RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 SKIP12755 728 aa11.5□□□□□ -0.57
ACTN1-216ENST00000556083 PMLP29590 882 aa11.5□□□□□ -0.57
ACTN1-216ENST00000556083 E2F5Q15329 346 aa11.5□□□□□ -0.57
ACTN1-216ENST00000556083 NAALADL2Q58DX5 795 aa11.5□□□□□ -0.57
ACTN1-216ENST00000556083 RESP18Q5W5W9 173 aa11.5□□□□□ -0.57
ACTN1-216ENST00000556083 SYDE1Q6ZW31 735 aaPredicted RBP11.5□□□□□ -0.57
ACTN1-216ENST00000556083 SESTD1Q86VW0 696 aa11.5□□□□□ -0.57
ACTN1-216ENST00000556083 SLC35F6Q8N357 371 aa11.5□□□□□ -0.57
ACTN1-216ENST00000556083 LCORLQ8N3X6 602 aa11.5□□□□□ -0.57
ACTN1-216ENST00000556083 GUF1Q8N442 669 aaKnown RBP11.5□□□□□ -0.57
ACTN1-216ENST00000556083 CLIC6Q96NY7 704 aa11.5□□□□□ -0.57
ACTN1-216ENST00000556083 PALD1Q9ULE6 856 aa11.5□□□□□ -0.57
ACTN1-216ENST00000556083 NFU1Q9UMS0 254 aa11.5□□□□□ -0.57
ACTN1-216ENST00000556083 FAM187AA6NFU0 413 aa11.5□□□□□ -0.57
ACTN1-216ENST00000556083 TBX3O15119 743 aa11.5□□□□□ -0.57
ACTN1-216ENST00000556083 PLCG1P19174 1290 aa11.5□□□□□ -0.57
ACTN1-216ENST00000556083 MX2P20592 715 aa11.5□□□□□ -0.57
ACTN1-216ENST00000556083 SMARCA1P28370 1054 aa11.5□□□□□ -0.57
ACTN1-216ENST00000556083 TCP11X2Q5H9J9 407 aa11.5□□□□□ -0.57
ACTN1-216ENST00000556083 RNF219Q5W0B1 726 aaPredicted RBP11.5□□□□□ -0.57
ACTN1-216ENST00000556083 SKA2Q8WVK7 121 aaPredicted RBP11.5□□□□□ -0.57
ACTN1-216ENST00000556083 LPAR1Q92633 364 aa11.5□□□□□ -0.57
ACTN1-216ENST00000556083 PAGE5Q96GU1 130 aa11.5□□□□□ -0.57
ACTN1-216ENST00000556083 TMEM51Q9NW97 253 aa11.5□□□□□ -0.57
ACTN1-216ENST00000556083 WDR35Q9P2L0 1181 aa11.5□□□□□ -0.57
ACTN1-216ENST00000556083 TRIM33Q9UPN9 1127 aa11.5□□□□□ -0.57
ACTN1-216ENST00000556083 LRRD1A4D1F6 860 aa11.5□□□□□ -0.57
ACTN1-216ENST00000556083 ZRANB2O95218 330 aaKnown RBP eCLIP11.5□□□□□ -0.57
ACTN1-216ENST00000556083 ARHGDIAP52565 204 aa11.5□□□□□ -0.57
ACTN1-216ENST00000556083 DR1Q01658 176 aa11.5□□□□□ -0.57
ACTN1-216ENST00000556083 GRM4Q14833 912 aa11.5□□□□□ -0.57
ACTN1-216ENST00000556083 TSGA10IPQ3SY00 556 aa11.5□□□□□ -0.57
ACTN1-216ENST00000556083 KIAA1755Q5JYT7 1200 aa11.5□□□□□ -0.57
ACTN1-216ENST00000556083 MB21D1Q8N884 522 aa11.5□□□□□ -0.57
ACTN1-216ENST00000556083 MTBPQ96DY7 904 aa11.5□□□□□ -0.57
ACTN1-216ENST00000556083 GDAP1L1Q96MZ0 367 aa11.5□□□□□ -0.57
ACTN1-216ENST00000556083 ZHX2Q9Y6X8 837 aa11.5□□□□□ -0.57
ACTN1-216ENST00000556083 A0A1W2PQC6 194 aa11.49□□□□□ -0.57
ACTN1-216ENST00000556083 USP17L10C9JJH3 530 aa11.49□□□□□ -0.57
ACTN1-216ENST00000556083 NOP14P78316 857 aaKnown RBP11.49□□□□□ -0.57
ACTN1-216ENST00000556083 GPC5P78333 572 aa11.49□□□□□ -0.57
ACTN1-216ENST00000556083 MTMR1Q13613 665 aa11.49□□□□□ -0.57
ACTN1-216ENST00000556083 PDIA5Q14554 519 aa11.49□□□□□ -0.57
ACTN1-216ENST00000556083 NBPF9Q3BBW0 867 aa11.49□□□□□ -0.57
ACTN1-216ENST00000556083 MTERF2Q49AM1 385 aa11.49□□□□□ -0.57
ACTN1-216ENST00000556083 SP8Q8IXZ3 490 aa11.49□□□□□ -0.57
ACTN1-216ENST00000556083 PUS3Q9BZE2 481 aaKnown RBP11.49□□□□□ -0.57
ACTN1-216ENST00000556083 NHEJ1Q9H9Q4 299 aaPredicted RBP11.49□□□□□ -0.57
ACTN1-216ENST00000556083 EXOC1LA0A1B0GW35 172 aa11.49□□□□□ -0.57
ACTN1-216ENST00000556083 LGALS16A8MUM7 142 aa11.49□□□□□ -0.57
ACTN1-216ENST00000556083 HNRNPCL1O60812 293 aaKnown RBP11.49□□□□□ -0.57
ACTN1-216ENST00000556083 PSMC5P62195 406 aa11.49□□□□□ -0.57
ACTN1-216ENST00000556083 ILF2Q12905 390 aaKnown RBP11.49□□□□□ -0.57
ACTN1-216ENST00000556083 TRADDQ15628 312 aa11.49□□□□□ -0.57
ACTN1-216ENST00000556083 MFSD14CQ5VZR4 134 aa11.49□□□□□ -0.57
ACTN1-216ENST00000556083 RNF168Q8IYW5 571 aaPredicted RBP11.49□□□□□ -0.57
ACTN1-216ENST00000556083 PYROXD1Q8WU10 500 aa11.49□□□□□ -0.57
ACTN1-216ENST00000556083 OSBP2Q969R2 916 aa11.49□□□□□ -0.57
ACTN1-216ENST00000556083 PLA2G12BQ9BX93 195 aa11.49□□□□□ -0.57
ACTN1-216ENST00000556083 PCDHA13Q9Y5I0 950 aa11.49□□□□□ -0.57
ACTN1-216ENST00000556083 PRDM15P57071 1507 aaPredicted RBP11.49□□□□□ -0.57
ACTN1-216ENST00000556083 PREX2Q70Z35 1606 aa11.49□□□□□ -0.57
ACTN1-216ENST00000556083 PPP1R12AO14974 1030 aaPredicted RBP11.49□□□□□ -0.57
ACTN1-216ENST00000556083 MAPK13O15264 365 aa11.49□□□□□ -0.57
ACTN1-216ENST00000556083 MAFGO15525 162 aa11.49□□□□□ -0.57
ACTN1-216ENST00000556083 TRAPPC3O43617 180 aa11.49□□□□□ -0.57
ACTN1-216ENST00000556083 RASGRF1Q13972 1273 aa11.49□□□□□ -0.57
ACTN1-216ENST00000556083 SGMS1Q86VZ5 419 aa11.49□□□□□ -0.57
ACTN1-216ENST00000556083 SPDYE1Q8NFV5 336 aaPredicted RBP11.49□□□□□ -0.57
ACTN1-216ENST00000556083 MGARPQ8TDB4 240 aa11.49□□□□□ -0.57
ACTN1-216ENST00000556083 PGBD1Q96JS3 809 aa11.49□□□□□ -0.57
ACTN1-216ENST00000556083 HEXIM2Q96MH2 286 aaKnown RBP11.49□□□□□ -0.57
ACTN1-216ENST00000556083 TUFT1Q9NNX1 390 aa11.49□□□□□ -0.57
ACTN1-216ENST00000556083 PCDHB8Q9UN66 801 aa11.49□□□□□ -0.57
ACTN1-216ENST00000556083 NDUFB9Q9Y6M9 179 aa11.49□□□□□ -0.57
ACTN1-216ENST00000556083 CAPN7Q9Y6W3 813 aa11.49□□□□□ -0.57
ACTN1-216ENST00000556083 MAP3K4Q9Y6R4 1608 aa11.49□□□□□ -0.57
ACTN1-216ENST00000556083 ROBO2Q9HCK4 1378 aa11.49□□□□□ -0.57
ACTN1-216ENST00000556083 PLA2R1Q13018 1463 aa11.49□□□□□ -0.57
ACTN1-216ENST00000556083 SASH1O94885 1247 aa11.48□□□□□ -0.57
ACTN1-216ENST00000556083 MAP2K2P36507 400 aa11.48□□□□□ -0.57
ACTN1-216ENST00000556083 QARSP47897 775 aaKnown RBP11.48□□□□□ -0.57
ACTN1-216ENST00000556083 CDR2Q01850 454 aa11.48□□□□□ -0.57
ACTN1-216ENST00000556083 DIXDC1Q155Q3 683 aa11.48□□□□□ -0.57
ACTN1-216ENST00000556083 SLC10A5Q5PT55 438 aa11.48□□□□□ -0.57
ACTN1-216ENST00000556083 KAZNQ674X7 775 aa11.48□□□□□ -0.57
ACTN1-216ENST00000556083 C4orf22Q6V702 233 aa11.48□□□□□ -0.57
ACTN1-216ENST00000556083 KCTD1Q719H9 257 aa11.48□□□□□ -0.57
ACTN1-216ENST00000556083 CDKL3Q8IVW4 592 aaPredicted RBP11.48□□□□□ -0.57
ACTN1-216ENST00000556083 PDZD8Q8NEN9 1154 aa11.48□□□□□ -0.57
ACTN1-216ENST00000556083 DESI2Q9BSY9 194 aa11.48□□□□□ -0.57
ACTN1-216ENST00000556083 MRPL4Q9BYD3 311 aaKnown RBP11.48□□□□□ -0.57
ACTN1-216ENST00000556083 MROH7-TTC4A0A0A0MT08 1334 aa11.48□□□□□ -0.57
ACTN1-216ENST00000556083 A0A087WUV0 522 aaPredicted RBP11.48□□□□□ -0.57
ACTN1-216ENST00000556083 C19orf81C9J6K1 198 aa11.48□□□□□ -0.57
ACTN1-216ENST00000556083 GNGT2O14610 69 aa11.48□□□□□ -0.57
ACTN1-216ENST00000556083 GSTA4O15217 222 aa11.48□□□□□ -0.57
ACTN1-216ENST00000556083 SERPINB6P35237 376 aa11.48□□□□□ -0.57
ACTN1-216ENST00000556083 CRKP46108 304 aa11.48□□□□□ -0.57
ACTN1-216ENST00000556083 RBL2Q08999 1139 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms