RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 TUT1Q9H6E5 874 aaKnown RBP12.45□□□□□ -0.42
SHMT2-220ENST00000555634 ATP6V0A4Q9HBG4 840 aa12.45□□□□□ -0.42
SHMT2-220ENST00000555634 KBTBD4Q9NVX7 518 aa12.45□□□□□ -0.42
SHMT2-220ENST00000555634 KCNG1Q9UIX4 513 aa12.45□□□□□ -0.42
SHMT2-220ENST00000555634 ODF2LQ9ULJ1 636 aa12.45□□□□□ -0.42
SHMT2-220ENST00000555634 EVPLQ92817 2033 aa12.44□□□□□ -0.42
SHMT2-220ENST00000555634 SCN10AQ9Y5Y9 1956 aa12.44□□□□□ -0.42
SHMT2-220ENST00000555634 MOXD2PA6NHM9 499 aa12.44□□□□□ -0.42
SHMT2-220ENST00000555634 USO1O60763 962 aaKnown RBP12.44□□□□□ -0.42
SHMT2-220ENST00000555634 FAM13AO94988 1023 aa12.44□□□□□ -0.42
SHMT2-220ENST00000555634 KIF20AO95235 890 aa12.44□□□□□ -0.42
SHMT2-220ENST00000555634 F2P00734 622 aa12.44□□□□□ -0.42
SHMT2-220ENST00000555634 HOXD8P13378 290 aaPredicted RBP12.44□□□□□ -0.42
SHMT2-220ENST00000555634 IDEP14735 1019 aa12.44□□□□□ -0.42
SHMT2-220ENST00000555634 GAP43P17677 238 aa12.44□□□□□ -0.42
SHMT2-220ENST00000555634 CST5P28325 142 aaPredicted RBP12.44□□□□□ -0.42
SHMT2-220ENST00000555634 ABCD1P33897 745 aa12.44□□□□□ -0.42
SHMT2-220ENST00000555634 PPP1R2P41236 205 aa12.44□□□□□ -0.42
SHMT2-220ENST00000555634 RARRES1P49788 294 aa12.44□□□□□ -0.42
SHMT2-220ENST00000555634 DNM2P50570 870 aa12.44□□□□□ -0.42
SHMT2-220ENST00000555634 TRIM32Q13049 653 aa12.44□□□□□ -0.42
SHMT2-220ENST00000555634 PNOCQ13519 176 aa12.44□□□□□ -0.42
SHMT2-220ENST00000555634 ZSCAN23Q3MJ62 389 aa12.44□□□□□ -0.42
SHMT2-220ENST00000555634 MTERF2Q49AM1 385 aa12.44□□□□□ -0.42
SHMT2-220ENST00000555634 CNNM4Q6P4Q7 775 aa12.44□□□□□ -0.42
SHMT2-220ENST00000555634 PADI6Q6TGC4 694 aa12.44□□□□□ -0.42
SHMT2-220ENST00000555634 TRIM50Q86XT4 487 aa12.44□□□□□ -0.42
SHMT2-220ENST00000555634 TRIML1Q8N9V2 468 aa12.44□□□□□ -0.42
SHMT2-220ENST00000555634 SLC17A8Q8NDX2 589 aa12.44□□□□□ -0.42
SHMT2-220ENST00000555634 TRPV1Q8NER1 839 aa12.44□□□□□ -0.42
SHMT2-220ENST00000555634 TCP11Q8WWU5 503 aa12.44□□□□□ -0.42
SHMT2-220ENST00000555634 MTRQ99707 1265 aa12.44□□□□□ -0.42
SHMT2-220ENST00000555634 MTG1Q9BT17 334 aaPredicted RBP12.44□□□□□ -0.42
SHMT2-220ENST00000555634 NAT10Q9H0A0 1025 aaKnown RBP12.44□□□□□ -0.42
SHMT2-220ENST00000555634 ZHX3Q9H4I2 956 aa12.44□□□□□ -0.42
SHMT2-220ENST00000555634 PRDM10Q9NQV6 1147 aa12.44□□□□□ -0.42
SHMT2-220ENST00000555634 CYP26B1Q9NR63 512 aa12.44□□□□□ -0.42
SHMT2-220ENST00000555634 COL4A3BPQ9Y5P4 624 aa12.44□□□□□ -0.42
SHMT2-220ENST00000555634 H0YCG3 227 aa12.43□□□□□ -0.42
SHMT2-220ENST00000555634 ADCY6O43306 1168 aa12.43□□□□□ -0.42
SHMT2-220ENST00000555634 PGK1P00558 417 aa12.43□□□□□ -0.42
SHMT2-220ENST00000555634 RPN1P04843 607 aaKnown RBP12.43□□□□□ -0.42
SHMT2-220ENST00000555634 CCL5P13501 91 aa12.43□□□□□ -0.42
SHMT2-220ENST00000555634 CAPN2P17655 700 aa12.43□□□□□ -0.42
SHMT2-220ENST00000555634 TMOD1P28289 359 aa12.43□□□□□ -0.42
SHMT2-220ENST00000555634 SLC12A3P55017 1021 aa12.43□□□□□ -0.42
SHMT2-220ENST00000555634 CAP1Q01518 475 aa12.43□□□□□ -0.42
SHMT2-220ENST00000555634 PPFIA1Q13136 1202 aa12.43□□□□□ -0.42
SHMT2-220ENST00000555634 MFSD10Q14728 455 aa12.43□□□□□ -0.42
SHMT2-220ENST00000555634 PPP2R5AQ15172 486 aa12.43□□□□□ -0.42
SHMT2-220ENST00000555634 STX1AQ16623 288 aa12.43□□□□□ -0.42
SHMT2-220ENST00000555634 NAALADL2Q58DX5 795 aa12.43□□□□□ -0.42
SHMT2-220ENST00000555634 ZNF484Q5JVG2 852 aa12.43□□□□□ -0.42
SHMT2-220ENST00000555634 PLA2G4FQ68DD2 849 aa12.43□□□□□ -0.42
SHMT2-220ENST00000555634 C7orf31Q8N865 590 aa12.43□□□□□ -0.42
SHMT2-220ENST00000555634 DDX12PQ92771 950 aa12.43□□□□□ -0.42
SHMT2-220ENST00000555634 KIFAP3Q92845 792 aa12.43□□□□□ -0.42
SHMT2-220ENST00000555634 IFT74Q96LB3 600 aa12.43□□□□□ -0.42
SHMT2-220ENST00000555634 GLT1D1Q96MS3 346 aa12.43□□□□□ -0.42
SHMT2-220ENST00000555634 NIFKQ9BYG3 293 aaKnown RBP12.43□□□□□ -0.42
SHMT2-220ENST00000555634 TRIM9Q9C026 710 aa12.43□□□□□ -0.42
SHMT2-220ENST00000555634 RNF208Q9H0X6 261 aa12.43□□□□□ -0.42
SHMT2-220ENST00000555634 GZF1Q9H116 711 aaPredicted RBP12.43□□□□□ -0.42
SHMT2-220ENST00000555634 BLOC1S4Q9NUP1 217 aa12.43□□□□□ -0.42
SHMT2-220ENST00000555634 TMEM63CQ9P1W3 806 aa12.43□□□□□ -0.42
SHMT2-220ENST00000555634 KIAA1468Q9P260 1216 aa12.43□□□□□ -0.42
SHMT2-220ENST00000555634 SIP14410 1827 aa12.43□□□□□ -0.42
SHMT2-220ENST00000555634 PHLPP2Q6ZVD8 1323 aa12.42□□□□□ -0.42
SHMT2-220ENST00000555634 PVALEFA0A1B0GWK0 134 aa12.42□□□□□ -0.42
SHMT2-220ENST00000555634 SYCE3A1L190 88 aa12.42□□□□□ -0.42
SHMT2-220ENST00000555634 RRN3P2A6NIE6 340 aa12.42□□□□□ -0.42
SHMT2-220ENST00000555634 MAGEB2O15479 319 aa12.42□□□□□ -0.42
SHMT2-220ENST00000555634 RPLP2P05387 115 aaKnown RBP12.42□□□□□ -0.42
SHMT2-220ENST00000555634 SCP2P22307 547 aa12.42□□□□□ -0.42
SHMT2-220ENST00000555634 GUCY2CP25092 1073 aa12.42□□□□□ -0.42
SHMT2-220ENST00000555634 PSEN2P49810 448 aa12.42□□□□□ -0.42
SHMT2-220ENST00000555634 BEX3Q00994 111 aa12.42□□□□□ -0.42
SHMT2-220ENST00000555634 DMP1Q13316 513 aaPredicted RBP12.42□□□□□ -0.42
SHMT2-220ENST00000555634 EMC2Q15006 297 aa12.42□□□□□ -0.42
SHMT2-220ENST00000555634 ECM1Q16610 540 aa12.42□□□□□ -0.42
SHMT2-220ENST00000555634 UNC13DQ70J99 1090 aa12.42□□□□□ -0.42
SHMT2-220ENST00000555634 DYMQ7RTS9 669 aa12.42□□□□□ -0.42
SHMT2-220ENST00000555634 KCNK18Q7Z418 384 aa12.42□□□□□ -0.42
SHMT2-220ENST00000555634 VTI1AQ96AJ9 217 aa12.42□□□□□ -0.42
SHMT2-220ENST00000555634 MAP7D2Q96T17 732 aa12.42□□□□□ -0.42
SHMT2-220ENST00000555634 C7orf25Q9BPX7 421 aa12.42□□□□□ -0.42
SHMT2-220ENST00000555634 TSEN34Q9BSV6 310 aaKnown RBP12.42□□□□□ -0.42
SHMT2-220ENST00000555634 SEZ6LQ9BYH1 1024 aa12.42□□□□□ -0.42
SHMT2-220ENST00000555634 BCAS3Q9H6U6 928 aa12.42□□□□□ -0.42
SHMT2-220ENST00000555634 PARVGQ9HBI0 331 aa12.42□□□□□ -0.42
SHMT2-220ENST00000555634 ANO10Q9NW15 660 aa12.42□□□□□ -0.42
SHMT2-220ENST00000555634 LARSQ9P2J5 1176 aaKnown RBP12.42□□□□□ -0.42
SHMT2-220ENST00000555634 SEL1LQ9UBV2 794 aa12.42□□□□□ -0.42
SHMT2-220ENST00000555634 NRCAMQ92823 1304 aa12.41□□□□□ -0.42
SHMT2-220ENST00000555634 DNM1LO00429 736 aa12.41□□□□□ -0.42
SHMT2-220ENST00000555634 ZNF862O60290 1169 aa12.41□□□□□ -0.42
SHMT2-220ENST00000555634 ADAMTS4O75173 837 aa12.41□□□□□ -0.42
SHMT2-220ENST00000555634 CAVIN2O95810 425 aa12.41□□□□□ -0.42
SHMT2-220ENST00000555634 CYP11B2P19099 503 aa12.41□□□□□ -0.42
SHMT2-220ENST00000555634 SMTNP53814 917 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms