000556285 CKAP2LQ8IYA6 745 aa15.07■□□□□ 0
TGFB3-204ENST00000556285 GJA10Q969M2 543 aa15.07■□□□□ 0
TGFB3-204ENST00000556285 OSMRQ99650 979 aa15.07■□□□□ 0
TGFB3-204ENST00000556285 ADAM2Q99965 735 aa15.07■□□□□ 0
TGFB3-204ENST00000556285 PLVAPQ9BX97 442 aa15.07■□□□□ 0
TGFB3-204ENST00000556285 SLC26A6Q9BXS9 759 aa15.07■□□□□ 0
TGFB3-204ENST00000556285 VPS54Q9P1Q0 977 aa15.07■□□□□ 0
TGFB3-204ENST00000556285 GABBR1Q9UBS5 961 aa15.07■□□□□ 0
TGFB3-204ENST00000556285 ST3GAL5Q9UNP4 418 aa15.07■□□□□ 0
TGFB3-204ENST00000556285 MAFBQ9Y5Q3 323 aaPredicted RBP15.07■□□□□ 0
TGFB3-204ENST00000556285 DCXO43602 365 aa15.06■□□□□ 0
TGFB3-204ENST00000556285 GPR32O75388 356 aa15.06■□□□□ 0
TGFB3-204ENST00000556285 GLP2RO95838 553 aa15.06■□□□□ 0
TGFB3-204ENST00000556285 STAG3L1P0CL83 205 aa15.06■□□□□ 0
TGFB3-204ENST00000556285 PDIA3P30101 505 aaKnown RBP15.06■□□□□ 0
TGFB3-204ENST00000556285 CIITAP33076 1130 aa15.06■□□□□ 0
TGFB3-204ENST00000556285 SMAD2Q15796 467 aaKnown RBP15.06■□□□□ 0
TGFB3-204ENST00000556285 PUS10Q3MIT2 529 aaKnown RBP15.06■□□□□ 0
TGFB3-204ENST00000556285 ZNF746Q6NUN9 644 aaPredicted RBP15.06■□□□□ 0
TGFB3-204ENST00000556285 ALYREFQ86V81 257 aaKnown RBP15.06■□□□□ 0
TGFB3-204ENST00000556285 ADHFE1Q8IWW8 467 aa15.06■□□□□ 0
TGFB3-204ENST00000556285 FBXL16Q8N461 479 aa15.06■□□□□ 0
TGFB3-204ENST00000556285 BBXQ8WY36 941 aaPredicted RBP15.06■□□□□ 0
TGFB3-204ENST00000556285 P2RX5Q93086 422 aa15.06■□□□□ 0
TGFB3-204ENST00000556285 ZNF668Q96K58 619 aaPredicted RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms