RNA–Protein interactions for RNA: ENST00000556067.1

ATL1-208, Transcript of atlastin GTPase 1, human

TSL 4

Gene ATL1, Length 550 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATL1-208	ENST00000556067	FBXO28	Q9NVF7	368 aa		6.26	□□□□□ -1.41
ATL1-208	ENST00000556067	DDX25	Q9UHL0	483 aa	Known RBP	6.26	□□□□□ -1.41
ATL1-208	ENST00000556067	LRFN2	Q9ULH4	789 aa		6.26	□□□□□ -1.41
ATL1-208	ENST00000556067	SCN4A	P35499	1836 aa		6.25	□□□□□ -1.41
ATL1-208	ENST00000556067	MYH6	P13533	1939 aa		6.25	□□□□□ -1.41
ATL1-208	ENST00000556067		A0A0G2JLL6	359 aa	Predicted RBP	6.25	□□□□□ -1.41
ATL1-208	ENST00000556067		B4DLN1	442 aa		6.25	□□□□□ -1.41
ATL1-208	ENST00000556067	VWA5A	O00534	786 aa		6.25	□□□□□ -1.41
ATL1-208	ENST00000556067	MEIS2	O14770	477 aa		6.25	□□□□□ -1.41
ATL1-208	ENST00000556067	POLR2D	O15514	142 aa	Known RBP	6.25	□□□□□ -1.41
ATL1-208	ENST00000556067	CELF2	O95319	508 aa	Known RBP	6.25	□□□□□ -1.41
ATL1-208	ENST00000556067	CETP	P11597	493 aa		6.25	□□□□□ -1.41
ATL1-208	ENST00000556067	HOXA13	P31271	388 aa	Predicted RBP	6.25	□□□□□ -1.41
ATL1-208	ENST00000556067	COPB2	P35606	906 aa		6.25	□□□□□ -1.41
ATL1-208	ENST00000556067	STAT6	P42226	847 aa		6.25	□□□□□ -1.41
ATL1-208	ENST00000556067	TXK	P42681	527 aa		6.25	□□□□□ -1.41
ATL1-208	ENST00000556067	GTF2A2	P52657	109 aa		6.25	□□□□□ -1.41
ATL1-208	ENST00000556067	ARHGAP4	P98171	946 aa		6.25	□□□□□ -1.41
ATL1-208	ENST00000556067	PDIA5	Q14554	519 aa		6.25	□□□□□ -1.41
ATL1-208	ENST00000556067	NOM1	Q5C9Z4	860 aa	Known RBP	6.25	□□□□□ -1.41
ATL1-208	ENST00000556067	COX20	Q5RI15	118 aa		6.25	□□□□□ -1.41
ATL1-208	ENST00000556067	ZNF468	Q5VIY5	522 aa	Predicted RBP	6.25	□□□□□ -1.41
ATL1-208	ENST00000556067	KRT79	Q5XKE5	535 aa		6.25	□□□□□ -1.41
ATL1-208	ENST00000556067	SNRNP48	Q6IEG0	339 aa	Known RBP	6.25	□□□□□ -1.41
ATL1-208	ENST00000556067	SHC4	Q6S5L8	630 aa		6.25	□□□□□ -1.41
ATL1-208	ENST00000556067	MOXD1	Q6UVY6	613 aa		6.25	□□□□□ -1.41
ATL1-208	ENST00000556067	DLK2	Q6UY11	383 aa		6.25	□□□□□ -1.41
ATL1-208	ENST00000556067	SLCO4C1	Q6ZQN7	724 aa		6.25	□□□□□ -1.41
ATL1-208	ENST00000556067	RNF207	Q6ZRF8	634 aa		6.25	□□□□□ -1.41
ATL1-208	ENST00000556067	PRRT2	Q7Z6L0	340 aa	Predicted RBP	6.25	□□□□□ -1.41
ATL1-208	ENST00000556067	CKAP2L	Q8IYA6	745 aa		6.25	□□□□□ -1.41
ATL1-208	ENST00000556067	ENGASE	Q8NFI3	743 aa		6.25	□□□□□ -1.41
ATL1-208	ENST00000556067	ERMN	Q8TAM6	284 aa		6.25	□□□□□ -1.41
ATL1-208	ENST00000556067	GTF3C2	Q8WUA4	911 aa	Predicted RBP	6.25	□□□□□ -1.41
ATL1-208	ENST00000556067	BHMT	Q93088	406 aa		6.25	□□□□□ -1.41
ATL1-208	ENST00000556067	CCDC47	Q96A33	483 aa	Known RBP	6.25	□□□□□ -1.41
ATL1-208	ENST00000556067	ATG4C	Q96DT6	458 aa		6.25	□□□□□ -1.41
ATL1-208	ENST00000556067	IFT43	Q96FT9	208 aa		6.25	□□□□□ -1.41
ATL1-208	ENST00000556067	MPHOSPH6	Q99547	160 aa	Known RBP	6.25	□□□□□ -1.41
ATL1-208	ENST00000556067	TEX13B	Q9BXU2	312 aa		6.25	□□□□□ -1.41
ATL1-208	ENST00000556067	PANK2	Q9BZ23	570 aa		6.25	□□□□□ -1.41
ATL1-208	ENST00000556067	LRRC27	Q9C0I9	530 aa		6.25	□□□□□ -1.41
ATL1-208	ENST00000556067	SAP130	Q9H0E3	1048 aa		6.25	□□□□□ -1.41
ATL1-208	ENST00000556067	GOLPH3L	Q9H4A5	285 aa		6.25	□□□□□ -1.41
ATL1-208	ENST00000556067	IGFLR1	Q9H665	355 aa		6.25	□□□□□ -1.41
ATL1-208	ENST00000556067	HOMER2	Q9NSB8	354 aa		6.25	□□□□□ -1.41
ATL1-208	ENST00000556067	RNF146	Q9NTX7	359 aa		6.25	□□□□□ -1.41
ATL1-208	ENST00000556067	LRWD1	Q9UFC0	647 aa		6.25	□□□□□ -1.41
ATL1-208	ENST00000556067	FBXO40	Q9UH90	709 aa		6.25	□□□□□ -1.41
ATL1-208	ENST00000556067	TCEAL9	Q9UHQ7	104 aa		6.25	□□□□□ -1.41
ATL1-208	ENST00000556067	DOCK1	Q14185	1865 aa		6.24	□□□□□ -1.41
ATL1-208	ENST00000556067	SSC5D	A1L4H1	1573 aa		6.24	□□□□□ -1.41
ATL1-208	ENST00000556067	CYP3A7-CYP3A51P	A0A087WV96	503 aa		6.24	□□□□□ -1.41
ATL1-208	ENST00000556067	FAM237A	A0A1B0GTK4	181 aa		6.24	□□□□□ -1.41
ATL1-208	ENST00000556067	TRAF5	O00463	557 aa		6.24	□□□□□ -1.41
ATL1-208	ENST00000556067	TBX3	O15119	743 aa		6.24	□□□□□ -1.41
ATL1-208	ENST00000556067	SLC26A4	O43511	780 aa		6.24	□□□□□ -1.41
ATL1-208	ENST00000556067	MICAL2	O94851	1124 aa		6.24	□□□□□ -1.41
ATL1-208	ENST00000556067	CYP3A4	P08684	503 aa		6.24	□□□□□ -1.41
ATL1-208	ENST00000556067	CYP3A7	P24462	503 aa		6.24	□□□□□ -1.41
ATL1-208	ENST00000556067	HOXA7	P31268	230 aa	Predicted RBP	6.24	□□□□□ -1.41
ATL1-208	ENST00000556067	IRS1	P35568	1242 aa		6.24	□□□□□ -1.41
ATL1-208	ENST00000556067	SREBF1	P36956	1147 aa		6.24	□□□□□ -1.41
ATL1-208	ENST00000556067	STAT3	P40763	770 aa		6.24	□□□□□ -1.41
ATL1-208	ENST00000556067	TEC	P42680	631 aa		6.24	□□□□□ -1.41
ATL1-208	ENST00000556067	TPM4	P67936	248 aa		6.24	□□□□□ -1.41
ATL1-208	ENST00000556067	AMPD3	Q01432	767 aa		6.24	□□□□□ -1.41
ATL1-208	ENST00000556067	SNW1	Q13573	536 aa	Known RBP	6.24	□□□□□ -1.41
ATL1-208	ENST00000556067	STX1A	Q16623	288 aa		6.24	□□□□□ -1.41
ATL1-208	ENST00000556067	PRR16	Q569H4	304 aa		6.24	□□□□□ -1.41
ATL1-208	ENST00000556067	SPECC1	Q5M775	1068 aa		6.24	□□□□□ -1.41
ATL1-208	ENST00000556067	LDLRAD1	Q5T700	205 aa		6.24	□□□□□ -1.41
ATL1-208	ENST00000556067	ARHGEF16	Q5VV41	709 aa		6.24	□□□□□ -1.41
ATL1-208	ENST00000556067	RRAGB	Q5VZM2	374 aa		6.24	□□□□□ -1.41
ATL1-208	ENST00000556067	XRRA1	Q6P2D8	792 aa		6.24	□□□□□ -1.41
ATL1-208	ENST00000556067	C16orf46	Q6P387	395 aa		6.24	□□□□□ -1.41
ATL1-208	ENST00000556067	NSMF	Q6X4W1	530 aa		6.24	□□□□□ -1.41
ATL1-208	ENST00000556067	KRBA2	Q6ZNG9	492 aa		6.24	□□□□□ -1.41
ATL1-208	ENST00000556067	MOB2	Q70IA6	237 aa		6.24	□□□□□ -1.41
ATL1-208	ENST00000556067	CABP7	Q86V35	215 aa		6.24	□□□□□ -1.41
ATL1-208	ENST00000556067	ELOA2	Q8IYF1	753 aa	Predicted RBP	6.24	□□□□□ -1.41
ATL1-208	ENST00000556067	PDILT	Q8N807	584 aa		6.24	□□□□□ -1.41
ATL1-208	ENST00000556067	CHST13	Q8NET6	341 aa		6.24	□□□□□ -1.41
ATL1-208	ENST00000556067	DHX58	Q96C10	678 aa		6.24	□□□□□ -1.41
ATL1-208	ENST00000556067	MYO19	Q96H55	970 aa		6.24	□□□□□ -1.41
ATL1-208	ENST00000556067	CLMN	Q96JQ2	1002 aa		6.24	□□□□□ -1.41
ATL1-208	ENST00000556067	FAM20A	Q96MK3	541 aa		6.24	□□□□□ -1.41
ATL1-208	ENST00000556067	PNMA5	Q96PV4	448 aa		6.24	□□□□□ -1.41
ATL1-208	ENST00000556067	CUEDC2	Q9H467	287 aa		6.24	□□□□□ -1.41
ATL1-208	ENST00000556067	ACAD9	Q9H845	621 aa		6.24	□□□□□ -1.41
ATL1-208	ENST00000556067	GRPEL1	Q9HAV7	217 aa		6.24	□□□□□ -1.41
ATL1-208	ENST00000556067	ANO10	Q9NW15	660 aa		6.24	□□□□□ -1.41
ATL1-208	ENST00000556067	KLF15	Q9UIH9	416 aa		6.24	□□□□□ -1.41
ATL1-208	ENST00000556067	PCDHA12	Q9UN75	941 aa		6.24	□□□□□ -1.41
ATL1-208	ENST00000556067	AGTPBP1	Q9UPW5	1226 aa		6.24	□□□□□ -1.41
ATL1-208	ENST00000556067	HPSE	Q9Y251	543 aa		6.24	□□□□□ -1.41
ATL1-208	ENST00000556067	USP20	Q9Y2K6	914 aa		6.24	□□□□□ -1.41
ATL1-208	ENST00000556067	WDR90	Q96KV7	1748 aa		6.24	□□□□□ -1.41
ATL1-208	ENST00000556067	BAZ2B	Q9UIF8	2168 aa	Known RBP	6.23	□□□□□ -1.41
ATL1-208	ENST00000556067	BECN2	A8MW95	431 aa		6.23	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 1429.7 ms