RNA–Protein interactions for RNA: ENST00000556175.1

SDR39U1-216, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 775 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-216ENST00000556175 FAM167AQ96KS9 214 aa24.45■■□□□ 1.5
SDR39U1-216ENST00000556175 C1QTNF1Q9BXJ1 281 aa24.45■■□□□ 1.5
SDR39U1-216ENST00000556175 NCOA5Q9HCD5 579 aaKnown RBP24.45■■□□□ 1.5
SDR39U1-216ENST00000556175 SAMM50Q9Y512 469 aa24.45■■□□□ 1.5
SDR39U1-216ENST00000556175 WDR64B1ANS9 1081 aa24.44■■□□□ 1.5
SDR39U1-216ENST00000556175 CPLX1O14810 134 aa24.44■■□□□ 1.5
SDR39U1-216ENST00000556175 ADAMTS3O15072 1205 aa24.44■■□□□ 1.5
SDR39U1-216ENST00000556175 NCK2O43639 380 aa24.44■■□□□ 1.5
SDR39U1-216ENST00000556175 RPS6KA5O75582 802 aa24.44■■□□□ 1.5
SDR39U1-216ENST00000556175 LINC00271P0C7V0 271 aa24.44■■□□□ 1.5
SDR39U1-216ENST00000556175 USP11P51784 963 aa24.44■■□□□ 1.5
SDR39U1-216ENST00000556175 NLRP5P59047 1200 aa24.44■■□□□ 1.5
SDR39U1-216ENST00000556175 CPLX2Q6PUV4 134 aaKnown RBP24.44■■□□□ 1.5
SDR39U1-216ENST00000556175 KIAA0319LQ8IZA0 1049 aa24.44■■□□□ 1.5
SDR39U1-216ENST00000556175 UIMC1Q96RL1 719 aa24.44■■□□□ 1.5
SDR39U1-216ENST00000556175 TM6SF1Q9BZW5 370 aa24.44■■□□□ 1.5
SDR39U1-216ENST00000556175 GINS2Q9Y248 185 aa24.44■■□□□ 1.5
SDR39U1-216ENST00000556175 LOXHD1Q8IVV2 1947 aa24.43■■□□□ 1.5
SDR39U1-216ENST00000556175 ZBTB42B2RXF5 422 aa24.43■■□□□ 1.5
SDR39U1-216ENST00000556175 PPFIA3O75145 1194 aa24.43■■□□□ 1.5
SDR39U1-216ENST00000556175 NEFLP07196 543 aa24.43■■□□□ 1.5
SDR39U1-216ENST00000556175 ATP4AP20648 1035 aa24.43■■□□□ 1.5
SDR39U1-216ENST00000556175 SSRP1Q08945 709 aaKnown RBP24.43■■□□□ 1.5
SDR39U1-216ENST00000556175 NFX1Q12986 1120 aaKnown RBP24.43■■□□□ 1.5
SDR39U1-216ENST00000556175 TOB2Q14106 344 aaPredicted RBP24.43■■□□□ 1.5
SDR39U1-216ENST00000556175 TCEAL5Q5H9L2 206 aa24.43■■□□□ 1.5
SDR39U1-216ENST00000556175 RTN4RL1Q86UN2 441 aaPredicted RBP24.43■■□□□ 1.5
SDR39U1-216ENST00000556175 FAM177A1Q8N128 213 aaPredicted RBP24.43■■□□□ 1.5
SDR39U1-216ENST00000556175 CRIPAKQ8N1N5 446 aa24.43■■□□□ 1.5
SDR39U1-216ENST00000556175 LENG9Q96B70 501 aa24.43■■□□□ 1.5
SDR39U1-216ENST00000556175 PABPC5Q96DU9 382 aaKnown RBP24.43■■□□□ 1.5
SDR39U1-216ENST00000556175 ZNF274Q96GC6 653 aaPredicted RBP24.43■■□□□ 1.5
SDR39U1-216ENST00000556175 GABBR1Q9UBS5 961 aa24.43■■□□□ 1.5
SDR39U1-216ENST00000556175 LRFN2Q9ULH4 789 aa24.43■■□□□ 1.5
SDR39U1-216ENST00000556175 MYH9P35579 1960 aaKnown RBP24.43■■□□□ 1.5
SDR39U1-216ENST00000556175 GPR182O15218 404 aa24.42■■□□□ 1.5
SDR39U1-216ENST00000556175 MAGEB2O15479 319 aa24.42■■□□□ 1.5
SDR39U1-216ENST00000556175 DEXIO95424 95 aa24.42■■□□□ 1.5
SDR39U1-216ENST00000556175 C22orf31O95567 290 aa24.42■■□□□ 1.5
SDR39U1-216ENST00000556175 NAALADL2Q58DX5 795 aa24.42■■□□□ 1.5
SDR39U1-216ENST00000556175 P2RX5Q93086 422 aa24.42■■□□□ 1.5
SDR39U1-216ENST00000556175 RIT2Q99578 217 aa24.42■■□□□ 1.5
SDR39U1-216ENST00000556175 C1orf112Q9NSG2 853 aa24.42■■□□□ 1.5
SDR39U1-216ENST00000556175 SFNP31947 248 aa24.41■■□□□ 1.5
SDR39U1-216ENST00000556175 SARSP49591 514 aaKnown RBP24.41■■□□□ 1.5
SDR39U1-216ENST00000556175 COL19A1Q14993 1142 aa24.41■■□□□ 1.5
SDR39U1-216ENST00000556175 TMEM266Q2M3C6 531 aa24.41■■□□□ 1.5
SDR39U1-216ENST00000556175 ZNF710Q8N1W2 664 aa24.41■■□□□ 1.5
SDR39U1-216ENST00000556175 METTL13Q8N6R0 699 aa24.41■■□□□ 1.5
SDR39U1-216ENST00000556175 NEK9Q8TD19 979 aa24.41■■□□□ 1.5
SDR39U1-216ENST00000556175 TMX1Q9H3N1 280 aa24.41■■□□□ 1.5
SDR39U1-216ENST00000556175 ERVK-5Q9HDB9 667 aa24.41■■□□□ 1.5
SDR39U1-216ENST00000556175 PCDHA4Q9UN74 947 aa24.41■■□□□ 1.5
SDR39U1-216ENST00000556175 FAM50BQ9Y247 325 aa24.41■■□□□ 1.5
SDR39U1-216ENST00000556175 NOC2LQ9Y3T9 749 aaKnown RBP24.41■■□□□ 1.5
SDR39U1-216ENST00000556175 MRPL42Q9Y6G3 142 aaKnown RBP24.41■■□□□ 1.5
SDR39U1-216ENST00000556175 DENND3A2RUS2 1198 aa24.4■■□□□ 1.5
SDR39U1-216ENST00000556175 GRM6O15303 877 aa24.4■■□□□ 1.5
SDR39U1-216ENST00000556175 MSH4O15457 936 aa24.4■■□□□ 1.5
SDR39U1-216ENST00000556175 GAS7O60861 476 aa24.4■■□□□ 1.5
SDR39U1-216ENST00000556175 MMP1P03956 469 aa24.4■■□□□ 1.5
SDR39U1-216ENST00000556175 JAK3P52333 1124 aa24.4■■□□□ 1.5
SDR39U1-216ENST00000556175 CRYBB1P53674 252 aaPredicted RBP24.4■■□□□ 1.5
SDR39U1-216ENST00000556175 PTCRAQ6ISU1 281 aaPredicted RBP24.4■■□□□ 1.5
SDR39U1-216ENST00000556175 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.4■■□□□ 1.5
SDR39U1-216ENST00000556175 MAP7D2Q96T17 732 aa24.4■■□□□ 1.5
SDR39U1-216ENST00000556175 TEKT3Q9BXF9 490 aa24.4■■□□□ 1.5
SDR39U1-216ENST00000556175 DISC1Q9NRI5 854 aa24.4■■□□□ 1.5
SDR39U1-216ENST00000556175 PCDHB7Q9Y5E2 793 aa24.4■■□□□ 1.5
SDR39U1-216ENST00000556175 TMOD1P28289 359 aa24.39■■□□□ 1.49
SDR39U1-216ENST00000556175 KIZQ2M2Z5 673 aa24.39■■□□□ 1.49
SDR39U1-216ENST00000556175 LRCH2Q5VUJ6 765 aa24.39■■□□□ 1.49
SDR39U1-216ENST00000556175 GALNT17Q6IS24 598 aa24.39■■□□□ 1.49
SDR39U1-216ENST00000556175 TBCKQ8TEA7 893 aa24.39■■□□□ 1.49
SDR39U1-216ENST00000556175 SLC5A5Q92911 643 aa24.39■■□□□ 1.49
SDR39U1-216ENST00000556175 PPP2R3CQ969Q6 453 aa24.39■■□□□ 1.49
SDR39U1-216ENST00000556175 RGS18Q9NS28 235 aa24.39■■□□□ 1.49
SDR39U1-216ENST00000556175 NRBP2Q9NSY0 501 aa24.39■■□□□ 1.49
SDR39U1-216ENST00000556175 ST3GAL5Q9UNP4 418 aa24.39■■□□□ 1.49
SDR39U1-216ENST00000556175 OATP04181 439 aa24.38■■□□□ 1.49
SDR39U1-216ENST00000556175 COL9A1P20849 921 aa24.38■■□□□ 1.49
SDR39U1-216ENST00000556175 Q4G0T1 1027 aa24.38■■□□□ 1.49
SDR39U1-216ENST00000556175 EP400NLQ6ZTU2 488 aa24.38■■□□□ 1.49
SDR39U1-216ENST00000556175 SLC24A5Q71RS6 500 aa24.38■■□□□ 1.49
SDR39U1-216ENST00000556175 TRMT1LQ7Z2T5 733 aaKnown RBP24.38■■□□□ 1.49
SDR39U1-216ENST00000556175 DAGLBQ8NCG7 672 aa24.38■■□□□ 1.49
SDR39U1-216ENST00000556175 RDM1Q8NG50 284 aa24.38■■□□□ 1.49
SDR39U1-216ENST00000556175 TMEM40Q8WWA1 233 aa24.38■■□□□ 1.49
SDR39U1-216ENST00000556175 OSMRQ99650 979 aa24.38■■□□□ 1.49
SDR39U1-216ENST00000556175 UPF3BQ9BZI7 483 aaKnown RBP24.38■■□□□ 1.49
SDR39U1-216ENST00000556175 CDHR5Q9HBB8 845 aa24.38■■□□□ 1.49
SDR39U1-216ENST00000556175 CLDND1Q9NY35 253 aa24.38■■□□□ 1.49
SDR39U1-216ENST00000556175 PLAGL2Q9UPG8 496 aa24.38■■□□□ 1.49
SDR39U1-216ENST00000556175 EVPLQ92817 2033 aa24.38■■□□□ 1.49
SDR39U1-216ENST00000556175 GRXCR2A6NFK2 248 aa24.37■■□□□ 1.49
SDR39U1-216ENST00000556175 H3BQ06 376 aaPredicted RBP24.37■■□□□ 1.49
SDR39U1-216ENST00000556175 CDKL5O76039 1030 aa24.37■■□□□ 1.49
SDR39U1-216ENST00000556175 PAN2Q504Q3 1202 aaKnown RBP24.37■■□□□ 1.49
SDR39U1-216ENST00000556175 BLIDQ8IZY5 108 aa24.37■■□□□ 1.49
SDR39U1-216ENST00000556175 ADAM2Q99965 735 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms