RNA–Protein interactions for RNA: ENST00000555055.5

XRCC3-211, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC3, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-211ENST00000555055 R3HDM1Q15032 1099 aaKnown RBP16.29■□□□□ 0.2
XRCC3-211ENST00000555055 ZNF662Q6ZS27 426 aa16.29■□□□□ 0.2
XRCC3-211ENST00000555055 TRIM59Q8IWR1 403 aa16.29■□□□□ 0.2
XRCC3-211ENST00000555055 EFCAB13Q8IY85 973 aa16.29■□□□□ 0.2
XRCC3-211ENST00000555055 RETREG2Q8NC44 543 aa16.29■□□□□ 0.2
XRCC3-211ENST00000555055 SUGCTQ9HAC7 445 aa16.29■□□□□ 0.2
XRCC3-211ENST00000555055 FEM1BQ9UK73 627 aa16.29■□□□□ 0.2
XRCC3-211ENST00000555055 MYO6Q9UM54 1294 aa16.29■□□□□ 0.2
XRCC3-211ENST00000555055 SAMM50Q9Y512 469 aa16.29■□□□□ 0.2
XRCC3-211ENST00000555055 MYH10P35580 1976 aa16.28■□□□□ 0.2
XRCC3-211ENST00000555055 ASTN1O14525 1302 aa16.28■□□□□ 0.2
XRCC3-211ENST00000555055 TISP43B9A030 160 aa16.28■□□□□ 0.2
XRCC3-211ENST00000555055 BUB1O43683 1085 aa16.28■□□□□ 0.2
XRCC3-211ENST00000555055 IPO7O95373 1038 aaKnown RBP16.28■□□□□ 0.2
XRCC3-211ENST00000555055 MYCLP12524 364 aaPredicted RBP16.28■□□□□ 0.2
XRCC3-211ENST00000555055 EPS15P42566 896 aa16.28■□□□□ 0.2
XRCC3-211ENST00000555055 PTGER2P43116 358 aa16.28■□□□□ 0.2
XRCC3-211ENST00000555055 RAPGEF1Q13905 1077 aa16.28■□□□□ 0.2
XRCC3-211ENST00000555055 KNOP1Q1ED39 458 aaKnown RBP16.28■□□□□ 0.2
XRCC3-211ENST00000555055 GJB7Q6PEY0 223 aa16.28■□□□□ 0.2
XRCC3-211ENST00000555055 FAM133AQ8N9E0 248 aa16.28■□□□□ 0.2
XRCC3-211ENST00000555055 RDH13Q8NBN7 331 aa16.28■□□□□ 0.2
XRCC3-211ENST00000555055 LXNQ9BS40 222 aa16.28■□□□□ 0.2
XRCC3-211ENST00000555055 IFIH1Q9BYX4 1025 aaKnown RBP16.28■□□□□ 0.2
XRCC3-211ENST00000555055 HAUS4Q9H6D7 363 aa16.28■□□□□ 0.2
XRCC3-211ENST00000555055 SMARCAL1Q9NZC9 954 aa16.28■□□□□ 0.2
XRCC3-211ENST00000555055 CNOT7Q9UIV1 285 aaKnown RBP16.28■□□□□ 0.2
XRCC3-211ENST00000555055 TBC1D12O60347 775 aa16.28■□□□□ 0.2
XRCC3-211ENST00000555055 EYA4O95677 639 aa16.28■□□□□ 0.2
XRCC3-211ENST00000555055 CXCR5P32302 372 aa16.28■□□□□ 0.2
XRCC3-211ENST00000555055 PTPROQ16827 1216 aa16.28■□□□□ 0.2
XRCC3-211ENST00000555055 KCTD19Q17RG1 926 aaPredicted RBP16.28■□□□□ 0.2
XRCC3-211ENST00000555055 NSMFQ6X4W1 530 aa16.28■□□□□ 0.2
XRCC3-211ENST00000555055 CLEC4DQ8WXI8 215 aa16.28■□□□□ 0.2
XRCC3-211ENST00000555055 CCDC102AQ96A19 550 aa16.28■□□□□ 0.2
XRCC3-211ENST00000555055 TAAR1Q96RJ0 339 aa16.28■□□□□ 0.2
XRCC3-211ENST00000555055 KCNH7Q9NS40 1196 aa16.28■□□□□ 0.2
XRCC3-211ENST00000555055 RIPK3Q9Y572 518 aa16.28■□□□□ 0.2
XRCC3-211ENST00000555055 CETN3O15182 167 aa16.27■□□□□ 0.2
XRCC3-211ENST00000555055 FAM13AO94988 1023 aa16.27■□□□□ 0.2
XRCC3-211ENST00000555055 VCAM1P19320 739 aa16.27■□□□□ 0.2
XRCC3-211ENST00000555055 SLC5A5Q92911 643 aa16.27■□□□□ 0.2
XRCC3-211ENST00000555055 EHD2Q9NZN4 543 aa16.27■□□□□ 0.2
XRCC3-211ENST00000555055 PCDHA13Q9Y5I0 950 aa16.27■□□□□ 0.2
XRCC3-211ENST00000555055 PITPNM2Q9BZ72 1349 aa16.27■□□□□ 0.19
XRCC3-211ENST00000555055 LRRIQ3A6PVS8 624 aaPredicted RBP16.27■□□□□ 0.19
XRCC3-211ENST00000555055 SHOX2O60902 331 aaPredicted RBP16.27■□□□□ 0.19
XRCC3-211ENST00000555055 USP14P54578 494 aa16.27■□□□□ 0.19
XRCC3-211ENST00000555055 KRT83P78385 493 aa16.27■□□□□ 0.19
XRCC3-211ENST00000555055 SPA17Q15506 151 aa16.27■□□□□ 0.19
XRCC3-211ENST00000555055 PDXDC1Q6P996 788 aa16.27■□□□□ 0.19
XRCC3-211ENST00000555055 TRAPPC11Q7Z392 1133 aa16.27■□□□□ 0.19
XRCC3-211ENST00000555055 MTMR14Q8NCE2 650 aa16.27■□□□□ 0.19
XRCC3-211ENST00000555055 AFAP1L1Q8TED9 768 aa16.27■□□□□ 0.19
XRCC3-211ENST00000555055 MMS19Q96T76 1030 aa16.27■□□□□ 0.19
XRCC3-211ENST00000555055 FAM204AQ9H8W3 233 aa16.27■□□□□ 0.19
XRCC3-211ENST00000555055 AJAP1Q9UKB5 411 aaPredicted RBP16.27■□□□□ 0.19
XRCC3-211ENST00000555055 TELO2Q9Y4R8 837 aa16.27■□□□□ 0.19
XRCC3-211ENST00000555055 A0A1W2PQJ5 194 aa16.26■□□□□ 0.19
XRCC3-211ENST00000555055 NCK2O43639 380 aa16.26■□□□□ 0.19
XRCC3-211ENST00000555055 KRT86O43790 486 aa16.26■□□□□ 0.19
XRCC3-211ENST00000555055 ICAM1P05362 532 aa16.26■□□□□ 0.19
XRCC3-211ENST00000555055 RPS6P62753 249 aaKnown RBP16.26■□□□□ 0.19
XRCC3-211ENST00000555055 IRX3P78415 501 aaPredicted RBP16.26■□□□□ 0.19
XRCC3-211ENST00000555055 MRPS9P82933 396 aaKnown RBP16.26■□□□□ 0.19
XRCC3-211ENST00000555055 ITGB3BPQ13352 177 aaPredicted RBP16.26■□□□□ 0.19
XRCC3-211ENST00000555055 FIGNQ5HY92 759 aa16.26■□□□□ 0.19
XRCC3-211ENST00000555055 HGSNATQ68CP4 663 aa16.26■□□□□ 0.19
XRCC3-211ENST00000555055 C1orf186Q6ZWK4 172 aa16.26■□□□□ 0.19
XRCC3-211ENST00000555055 FAM160B2Q86V87 743 aa16.26■□□□□ 0.19
XRCC3-211ENST00000555055 POLR3CQ9BUI4 534 aaPredicted RBP16.26■□□□□ 0.19
XRCC3-211ENST00000555055 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.26■□□□□ 0.19
XRCC3-211ENST00000555055 RPAP3Q9H6T3 665 aaPredicted RBP16.26■□□□□ 0.19
XRCC3-211ENST00000555055 SH2D4AQ9H788 454 aa16.26■□□□□ 0.19
XRCC3-211ENST00000555055 JADE2Q9NQC1 790 aa16.26■□□□□ 0.19
XRCC3-211ENST00000555055 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.26■□□□□ 0.19
XRCC3-211ENST00000555055 TGFB1I1O43294 461 aa16.26■□□□□ 0.19
XRCC3-211ENST00000555055 ZMYND10O75800 440 aa16.26■□□□□ 0.19
XRCC3-211ENST00000555055 NR3C1P04150 777 aa16.26■□□□□ 0.19
XRCC3-211ENST00000555055 SP4Q02446 784 aa16.26■□□□□ 0.19
XRCC3-211ENST00000555055 KIF5AQ12840 1032 aa16.26■□□□□ 0.19
XRCC3-211ENST00000555055 FKBP1CQ5VVH2 108 aa16.26■□□□□ 0.19
XRCC3-211ENST00000555055 EPM2AIP1Q7L775 607 aaPredicted RBP16.26■□□□□ 0.19
XRCC3-211ENST00000555055 SUGP1Q8IWZ8 645 aaKnown RBP16.26■□□□□ 0.19
XRCC3-211ENST00000555055 PRPF38AQ8NAV1 312 aaKnown RBP16.26■□□□□ 0.19
XRCC3-211ENST00000555055 NLGN2Q8NFZ4 835 aa16.26■□□□□ 0.19
XRCC3-211ENST00000555055 RUBCNQ92622 972 aa16.26■□□□□ 0.19
XRCC3-211ENST00000555055 ATG4CQ96DT6 458 aa16.26■□□□□ 0.19
XRCC3-211ENST00000555055 FER1L6Q2WGJ9 1857 aa16.25■□□□□ 0.19
XRCC3-211ENST00000555055 ZNF541Q9H0D2 1346 aa16.25■□□□□ 0.19
XRCC3-211ENST00000555055 ATP9AO75110 1047 aa16.25■□□□□ 0.19
XRCC3-211ENST00000555055 RNF40O75150 1001 aa16.25■□□□□ 0.19
XRCC3-211ENST00000555055 CYP2J2P51589 502 aa16.25■□□□□ 0.19
XRCC3-211ENST00000555055 PPP2R5CQ13362 524 aa16.25■□□□□ 0.19
XRCC3-211ENST00000555055 MXRA8Q9BRK3 442 aa16.25■□□□□ 0.19
XRCC3-211ENST00000555055 PACSIN1Q9BY11 444 aa16.25■□□□□ 0.19
XRCC3-211ENST00000555055 GEMIN8Q9NWZ8 242 aaKnown RBP16.25■□□□□ 0.19
XRCC3-211ENST00000555055 ARMCX3Q9UH62 379 aaPredicted RBP16.25■□□□□ 0.19
XRCC3-211ENST00000555055 SYF2O95926 243 aaKnown RBP16.25■□□□□ 0.19
XRCC3-211ENST00000555055 VAV2P52735 878 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms