RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 PRPF40AO75400 957 aaKnown RBP18.33■□□□□ 0.53
SPTLC2-203ENST00000554901 RFC5P40937 340 aa18.33■□□□□ 0.53
SPTLC2-203ENST00000554901 STAT6P42226 847 aa18.33■□□□□ 0.53
SPTLC2-203ENST00000554901 CDK7P50613 346 aa18.33■□□□□ 0.53
SPTLC2-203ENST00000554901 ADAM17P78536 824 aa18.33■□□□□ 0.53
SPTLC2-203ENST00000554901 GRIK4Q16099 956 aa18.33■□□□□ 0.53
SPTLC2-203ENST00000554901 XKR9Q5GH70 373 aa18.33■□□□□ 0.53
SPTLC2-203ENST00000554901 SLC39A5Q6ZMH5 540 aa18.33■□□□□ 0.53
SPTLC2-203ENST00000554901 PIGOQ8TEQ8 1089 aa18.33■□□□□ 0.53
SPTLC2-203ENST00000554901 DIS3LQ8TF46 1054 aaKnown RBP18.33■□□□□ 0.53
SPTLC2-203ENST00000554901 CEP170P1Q96L14 293 aa18.33■□□□□ 0.53
SPTLC2-203ENST00000554901 JPH2Q9BR39 696 aaPredicted RBP18.33■□□□□ 0.53
SPTLC2-203ENST00000554901 MAGEF1Q9HAY2 307 aa18.33■□□□□ 0.53
SPTLC2-203ENST00000554901 KCND2Q9NZV8 630 aa18.33■□□□□ 0.53
SPTLC2-203ENST00000554901 HDAC6Q9UBN7 1215 aa18.33■□□□□ 0.53
SPTLC2-203ENST00000554901 A0A1B0GVL5 298 aa18.33■□□□□ 0.52
SPTLC2-203ENST00000554901 C17orf102A2RUQ5 167 aa18.33■□□□□ 0.52
SPTLC2-203ENST00000554901 MBLAC1A4D2B0 266 aaPredicted RBP18.33■□□□□ 0.52
SPTLC2-203ENST00000554901 ZBTB42B2RXF5 422 aa18.33■□□□□ 0.52
SPTLC2-203ENST00000554901 MAGEB2O15479 319 aa18.33■□□□□ 0.52
SPTLC2-203ENST00000554901 POLR2DO15514 142 aaKnown RBP18.33■□□□□ 0.52
SPTLC2-203ENST00000554901 SYKP43405 635 aa18.33■□□□□ 0.52
SPTLC2-203ENST00000554901 CHMP4BP1P59074 171 aa18.33■□□□□ 0.52
SPTLC2-203ENST00000554901 E2F4Q16254 413 aa18.33■□□□□ 0.52
SPTLC2-203ENST00000554901 SYT2Q8N9I0 419 aaPredicted RBP18.33■□□□□ 0.52
SPTLC2-203ENST00000554901 LMBR1Q8WVP7 490 aa18.33■□□□□ 0.52
SPTLC2-203ENST00000554901 LARP4BQ92615 738 aaKnown RBP18.33■□□□□ 0.52
SPTLC2-203ENST00000554901 RAD54LQ92698 747 aa18.33■□□□□ 0.52
SPTLC2-203ENST00000554901 CEP89Q96ST8 783 aa18.33■□□□□ 0.52
SPTLC2-203ENST00000554901 BHMT2Q9H2M3 363 aa18.33■□□□□ 0.52
SPTLC2-203ENST00000554901 LOXHD1Q8IVV2 1947 aa18.32■□□□□ 0.52
SPTLC2-203ENST00000554901 A0A087X0B3 334 aa18.32■□□□□ 0.52
SPTLC2-203ENST00000554901 ARHGEF35A5YM69 484 aa18.32■□□□□ 0.52
SPTLC2-203ENST00000554901 CCDC85CA6NKD9 419 aa18.32■□□□□ 0.52
SPTLC2-203ENST00000554901 E9PMD0 336 aa18.32■□□□□ 0.52
SPTLC2-203ENST00000554901 GAS2O43903 313 aaKnown RBP18.32■□□□□ 0.52
SPTLC2-203ENST00000554901 DGAT1O75907 488 aa18.32■□□□□ 0.52
SPTLC2-203ENST00000554901 RPLP2P05387 115 aaKnown RBP18.32■□□□□ 0.52
SPTLC2-203ENST00000554901 NDUFA8P51970 172 aa18.32■□□□□ 0.52
SPTLC2-203ENST00000554901 FAM160A1Q05DH4 1040 aa18.32■□□□□ 0.52
SPTLC2-203ENST00000554901 TBC1D8BQ0IIM8 1120 aa18.32■□□□□ 0.52
SPTLC2-203ENST00000554901 NAALADL2Q58DX5 795 aa18.32■□□□□ 0.52
SPTLC2-203ENST00000554901 FAM47CQ5HY64 1035 aa18.32■□□□□ 0.52
SPTLC2-203ENST00000554901 TRMT1LQ7Z2T5 733 aaKnown RBP18.32■□□□□ 0.52
SPTLC2-203ENST00000554901 ANKRD33Q7Z3H0 272 aa18.32■□□□□ 0.52
SPTLC2-203ENST00000554901 KCNK18Q7Z418 384 aa18.32■□□□□ 0.52
SPTLC2-203ENST00000554901 PDILTQ8N807 584 aa18.32■□□□□ 0.52
SPTLC2-203ENST00000554901 TOX2Q96NM4 488 aa18.32■□□□□ 0.52
SPTLC2-203ENST00000554901 PLIN2Q99541 437 aa18.32■□□□□ 0.52
SPTLC2-203ENST00000554901 LMBRD1Q9NUN5 540 aa18.32■□□□□ 0.52
SPTLC2-203ENST00000554901 BLOC1S4Q9NUP1 217 aa18.32■□□□□ 0.52
SPTLC2-203ENST00000554901 SETD4Q9NVD3 440 aa18.32■□□□□ 0.52
SPTLC2-203ENST00000554901 ZBTB39O15060 712 aa18.31■□□□□ 0.52
SPTLC2-203ENST00000554901 GADD45BO75293 160 aaPredicted RBP18.31■□□□□ 0.52
SPTLC2-203ENST00000554901 MAFO75444 373 aaPredicted RBP18.31■□□□□ 0.52
SPTLC2-203ENST00000554901 PLA2G4BP0C869 781 aa18.31■□□□□ 0.52
SPTLC2-203ENST00000554901 NPEPPSP55786 919 aa18.31■□□□□ 0.52
SPTLC2-203ENST00000554901 MTERF2Q49AM1 385 aa18.31■□□□□ 0.52
SPTLC2-203ENST00000554901 PLA2G4FQ68DD2 849 aa18.31■□□□□ 0.52
SPTLC2-203ENST00000554901 RETREG2Q8NC44 543 aa18.31■□□□□ 0.52
SPTLC2-203ENST00000554901 SLC7A3Q8WY07 619 aa18.31■□□□□ 0.52
SPTLC2-203ENST00000554901 CCDC34Q96HJ3 373 aa18.31■□□□□ 0.52
SPTLC2-203ENST00000554901 TIPINQ9BVW5 301 aa18.31■□□□□ 0.52
SPTLC2-203ENST00000554901 LRRC27Q9C0I9 530 aa18.31■□□□□ 0.52
SPTLC2-203ENST00000554901 DHX33Q9H6R0 707 aaKnown RBP18.31■□□□□ 0.52
SPTLC2-203ENST00000554901 TUBE1Q9UJT0 475 aa18.31■□□□□ 0.52
SPTLC2-203ENST00000554901 IGKV6-21A0A0C4DH24 114 aa18.3■□□□□ 0.52
SPTLC2-203ENST00000554901 TMEM150BA6NC51 233 aa18.3■□□□□ 0.52
SPTLC2-203ENST00000554901 C22orf31O95567 290 aa18.3■□□□□ 0.52
SPTLC2-203ENST00000554901 SLFN14P0C7P3 912 aa18.3■□□□□ 0.52
SPTLC2-203ENST00000554901 PTMSP20962 102 aa18.3■□□□□ 0.52
SPTLC2-203ENST00000554901 SLC12A3P55017 1021 aa18.3■□□□□ 0.52
SPTLC2-203ENST00000554901 MARCH8Q5T0T0 291 aa18.3■□□□□ 0.52
SPTLC2-203ENST00000554901 TAF2Q6P1X5 1199 aa18.3■□□□□ 0.52
SPTLC2-203ENST00000554901 SV2BQ7L1I2 683 aa18.3■□□□□ 0.52
SPTLC2-203ENST00000554901 CEP57L1Q8IYX8 460 aa18.3■□□□□ 0.52
SPTLC2-203ENST00000554901 FMR1NBQ8N0W7 255 aaPredicted RBP18.3■□□□□ 0.52
SPTLC2-203ENST00000554901 DHX58Q96C10 678 aa18.3■□□□□ 0.52
SPTLC2-203ENST00000554901 PANK2Q9BZ23 570 aa18.3■□□□□ 0.52
SPTLC2-203ENST00000554901 TNMDQ9H2S6 317 aa18.3■□□□□ 0.52
SPTLC2-203ENST00000554901 GOLPH3LQ9H4A5 285 aa18.3■□□□□ 0.52
SPTLC2-203ENST00000554901 PCDHA2Q9Y5H9 948 aa18.3■□□□□ 0.52
SPTLC2-203ENST00000554901 KLRC1P26715 233 aa18.29■□□□□ 0.52
SPTLC2-203ENST00000554901 MCM4P33991 863 aa18.29■□□□□ 0.52
SPTLC2-203ENST00000554901 POLGP54098 1239 aaPredicted RBP18.29■□□□□ 0.52
SPTLC2-203ENST00000554901 IGBP1P78318 339 aa18.29■□□□□ 0.52
SPTLC2-203ENST00000554901 AMPD3Q01432 767 aa18.29■□□□□ 0.52
SPTLC2-203ENST00000554901 GDF6Q6KF10 455 aaPredicted RBP18.29■□□□□ 0.52
SPTLC2-203ENST00000554901 PADI6Q6TGC4 694 aa18.29■□□□□ 0.52
SPTLC2-203ENST00000554901 MTHFD1LQ6UB35 978 aa18.29■□□□□ 0.52
SPTLC2-203ENST00000554901 FAM126BQ8IXS8 530 aa18.29■□□□□ 0.52
SPTLC2-203ENST00000554901 MCPH1Q8NEM0 835 aa18.29■□□□□ 0.52
SPTLC2-203ENST00000554901 ENGASEQ8NFI3 743 aa18.29■□□□□ 0.52
SPTLC2-203ENST00000554901 LRRC15Q8TF66 581 aa18.29■□□□□ 0.52
SPTLC2-203ENST00000554901 TIGD1Q96MW7 591 aa18.29■□□□□ 0.52
SPTLC2-203ENST00000554901 KBTBD4Q9NVX7 518 aa18.29■□□□□ 0.52
SPTLC2-203ENST00000554901 SMIM35A0A1B0GVV1 85 aa18.28■□□□□ 0.52
SPTLC2-203ENST00000554901 TLR3O15455 904 aaKnown RBP18.28■□□□□ 0.52
SPTLC2-203ENST00000554901 ZNF202O95125 648 aa18.28■□□□□ 0.52
SPTLC2-203ENST00000554901 CYP11B2P19099 503 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms