RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 ZNF589Q86UQ0 364 aaPredicted RBP10.59□□□□□ -0.71
PRKCH-218ENST00000555628 PRR7Q8TB68 274 aa10.59□□□□□ -0.71
PRKCH-218ENST00000555628 IGFLR1Q9H665 355 aa10.59□□□□□ -0.71
PRKCH-218ENST00000555628 TLR9Q9NR96 1032 aa10.59□□□□□ -0.71
PRKCH-218ENST00000555628 SETD4Q9NVD3 440 aa10.59□□□□□ -0.71
PRKCH-218ENST00000555628 MRPL11Q9Y3B7 192 aaKnown RBP10.59□□□□□ -0.71
PRKCH-218ENST00000555628 TPRP12270 2363 aaKnown RBP10.59□□□□□ -0.71
PRKCH-218ENST00000555628 CCDC171Q6TFL3 1326 aa10.58□□□□□ -0.71
PRKCH-218ENST00000555628 OTOGLQ3ZCN5 2332 aa10.58□□□□□ -0.72
PRKCH-218ENST00000555628 FNDC1Q4ZHG4 1894 aaPredicted RBP10.58□□□□□ -0.72
PRKCH-218ENST00000555628 GHRP10912 638 aa10.58□□□□□ -0.72
PRKCH-218ENST00000555628 PCP11498 1178 aaKnown RBP10.58□□□□□ -0.72
PRKCH-218ENST00000555628 NRIP1P48552 1158 aa10.58□□□□□ -0.72
PRKCH-218ENST00000555628 RPIAP49247 311 aa10.58□□□□□ -0.72
PRKCH-218ENST00000555628 RRP12Q5JTH9 1297 aaKnown RBP10.58□□□□□ -0.72
PRKCH-218ENST00000555628 FBXO47Q5MNV8 452 aa10.58□□□□□ -0.72
PRKCH-218ENST00000555628 RTN4RL1Q86UN2 441 aaPredicted RBP10.58□□□□□ -0.72
PRKCH-218ENST00000555628 DGKHQ86XP1 1220 aa10.58□□□□□ -0.72
PRKCH-218ENST00000555628 CMTR2Q8IYT2 770 aaKnown RBP10.58□□□□□ -0.72
PRKCH-218ENST00000555628 PNMA1Q8ND90 353 aa10.58□□□□□ -0.72
PRKCH-218ENST00000555628 ATOH1Q92858 354 aaPredicted RBP10.58□□□□□ -0.72
PRKCH-218ENST00000555628 FAM227BQ96M60 508 aa10.58□□□□□ -0.72
PRKCH-218ENST00000555628 INPP4AQ96PE3 977 aaPredicted RBP10.58□□□□□ -0.72
PRKCH-218ENST00000555628 GPR20Q99678 358 aa10.58□□□□□ -0.72
PRKCH-218ENST00000555628 IRF2BPLQ9H1B7 796 aa10.58□□□□□ -0.72
PRKCH-218ENST00000555628 S1PR5Q9H228 398 aa10.58□□□□□ -0.72
PRKCH-218ENST00000555628 AGO3Q9H9G7 860 aaKnown RBP10.58□□□□□ -0.72
PRKCH-218ENST00000555628 LOXHD1Q8IVV2 1947 aa10.57□□□□□ -0.72
PRKCH-218ENST00000555628 MBLAC1A4D2B0 266 aaPredicted RBP10.57□□□□□ -0.72
PRKCH-218ENST00000555628 CSPG5O95196 566 aa10.57□□□□□ -0.72
PRKCH-218ENST00000555628 HAND2P61296 217 aa10.57□□□□□ -0.72
PRKCH-218ENST00000555628 MRPS9P82933 396 aaKnown RBP10.57□□□□□ -0.72
PRKCH-218ENST00000555628 HNRNPUQ00839 825 aaKnown RBP eCLIP10.57□□□□□ -0.72
PRKCH-218ENST00000555628 BTG3Q14201 252 aaPredicted RBP10.57□□□□□ -0.72
PRKCH-218ENST00000555628 QPCTQ16769 361 aa10.57□□□□□ -0.72
PRKCH-218ENST00000555628 ASPRV1Q53RT3 343 aa10.57□□□□□ -0.72
PRKCH-218ENST00000555628 METTL7BQ6UX53 244 aa10.57□□□□□ -0.72
PRKCH-218ENST00000555628 TMEM105Q8N8V8 129 aa10.57□□□□□ -0.72
PRKCH-218ENST00000555628 KLHL23Q8NBE8 558 aa10.57□□□□□ -0.72
PRKCH-218ENST00000555628 POF1BQ8WVV4 589 aa10.57□□□□□ -0.72
PRKCH-218ENST00000555628 USP26Q9BXU7 913 aa10.57□□□□□ -0.72
PRKCH-218ENST00000555628 HELLSQ9NRZ9 838 aa10.57□□□□□ -0.72
PRKCH-218ENST00000555628 MAP3K20Q9NYL2 800 aaKnown RBP10.57□□□□□ -0.72
PRKCH-218ENST00000555628 ACACBO00763 2458 aa10.57□□□□□ -0.72
PRKCH-218ENST00000555628 KAT6AQ92794 2004 aa10.57□□□□□ -0.72
PRKCH-218ENST00000555628 MYO10Q9HD67 2058 aa10.56□□□□□ -0.72
PRKCH-218ENST00000555628 SPATA31C2B4DYI2 1134 aa10.56□□□□□ -0.72
PRKCH-218ENST00000555628 CFAP99D6REC4 459 aa10.56□□□□□ -0.72
PRKCH-218ENST00000555628 LCE2BO14633 110 aa10.56□□□□□ -0.72
PRKCH-218ENST00000555628 FSCN2O14926 492 aa10.56□□□□□ -0.72
PRKCH-218ENST00000555628 GDF9O60383 454 aa10.56□□□□□ -0.72
PRKCH-218ENST00000555628 CD2BP2O95400 341 aaKnown RBP10.56□□□□□ -0.72
PRKCH-218ENST00000555628 CFBP00751 764 aa10.56□□□□□ -0.72
PRKCH-218ENST00000555628 MX1P20591 662 aa10.56□□□□□ -0.72
PRKCH-218ENST00000555628 HOXA13P31271 388 aaPredicted RBP10.56□□□□□ -0.72
PRKCH-218ENST00000555628 DUSP6Q16828 381 aa10.56□□□□□ -0.72
PRKCH-218ENST00000555628 MARCH8Q5T0T0 291 aa10.56□□□□□ -0.72
PRKCH-218ENST00000555628 TMEM184AQ6ZMB5 413 aa10.56□□□□□ -0.72
PRKCH-218ENST00000555628 ENAHQ8N8S7 591 aaPredicted RBP10.56□□□□□ -0.72
PRKCH-218ENST00000555628 RPGRIP1Q96KN7 1286 aa10.56□□□□□ -0.72
PRKCH-218ENST00000555628 RIPOR3Q96MK2 946 aa10.56□□□□□ -0.72
PRKCH-218ENST00000555628 ZKSCAN3Q9BRR0 538 aa10.56□□□□□ -0.72
PRKCH-218ENST00000555628 CHMP4BQ9H444 224 aaKnown RBP10.56□□□□□ -0.72
PRKCH-218ENST00000555628 TOMM22Q9NS69 142 aa10.56□□□□□ -0.72
PRKCH-218ENST00000555628 PKD2L1Q9P0L9 805 aa10.56□□□□□ -0.72
PRKCH-218ENST00000555628 NRCAMQ92823 1304 aa10.56□□□□□ -0.72
PRKCH-218ENST00000555628 DENND4AQ7Z401 1863 aa10.55□□□□□ -0.72
PRKCH-218ENST00000555628 GNAT1P11488 350 aa10.55□□□□□ -0.72
PRKCH-218ENST00000555628 MYCLP12524 364 aaPredicted RBP10.55□□□□□ -0.72
PRKCH-218ENST00000555628 GATMP50440 423 aa10.55□□□□□ -0.72
PRKCH-218ENST00000555628 ARHGAP4P98171 946 aa10.55□□□□□ -0.72
PRKCH-218ENST00000555628 FOXC1Q12948 553 aa10.55□□□□□ -0.72
PRKCH-218ENST00000555628 TAF2Q6P1X5 1199 aa10.55□□□□□ -0.72
PRKCH-218ENST00000555628 SYCE2Q6PIF2 218 aa10.55□□□□□ -0.72
PRKCH-218ENST00000555628 TSHZ1Q6ZSZ6 1077 aa10.55□□□□□ -0.72
PRKCH-218ENST00000555628 STAG2Q8N3U4 1231 aa10.55□□□□□ -0.72
PRKCH-218ENST00000555628 SAMD3Q8N6K7 520 aa10.55□□□□□ -0.72
PRKCH-218ENST00000555628 AMNQ9BXJ7 453 aa10.55□□□□□ -0.72
PRKCH-218ENST00000555628 BAZ2BQ9UIF8 2168 aaKnown RBP10.55□□□□□ -0.72
PRKCH-218ENST00000555628 GPR179Q6PRD1 2367 aa10.54□□□□□ -0.72
PRKCH-218ENST00000555628 CHD6Q8TD26 2715 aa10.54□□□□□ -0.72
PRKCH-218ENST00000555628 NRG2O14511 850 aaPredicted RBP10.54□□□□□ -0.72
PRKCH-218ENST00000555628 ZBTB24O43167 697 aaPredicted RBP10.54□□□□□ -0.72
PRKCH-218ENST00000555628 BRD1O95696 1058 aa10.54□□□□□ -0.72
PRKCH-218ENST00000555628 ARP10275 920 aa10.54□□□□□ -0.72
PRKCH-218ENST00000555628 CCND2P30279 289 aa10.54□□□□□ -0.72
PRKCH-218ENST00000555628 NT5C2P49902 561 aa10.54□□□□□ -0.72
PRKCH-218ENST00000555628 Q6ZNB5 142 aa10.54□□□□□ -0.72
PRKCH-218ENST00000555628 MFSD6Q6ZSS7 791 aa10.54□□□□□ -0.72
PRKCH-218ENST00000555628 RBM23Q86U06 439 aaKnown RBP10.54□□□□□ -0.72
PRKCH-218ENST00000555628 TICAM2Q86XR7 235 aa10.54□□□□□ -0.72
PRKCH-218ENST00000555628 NPAS4Q8IUM7 802 aa10.54□□□□□ -0.72
PRKCH-218ENST00000555628 RASGRP4Q8TDF6 673 aa10.54□□□□□ -0.72
PRKCH-218ENST00000555628 PPP2R3CQ969Q6 453 aa10.54□□□□□ -0.72
PRKCH-218ENST00000555628 TMX1Q9H3N1 280 aa10.54□□□□□ -0.72
PRKCH-218ENST00000555628 SMOC2Q9H3U7 446 aa10.54□□□□□ -0.72
PRKCH-218ENST00000555628 MLXIPQ9HAP2 919 aa10.54□□□□□ -0.72
PRKCH-218ENST00000555628 PER2O15055 1255 aa10.53□□□□□ -0.72
PRKCH-218ENST00000555628 ZBTB5O15062 677 aa10.53□□□□□ -0.72
PRKCH-218ENST00000555628 LILRB3O75022 631 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms