RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 PCDHA2Q9Y5H9 948 aa13.89□□□□□ -0.19
SYNE2-214ENST00000554928 SLITRK3O94933 977 aa13.88□□□□□ -0.19
SYNE2-214ENST00000554928 BAG4O95429 457 aaKnown RBP13.88□□□□□ -0.19
SYNE2-214ENST00000554928 FGBP02675 491 aa13.88□□□□□ -0.19
SYNE2-214ENST00000554928 CXCL10P02778 98 aa13.88□□□□□ -0.19
SYNE2-214ENST00000554928 TECP42680 631 aa13.88□□□□□ -0.19
SYNE2-214ENST00000554928 TRAPPC10P48553 1259 aa13.88□□□□□ -0.19
SYNE2-214ENST00000554928 CLCN3P51790 818 aa13.88□□□□□ -0.19
SYNE2-214ENST00000554928 NPEPPSP55786 919 aa13.88□□□□□ -0.19
SYNE2-214ENST00000554928 DRP2Q13474 957 aa13.88□□□□□ -0.19
SYNE2-214ENST00000554928 TARBP2Q15633 366 aaKnown RBP13.88□□□□□ -0.19
SYNE2-214ENST00000554928 MTERF2Q49AM1 385 aa13.88□□□□□ -0.19
SYNE2-214ENST00000554928 FAM26DQ5JW98 314 aa13.88□□□□□ -0.19
SYNE2-214ENST00000554928 PSRC1Q6PGN9 363 aaPredicted RBP13.88□□□□□ -0.19
SYNE2-214ENST00000554928 ANO5Q75V66 913 aa13.88□□□□□ -0.19
SYNE2-214ENST00000554928 KIAA0319LQ8IZA0 1049 aa13.88□□□□□ -0.19
SYNE2-214ENST00000554928 LRRC71Q8N4P6 559 aa13.88□□□□□ -0.19
SYNE2-214ENST00000554928 LINC01465Q8N7H1 131 aa13.88□□□□□ -0.19
SYNE2-214ENST00000554928 HERVK_113Q902F9 699 aa13.88□□□□□ -0.19
SYNE2-214ENST00000554928 EIF2AK1Q9BQI3 630 aaKnown RBP13.88□□□□□ -0.19
SYNE2-214ENST00000554928 LXNQ9BS40 222 aa13.88□□□□□ -0.19
SYNE2-214ENST00000554928 FTOQ9C0B1 505 aaKnown RBP eCLIP13.88□□□□□ -0.19
SYNE2-214ENST00000554928 CDHR5Q9HBB8 845 aa13.88□□□□□ -0.19
SYNE2-214ENST00000554928 SEPT9Q9UHD8 586 aaPredicted RBP13.88□□□□□ -0.19
SYNE2-214ENST00000554928 MTMR6Q9Y217 621 aa13.88□□□□□ -0.19
SYNE2-214ENST00000554928 COL1A2P08123 1366 aa13.87□□□□□ -0.19
SYNE2-214ENST00000554928 DDX11L8A8MPP1 907 aa13.87□□□□□ -0.19
SYNE2-214ENST00000554928 P4HBP07237 508 aaKnown RBP13.87□□□□□ -0.19
SYNE2-214ENST00000554928 RFC2P35250 354 aa13.87□□□□□ -0.19
SYNE2-214ENST00000554928 QARSP47897 775 aaKnown RBP13.87□□□□□ -0.19
SYNE2-214ENST00000554928 PSMC5P62195 406 aa13.87□□□□□ -0.19
SYNE2-214ENST00000554928 RESTQ13127 1097 aa13.87□□□□□ -0.19
SYNE2-214ENST00000554928 PTGDRQ13258 359 aa13.87□□□□□ -0.19
SYNE2-214ENST00000554928 LRIT3Q3SXY7 679 aa13.87□□□□□ -0.19
SYNE2-214ENST00000554928 TAF2Q6P1X5 1199 aa13.87□□□□□ -0.19
SYNE2-214ENST00000554928 TMCO2Q7Z6W1 182 aaPredicted RBP13.87□□□□□ -0.19
SYNE2-214ENST00000554928 RPAINQ86UA6 219 aa13.87□□□□□ -0.19
SYNE2-214ENST00000554928 ZNF668Q96K58 619 aaPredicted RBP13.87□□□□□ -0.19
SYNE2-214ENST00000554928 FAM167AQ96KS9 214 aa13.87□□□□□ -0.19
SYNE2-214ENST00000554928 HSD17B14Q9BPX1 270 aa13.87□□□□□ -0.19
SYNE2-214ENST00000554928 CDY2AQ9Y6F7 541 aa13.87□□□□□ -0.19
SYNE2-214ENST00000554928 SZT2Q5T011 3432 aa13.87□□□□□ -0.19
SYNE2-214ENST00000554928 SMIM35A0A1B0GVV1 85 aa13.86□□□□□ -0.19
SYNE2-214ENST00000554928 PP2D1A8MPX8 630 aa13.86□□□□□ -0.19
SYNE2-214ENST00000554928 MED24O75448 989 aa13.86□□□□□ -0.19
SYNE2-214ENST00000554928 VTNP04004 478 aa13.86□□□□□ -0.19
SYNE2-214ENST00000554928 SPATA31C1P0DKV0 1188 aa13.86□□□□□ -0.19
SYNE2-214ENST00000554928 GHRP10912 638 aa13.86□□□□□ -0.19
SYNE2-214ENST00000554928 PBX2P40425 430 aa13.86□□□□□ -0.19
SYNE2-214ENST00000554928 MRPS6P82932 125 aaKnown RBP13.86□□□□□ -0.19
SYNE2-214ENST00000554928 LPIN1Q14693 890 aa13.86□□□□□ -0.19
SYNE2-214ENST00000554928 ECM1Q16610 540 aa13.86□□□□□ -0.19
SYNE2-214ENST00000554928 XKR3Q5GH77 459 aa13.86□□□□□ -0.19
SYNE2-214ENST00000554928 TPH2Q8IWU9 490 aa13.86□□□□□ -0.19
SYNE2-214ENST00000554928 RPUSD2Q8IZ73 545 aaKnown RBP13.86□□□□□ -0.19
SYNE2-214ENST00000554928 DBF4BQ8NFT6 615 aa13.86□□□□□ -0.19
SYNE2-214ENST00000554928 NIFKQ9BYG3 293 aaKnown RBP13.86□□□□□ -0.19
SYNE2-214ENST00000554928 AGO3Q9H9G7 860 aaKnown RBP13.86□□□□□ -0.19
SYNE2-214ENST00000554928 NRBP2Q9NSY0 501 aa13.86□□□□□ -0.19
SYNE2-214ENST00000554928 BMP2KQ9NSY1 1161 aaPredicted RBP13.86□□□□□ -0.19
SYNE2-214ENST00000554928 WDR81Q562E7 1941 aa13.86□□□□□ -0.19
SYNE2-214ENST00000554928 SIP14410 1827 aa13.85□□□□□ -0.19
SYNE2-214ENST00000554928 ZBBXA8MT70 800 aa13.85□□□□□ -0.19
SYNE2-214ENST00000554928 CAND2O75155 1236 aa13.85□□□□□ -0.19
SYNE2-214ENST00000554928 ORC2Q13416 577 aaPredicted RBP13.85□□□□□ -0.19
SYNE2-214ENST00000554928 PKP1Q13835 747 aa13.85□□□□□ -0.19
SYNE2-214ENST00000554928 PLEKHG4Q58EX7 1191 aa13.85□□□□□ -0.19
SYNE2-214ENST00000554928 FBXO47Q5MNV8 452 aa13.85□□□□□ -0.19
SYNE2-214ENST00000554928 FOXD4L5Q5VV16 416 aaPredicted RBP13.85□□□□□ -0.19
SYNE2-214ENST00000554928 EFCAB12Q6NXP0 572 aa13.85□□□□□ -0.19
SYNE2-214ENST00000554928 C4orf19Q8IY42 314 aa13.85□□□□□ -0.19
SYNE2-214ENST00000554928 METTL13Q8N6R0 699 aa13.85□□□□□ -0.19
SYNE2-214ENST00000554928 TMEM40Q8WWA1 233 aa13.85□□□□□ -0.19
SYNE2-214ENST00000554928 FOXD4L4Q8WXT5 416 aaPredicted RBP13.85□□□□□ -0.19
SYNE2-214ENST00000554928 STX6O43752 255 aa13.84□□□□□ -0.19
SYNE2-214ENST00000554928 PFKMP08237 780 aa13.84□□□□□ -0.19
SYNE2-214ENST00000554928 CDC25AP30304 524 aa13.84□□□□□ -0.19
SYNE2-214ENST00000554928 YWHABP31946 246 aaKnown RBP13.84□□□□□ -0.19
SYNE2-214ENST00000554928 RABGGTBP53611 331 aa13.84□□□□□ -0.19
SYNE2-214ENST00000554928 DEFB103AP81534 67 aa13.84□□□□□ -0.19
SYNE2-214ENST00000554928 ATP2C1P98194 919 aaPredicted RBP13.84□□□□□ -0.19
SYNE2-214ENST00000554928 GRIN1Q05586 938 aa13.84□□□□□ -0.19
SYNE2-214ENST00000554928 TMEM266Q2M3C6 531 aa13.84□□□□□ -0.19
SYNE2-214ENST00000554928 RILPL1Q5EBL4 403 aa13.84□□□□□ -0.19
SYNE2-214ENST00000554928 CNKSR3Q6P9H4 555 aa13.84□□□□□ -0.19
SYNE2-214ENST00000554928 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.84□□□□□ -0.19
SYNE2-214ENST00000554928 CATSPER3Q86XQ3 398 aa13.84□□□□□ -0.19
SYNE2-214ENST00000554928 PIGOQ8TEQ8 1089 aa13.84□□□□□ -0.19
SYNE2-214ENST00000554928 TNPO1Q92973 898 aaKnown RBP13.84□□□□□ -0.19
SYNE2-214ENST00000554928 ZSWIM4Q9H7M6 989 aa13.84□□□□□ -0.19
SYNE2-214ENST00000554928 SUGCTQ9HAC7 445 aa13.84□□□□□ -0.19
SYNE2-214ENST00000554928 CYP26B1Q9NR63 512 aa13.84□□□□□ -0.19
SYNE2-214ENST00000554928 GINS2Q9Y248 185 aa13.84□□□□□ -0.19
SYNE2-214ENST00000554928 TRPV2Q9Y5S1 764 aa13.84□□□□□ -0.19
SYNE2-214ENST00000554928 CLIC4Q9Y696 253 aa13.84□□□□□ -0.19
SYNE2-214ENST00000554928 IGKV6-21A0A0C4DH24 114 aa13.83□□□□□ -0.2
SYNE2-214ENST00000554928 GPR32O75388 356 aa13.83□□□□□ -0.2
SYNE2-214ENST00000554928 MYOGP15173 224 aa13.83□□□□□ -0.2
SYNE2-214ENST00000554928 PDCP20941 246 aa13.83□□□□□ -0.2
SYNE2-214ENST00000554928 CD52P31358 61 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms