RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 TTC12Q9H892 705 aaPredicted RBP13.58□□□□□ -0.24
SRP54-206ENST00000555317 TRPV2Q9Y5S1 764 aa13.58□□□□□ -0.24
SRP54-206ENST00000555317 CDY2AQ9Y6F7 541 aa13.58□□□□□ -0.24
SRP54-206ENST00000555317 MICAL3Q7RTP6 2002 aa13.57□□□□□ -0.24
SRP54-206ENST00000555317 LOXHD1Q8IVV2 1947 aa13.57□□□□□ -0.24
SRP54-206ENST00000555317 KIF28PB7ZC32 967 aa13.57□□□□□ -0.24
SRP54-206ENST00000555317 K7ELQ4 463 aaPredicted RBP13.57□□□□□ -0.24
SRP54-206ENST00000555317 EML1O00423 815 aa13.57□□□□□ -0.24
SRP54-206ENST00000555317 ZNF862O60290 1169 aa13.57□□□□□ -0.24
SRP54-206ENST00000555317 C22orf31O95567 290 aa13.57□□□□□ -0.24
SRP54-206ENST00000555317 CHRNA1P02708 482 aa13.57□□□□□ -0.24
SRP54-206ENST00000555317 P4HBP07237 508 aaKnown RBP13.57□□□□□ -0.24
SRP54-206ENST00000555317 HSP90AA1P07900 732 aaKnown RBP13.57□□□□□ -0.24
SRP54-206ENST00000555317 OR52Z1P0C646 297 aa13.57□□□□□ -0.24
SRP54-206ENST00000555317 GHRP10912 638 aa13.57□□□□□ -0.24
SRP54-206ENST00000555317 DNAJB2P25686 324 aa13.57□□□□□ -0.24
SRP54-206ENST00000555317 TMEM62Q0P6H9 643 aa13.57□□□□□ -0.24
SRP54-206ENST00000555317 EPHA7Q15375 998 aa13.57□□□□□ -0.24
SRP54-206ENST00000555317 MTERF2Q49AM1 385 aa13.57□□□□□ -0.24
SRP54-206ENST00000555317 FAM109BQ6ICB4 259 aaPredicted RBP13.57□□□□□ -0.24
SRP54-206ENST00000555317 B3GNT9Q6UX72 402 aa13.57□□□□□ -0.24
SRP54-206ENST00000555317 ERMNQ8TAM6 284 aa13.57□□□□□ -0.24
SRP54-206ENST00000555317 NEK9Q8TD19 979 aa13.57□□□□□ -0.24
SRP54-206ENST00000555317 TIFAQ96CG3 184 aa13.57□□□□□ -0.24
SRP54-206ENST00000555317 SCLT1Q96NL6 688 aa13.57□□□□□ -0.24
SRP54-206ENST00000555317 LXNQ9BS40 222 aa13.57□□□□□ -0.24
SRP54-206ENST00000555317 ZBED2Q9BTP6 218 aa13.57□□□□□ -0.24
SRP54-206ENST00000555317 AKT3Q9Y243 479 aa13.57□□□□□ -0.24
SRP54-206ENST00000555317 GINS2Q9Y248 185 aa13.57□□□□□ -0.24
SRP54-206ENST00000555317 GBF1Q92538 1859 aa13.57□□□□□ -0.24
SRP54-206ENST00000555317 TMEM265A0A087WTH1 108 aa13.56□□□□□ -0.24
SRP54-206ENST00000555317 VPS37CA5D8V6 355 aaPredicted RBP13.56□□□□□ -0.24
SRP54-206ENST00000555317 GRXCR1A8MXD5 290 aa13.56□□□□□ -0.24
SRP54-206ENST00000555317 ZBTB42B2RXF5 422 aa13.56□□□□□ -0.24
SRP54-206ENST00000555317 AMHP03971 560 aa13.56□□□□□ -0.24
SRP54-206ENST00000555317 DNM2P50570 870 aa13.56□□□□□ -0.24
SRP54-206ENST00000555317 WDR5P61964 334 aaKnown RBP13.56□□□□□ -0.24
SRP54-206ENST00000555317 CYP4A11Q02928 519 aa13.56□□□□□ -0.24
SRP54-206ENST00000555317 CUL4AQ13619 759 aa13.56□□□□□ -0.24
SRP54-206ENST00000555317 GPNMBQ14956 572 aa13.56□□□□□ -0.24
SRP54-206ENST00000555317 PLEKHG4Q58EX7 1191 aa13.56□□□□□ -0.24
SRP54-206ENST00000555317 EFCAB12Q6NXP0 572 aa13.56□□□□□ -0.24
SRP54-206ENST00000555317 TSHZ1Q6ZSZ6 1077 aa13.56□□□□□ -0.24
SRP54-206ENST00000555317 OTUD6AQ7L8S5 288 aa13.56□□□□□ -0.24
SRP54-206ENST00000555317 TPH2Q8IWU9 490 aa13.56□□□□□ -0.24
SRP54-206ENST00000555317 DBF4BQ8NFT6 615 aa13.56□□□□□ -0.24
SRP54-206ENST00000555317 PHOSPHO2Q8TCD6 241 aa13.56□□□□□ -0.24
SRP54-206ENST00000555317 VWCEQ96DN2 955 aa13.56□□□□□ -0.24
SRP54-206ENST00000555317 JPH2Q9BR39 696 aaPredicted RBP13.56□□□□□ -0.24
SRP54-206ENST00000555317 CELF4Q9BZC1 486 aaKnown RBP13.56□□□□□ -0.24
SRP54-206ENST00000555317 RAB34Q9BZG1 259 aa13.56□□□□□ -0.24
SRP54-206ENST00000555317 ZSWIM4Q9H7M6 989 aa13.56□□□□□ -0.24
SRP54-206ENST00000555317 SUGCTQ9HAC7 445 aa13.56□□□□□ -0.24
SRP54-206ENST00000555317 SIP14410 1827 aa13.55□□□□□ -0.24
SRP54-206ENST00000555317 WNT7AO00755 349 aa13.55□□□□□ -0.24
SRP54-206ENST00000555317 CLCN3P51790 818 aa13.55□□□□□ -0.24
SRP54-206ENST00000555317 CACNB1Q02641 598 aaPredicted RBP13.55□□□□□ -0.24
SRP54-206ENST00000555317 MGAT3Q09327 533 aa13.55□□□□□ -0.24
SRP54-206ENST00000555317 PAK2Q13177 524 aa13.55□□□□□ -0.24
SRP54-206ENST00000555317 LPIN1Q14693 890 aa13.55□□□□□ -0.24
SRP54-206ENST00000555317 RILPL1Q5EBL4 403 aa13.55□□□□□ -0.24
SRP54-206ENST00000555317 ODR4Q5SWX8 454 aa13.55□□□□□ -0.24
SRP54-206ENST00000555317 Q7L0L9 218 aa13.55□□□□□ -0.24
SRP54-206ENST00000555317 EXOC8Q8IYI6 725 aa13.55□□□□□ -0.24
SRP54-206ENST00000555317 KIAA0319LQ8IZA0 1049 aa13.55□□□□□ -0.24
SRP54-206ENST00000555317 ZNF710Q8N1W2 664 aa13.55□□□□□ -0.24
SRP54-206ENST00000555317 USP38Q8NB14 1042 aa13.55□□□□□ -0.24
SRP54-206ENST00000555317 SLC7A3Q8WY07 619 aa13.55□□□□□ -0.24
SRP54-206ENST00000555317 DYDC2Q96IM9 177 aa13.55□□□□□ -0.24
SRP54-206ENST00000555317 FAM161BQ96MY7 647 aa13.55□□□□□ -0.24
SRP54-206ENST00000555317 MTMR9Q96QG7 549 aa13.55□□□□□ -0.24
SRP54-206ENST00000555317 EIF2AK1Q9BQI3 630 aaKnown RBP13.55□□□□□ -0.24
SRP54-206ENST00000555317 NIFKQ9BYG3 293 aaKnown RBP13.55□□□□□ -0.24
SRP54-206ENST00000555317 PBX4Q9BYU1 374 aa13.55□□□□□ -0.24
SRP54-206ENST00000555317 TMEM60Q9H2L4 133 aa13.55□□□□□ -0.24
SRP54-206ENST00000555317 PCDHA11Q9Y5I1 949 aa13.55□□□□□ -0.24
SRP54-206ENST00000555317 POTEMA6NI47 508 aa13.54□□□□□ -0.24
SRP54-206ENST00000555317 LAD1O00515 517 aa13.54□□□□□ -0.24
SRP54-206ENST00000555317 TLL1O43897 1013 aa13.54□□□□□ -0.24
SRP54-206ENST00000555317 VTNP04004 478 aa13.54□□□□□ -0.24
SRP54-206ENST00000555317 YWHABP31946 246 aaKnown RBP13.54□□□□□ -0.24
SRP54-206ENST00000555317 PBX2P40425 430 aa13.54□□□□□ -0.24
SRP54-206ENST00000555317 TECP42680 631 aa13.54□□□□□ -0.24
SRP54-206ENST00000555317 RABGGTBP53611 331 aa13.54□□□□□ -0.24
SRP54-206ENST00000555317 POLGP54098 1239 aaPredicted RBP13.54□□□□□ -0.24
SRP54-206ENST00000555317 SPIRE1Q08AE8 756 aa13.54□□□□□ -0.24
SRP54-206ENST00000555317 CTTNQ14247 550 aaKnown RBP13.54□□□□□ -0.24
SRP54-206ENST00000555317 NBR1Q14596 966 aa13.54□□□□□ -0.24
SRP54-206ENST00000555317 FBXO47Q5MNV8 452 aa13.54□□□□□ -0.24
SRP54-206ENST00000555317 PLA2G4FQ68DD2 849 aa13.54□□□□□ -0.24
SRP54-206ENST00000555317 HERC6Q8IVU3 1022 aa13.54□□□□□ -0.24
SRP54-206ENST00000555317 C4orf19Q8IY42 314 aa13.54□□□□□ -0.24
SRP54-206ENST00000555317 MYOCDQ8IZQ8 938 aa13.54□□□□□ -0.24
SRP54-206ENST00000555317 LRRC71Q8N4P6 559 aa13.54□□□□□ -0.24
SRP54-206ENST00000555317 INTS4Q96HW7 963 aaKnown RBP13.54□□□□□ -0.24
SRP54-206ENST00000555317 CEP170P1Q96L14 293 aa13.54□□□□□ -0.24
SRP54-206ENST00000555317 PPP1R16BQ96T49 567 aa13.54□□□□□ -0.24
SRP54-206ENST00000555317 SLC28A3Q9HAS3 691 aa13.54□□□□□ -0.24
SRP54-206ENST00000555317 CYP26B1Q9NR63 512 aa13.54□□□□□ -0.24
SRP54-206ENST00000555317 FOXD4L1Q9NU39 408 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms