RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 DKC1O60832 514 aaKnown RBP eCLIP11.34□□□□□ -0.59
SRP54-208ENST00000555557 OATP04181 439 aa11.34□□□□□ -0.59
SRP54-208ENST00000555557 XRCC6P12956 609 aaKnown RBP eCLIP11.34□□□□□ -0.59
SRP54-208ENST00000555557 CNGA1P29973 690 aa11.34□□□□□ -0.59
SRP54-208ENST00000555557 CACNB2Q08289 660 aaPredicted RBP11.34□□□□□ -0.59
SRP54-208ENST00000555557 COASYQ13057 564 aa11.34□□□□□ -0.59
SRP54-208ENST00000555557 KCNB1Q14721 858 aa11.34□□□□□ -0.59
SRP54-208ENST00000555557 XKR3Q5GH77 459 aa11.34□□□□□ -0.59
SRP54-208ENST00000555557 ZNF658Q5TYW1 1059 aaPredicted RBP11.34□□□□□ -0.59
SRP54-208ENST00000555557 FAM160B1Q5W0V3 765 aa11.34□□□□□ -0.59
SRP54-208ENST00000555557 KLHL10Q6JEL2 608 aa11.34□□□□□ -0.59
SRP54-208ENST00000555557 OTUD6AQ7L8S5 288 aa11.34□□□□□ -0.59
SRP54-208ENST00000555557 GLIS3Q8NEA6 775 aa11.34□□□□□ -0.59
SRP54-208ENST00000555557 FAM200AQ8TCP9 573 aa11.34□□□□□ -0.59
SRP54-208ENST00000555557 RAET1EQ8TD07 263 aa11.34□□□□□ -0.59
SRP54-208ENST00000555557 AFAP1L1Q8TED9 768 aa11.34□□□□□ -0.59
SRP54-208ENST00000555557 EMID1Q96A84 441 aaPredicted RBP11.34□□□□□ -0.59
SRP54-208ENST00000555557 ANKEF1Q9NU02 776 aa11.34□□□□□ -0.59
SRP54-208ENST00000555557 FAM184BQ9ULE4 1060 aa11.34□□□□□ -0.59
SRP54-208ENST00000555557 PPP1R3GB7ZBB8 358 aa11.33□□□□□ -0.6
SRP54-208ENST00000555557 NKRFO15226 690 aaKnown RBP eCLIP11.33□□□□□ -0.6
SRP54-208ENST00000555557 ADCY3O60266 1144 aa11.33□□□□□ -0.6
SRP54-208ENST00000555557 LGR5O75473 907 aa11.33□□□□□ -0.6
SRP54-208ENST00000555557 ZNF286BP0CG31 522 aa11.33□□□□□ -0.6
SRP54-208ENST00000555557 CYBAP13498 195 aa11.33□□□□□ -0.6
SRP54-208ENST00000555557 PRCPP42785 496 aa11.33□□□□□ -0.6
SRP54-208ENST00000555557 SOX10P56693 466 aa11.33□□□□□ -0.6
SRP54-208ENST00000555557 MTERF2Q49AM1 385 aa11.33□□□□□ -0.6
SRP54-208ENST00000555557 HERC4Q5GLZ8 1057 aaPredicted RBP11.33□□□□□ -0.6
SRP54-208ENST00000555557 TLK2Q86UE8 772 aa11.33□□□□□ -0.6
SRP54-208ENST00000555557 MLKLQ8NB16 471 aa11.33□□□□□ -0.6
SRP54-208ENST00000555557 FGFBP2Q9BYJ0 223 aa11.33□□□□□ -0.6
SRP54-208ENST00000555557 GRPEL1Q9HAV7 217 aa11.33□□□□□ -0.6
SRP54-208ENST00000555557 CYP26B1Q9NR63 512 aa11.33□□□□□ -0.6
SRP54-208ENST00000555557 WBP1LQ9NX94 342 aa11.33□□□□□ -0.6
SRP54-208ENST00000555557 HIP1RO75146 1068 aa11.33□□□□□ -0.6
SRP54-208ENST00000555557 LGALS2P05162 132 aa11.33□□□□□ -0.6
SRP54-208ENST00000555557 MMP3P08254 477 aa11.33□□□□□ -0.6
SRP54-208ENST00000555557 CCND3P30281 292 aaPredicted RBP11.33□□□□□ -0.6
SRP54-208ENST00000555557 STX17P56962 302 aa11.33□□□□□ -0.6
SRP54-208ENST00000555557 EHHADHQ08426 723 aa11.33□□□□□ -0.6
SRP54-208ENST00000555557 IRF5Q13568 498 aa11.33□□□□□ -0.6
SRP54-208ENST00000555557 IQCB1Q15051 598 aa11.33□□□□□ -0.6
SRP54-208ENST00000555557 LRRC41Q15345 812 aa11.33□□□□□ -0.6
SRP54-208ENST00000555557 PLPPR4Q7Z2D5 763 aa11.33□□□□□ -0.6
SRP54-208ENST00000555557 DHX40Q8IX18 779 aaKnown RBP11.33□□□□□ -0.6
SRP54-208ENST00000555557 CCDC65Q8IXS2 484 aa11.33□□□□□ -0.6
SRP54-208ENST00000555557 AOPEPQ8N6M6 819 aa11.33□□□□□ -0.6
SRP54-208ENST00000555557 KIAA0895Q8NCT3 520 aa11.33□□□□□ -0.6
SRP54-208ENST00000555557 CCDC47Q96A33 483 aaKnown RBP11.33□□□□□ -0.6
SRP54-208ENST00000555557 RNPEPQ9H4A4 650 aa11.33□□□□□ -0.6
SRP54-208ENST00000555557 GPRC5CQ9NQ84 441 aa11.33□□□□□ -0.6
SRP54-208ENST00000555557 FRMD3A2A2Y4 597 aa11.32□□□□□ -0.6
SRP54-208ENST00000555557 PPFIA4O75335 1185 aa11.32□□□□□ -0.6
SRP54-208ENST00000555557 TBCAO75347 108 aaKnown RBP11.32□□□□□ -0.6
SRP54-208ENST00000555557 PRKAR2AP13861 404 aaKnown RBP11.32□□□□□ -0.6
SRP54-208ENST00000555557 AKR1A1P14550 325 aa11.32□□□□□ -0.6
SRP54-208ENST00000555557 GUCY2CP25092 1073 aa11.32□□□□□ -0.6
SRP54-208ENST00000555557 BEX3Q00994 111 aa11.32□□□□□ -0.6
SRP54-208ENST00000555557 PLCB4Q15147 1175 aa11.32□□□□□ -0.6
SRP54-208ENST00000555557 SFR1Q86XK3 245 aa11.32□□□□□ -0.6
SRP54-208ENST00000555557 TRMT44Q8IYL2 757 aaKnown RBP11.32□□□□□ -0.6
SRP54-208ENST00000555557 DAW1Q8N136 415 aa11.32□□□□□ -0.6
SRP54-208ENST00000555557 MED15Q96RN5 788 aa11.32□□□□□ -0.6
SRP54-208ENST00000555557 C16orf70Q9BSU1 422 aa11.32□□□□□ -0.6
SRP54-208ENST00000555557 NAT10Q9H0A0 1025 aaKnown RBP11.32□□□□□ -0.6
SRP54-208ENST00000555557 SMARCAD1Q9H4L7 1026 aa11.32□□□□□ -0.6
SRP54-208ENST00000555557 NRBP2Q9NSY0 501 aa11.32□□□□□ -0.6
SRP54-208ENST00000555557 TRIM17Q9Y577 477 aa11.32□□□□□ -0.6
SRP54-208ENST00000555557 PCDHA2Q9Y5H9 948 aa11.32□□□□□ -0.6
SRP54-208ENST00000555557 EMSYQ7Z589 1322 aa11.32□□□□□ -0.6
SRP54-208ENST00000555557 FAM13AO94988 1023 aa11.31□□□□□ -0.6
SRP54-208ENST00000555557 CHMP4BP1P59074 171 aa11.31□□□□□ -0.6
SRP54-208ENST00000555557 MAPK7Q13164 816 aa11.31□□□□□ -0.6
SRP54-208ENST00000555557 DGKDQ16760 1214 aa11.31□□□□□ -0.6
SRP54-208ENST00000555557 FAM26FQ5R3K3 315 aa11.31□□□□□ -0.6
SRP54-208ENST00000555557 FAM102BQ5T8I3 360 aa11.31□□□□□ -0.6
SRP54-208ENST00000555557 MYCT1Q8N699 235 aa11.31□□□□□ -0.6
SRP54-208ENST00000555557 PPP1R13LQ8WUF5 828 aa11.31□□□□□ -0.6
SRP54-208ENST00000555557 CEP89Q96ST8 783 aa11.31□□□□□ -0.6
SRP54-208ENST00000555557 NIFKQ9BYG3 293 aaKnown RBP11.31□□□□□ -0.6
SRP54-208ENST00000555557 KCND2Q9NZV8 630 aa11.31□□□□□ -0.6
SRP54-208ENST00000555557 MYADML2A6NDP7 307 aa11.31□□□□□ -0.6
SRP54-208ENST00000555557 A6NJR5 290 aa11.31□□□□□ -0.6
SRP54-208ENST00000555557 BECN2A8MW95 431 aa11.31□□□□□ -0.6
SRP54-208ENST00000555557 CAVIN2O95810 425 aa11.31□□□□□ -0.6
SRP54-208ENST00000555557 GNRH1P01148 92 aa11.31□□□□□ -0.6
SRP54-208ENST00000555557 CASP5P51878 434 aa11.31□□□□□ -0.6
SRP54-208ENST00000555557 ADSSL1Q8N142 457 aa11.31□□□□□ -0.6
SRP54-208ENST00000555557 ATP8B4Q8TF62 1192 aa11.31□□□□□ -0.6
SRP54-208ENST00000555557 TRAPPC12Q8WVT3 735 aa11.31□□□□□ -0.6
SRP54-208ENST00000555557 BBXQ8WY36 941 aaPredicted RBP11.31□□□□□ -0.6
SRP54-208ENST00000555557 ZBTB10Q96DT7 871 aa11.31□□□□□ -0.6
SRP54-208ENST00000555557 AP5M1Q9H0R1 490 aa11.31□□□□□ -0.6
SRP54-208ENST00000555557 PARVGQ9HBI0 331 aa11.31□□□□□ -0.6
SRP54-208ENST00000555557 XPNPEP1Q9NQW7 623 aa11.31□□□□□ -0.6
SRP54-208ENST00000555557 PDLIM7Q9NR12 457 aa11.31□□□□□ -0.6
SRP54-208ENST00000555557 ERAP1Q9NZ08 941 aa11.31□□□□□ -0.6
SRP54-208ENST00000555557 NRBP1Q9UHY1 535 aa11.31□□□□□ -0.6
SRP54-208ENST00000555557 DACH1Q9UI36 760 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms