RNA–Protein interactions for RNA: ENST00000554844.1

TMEM253-204, Transcript of transmembrane protein 253, humanhuman

TSL 4

Gene TMEM253, Length 591 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-204ENST00000554844 ZNF76P36508 570 aa11.02□□□□□ -0.65
TMEM253-204ENST00000554844 NAPAP54920 295 aa11.02□□□□□ -0.65
TMEM253-204ENST00000554844 ANTXR2P58335 489 aa11.02□□□□□ -0.65
TMEM253-204ENST00000554844 ACTR2P61160 394 aa11.02□□□□□ -0.65
TMEM253-204ENST00000554844 PLCB4Q15147 1175 aa11.02□□□□□ -0.65
TMEM253-204ENST00000554844 PLPPR4Q7Z2D5 763 aa11.02□□□□□ -0.65
TMEM253-204ENST00000554844 CCDC82Q8N4S0 544 aa11.02□□□□□ -0.65
TMEM253-204ENST00000554844 SRBD1Q8N5C6 995 aaKnown RBP11.02□□□□□ -0.65
TMEM253-204ENST00000554844 EXOC6Q8TAG9 804 aa11.02□□□□□ -0.65
TMEM253-204ENST00000554844 MXRA8Q9BRK3 442 aa11.02□□□□□ -0.65
TMEM253-204ENST00000554844 PUF60Q9UHX1 559 aaKnown RBP11.02□□□□□ -0.65
TMEM253-204ENST00000554844 RBM8AQ9Y5S9 174 aaKnown RBP11.02□□□□□ -0.65
TMEM253-204ENST00000554844 NFASCO94856 1347 aa11.02□□□□□ -0.65
TMEM253-204ENST00000554844 KDM3AQ9Y4C1 1321 aa11.02□□□□□ -0.65
TMEM253-204ENST00000554844 KIAA1671Q9BY89 1806 aa11.02□□□□□ -0.65
TMEM253-204ENST00000554844 LOC730098B7Z3J9 87 aa11.01□□□□□ -0.65
TMEM253-204ENST00000554844 SH2B2O14492 632 aaPredicted RBP11.01□□□□□ -0.65
TMEM253-204ENST00000554844 SGSM2O43147 1006 aa11.01□□□□□ -0.65
TMEM253-204ENST00000554844 HBP1O60381 514 aa11.01□□□□□ -0.65
TMEM253-204ENST00000554844 FOSP01100 380 aaPredicted RBP11.01□□□□□ -0.65
TMEM253-204ENST00000554844 ATF7P17544 494 aaPredicted RBP11.01□□□□□ -0.65
TMEM253-204ENST00000554844 LAG3P18627 525 aa11.01□□□□□ -0.65
TMEM253-204ENST00000554844 RXRAP19793 462 aa11.01□□□□□ -0.65
TMEM253-204ENST00000554844 SIGLEC14Q08ET2 396 aa11.01□□□□□ -0.65
TMEM253-204ENST00000554844 CAMK1Q14012 370 aa11.01□□□□□ -0.65
TMEM253-204ENST00000554844 TMEM266Q2M3C6 531 aa11.01□□□□□ -0.65
TMEM253-204ENST00000554844 MTHFD1LQ6UB35 978 aa11.01□□□□□ -0.65
TMEM253-204ENST00000554844 RTN4RL1Q86UN2 441 aaPredicted RBP11.01□□□□□ -0.65
TMEM253-204ENST00000554844 CKAP2LQ8IYA6 745 aa11.01□□□□□ -0.65
TMEM253-204ENST00000554844 CMTR1Q8N1G2 835 aaKnown RBP11.01□□□□□ -0.65
TMEM253-204ENST00000554844 FBXL6Q8N531 539 aa11.01□□□□□ -0.65
TMEM253-204ENST00000554844 TRAPPC12Q8WVT3 735 aa11.01□□□□□ -0.65
TMEM253-204ENST00000554844 ZBTB10Q96DT7 871 aa11.01□□□□□ -0.65
TMEM253-204ENST00000554844 GLT8D2Q9H1C3 349 aa11.01□□□□□ -0.65
TMEM253-204ENST00000554844 ATP6V0A4Q9HBG4 840 aa11.01□□□□□ -0.65
TMEM253-204ENST00000554844 ENTPD7Q9NQZ7 604 aa11.01□□□□□ -0.65
TMEM253-204ENST00000554844 KCNH7Q9NS40 1196 aa11.01□□□□□ -0.65
TMEM253-204ENST00000554844 TMEM260Q9NX78 707 aa11.01□□□□□ -0.65
TMEM253-204ENST00000554844 CLEC1BQ9P126 229 aa11.01□□□□□ -0.65
TMEM253-204ENST00000554844 TECTAO75443 2155 aa11□□□□□ -0.65
TMEM253-204ENST00000554844 hCG_1642624A0A1W2PR95 340 aa11□□□□□ -0.65
TMEM253-204ENST00000554844 DDX39AO00148 427 aaKnown RBP11□□□□□ -0.65
TMEM253-204ENST00000554844 PER2O15055 1255 aa11□□□□□ -0.65
TMEM253-204ENST00000554844 HOXA2O43364 376 aa11□□□□□ -0.65
TMEM253-204ENST00000554844 ST18O60284 1047 aa11□□□□□ -0.65
TMEM253-204ENST00000554844 FGF18O76093 207 aa11□□□□□ -0.65
TMEM253-204ENST00000554844 KLRC1P26715 233 aa11□□□□□ -0.65
TMEM253-204ENST00000554844 GATMP50440 423 aa11□□□□□ -0.65
TMEM253-204ENST00000554844 ADCY7P51828 1080 aa11□□□□□ -0.65
TMEM253-204ENST00000554844 BMS1Q14692 1282 aaKnown RBP11□□□□□ -0.65
TMEM253-204ENST00000554844 CBX2Q14781 532 aaPredicted RBP11□□□□□ -0.65
TMEM253-204ENST00000554844 PLPP4Q5VZY2 271 aa11□□□□□ -0.65
TMEM253-204ENST00000554844 PPP1R18Q6NYC8 613 aa11□□□□□ -0.65
TMEM253-204ENST00000554844 MIS18BP1Q6P0N0 1132 aa11□□□□□ -0.65
TMEM253-204ENST00000554844 SLC24A5Q71RS6 500 aa11□□□□□ -0.65
TMEM253-204ENST00000554844 MICU3Q86XE3 530 aa11□□□□□ -0.65
TMEM253-204ENST00000554844 TEX2Q8IWB9 1127 aa11□□□□□ -0.65
TMEM253-204ENST00000554844 ABI1Q8IZP0 508 aa11□□□□□ -0.65
TMEM253-204ENST00000554844 COLGALT1Q8NBJ5 622 aa11□□□□□ -0.65
TMEM253-204ENST00000554844 PRSS33Q8NF86 280 aa11□□□□□ -0.65
TMEM253-204ENST00000554844 MAP4K1Q92918 833 aa11□□□□□ -0.65
TMEM253-204ENST00000554844 PCYT2Q99447 389 aa11□□□□□ -0.65
TMEM253-204ENST00000554844 ADAM2Q99965 735 aa11□□□□□ -0.65
TMEM253-204ENST00000554844 RBM28Q9NW13 759 aaKnown RBP11□□□□□ -0.65
TMEM253-204ENST00000554844 TAF6LQ9Y6J9 622 aa11□□□□□ -0.65
TMEM253-204ENST00000554844 COL1A2P08123 1366 aa11□□□□□ -0.65
TMEM253-204ENST00000554844 LOXHD1Q8IVV2 1947 aa10.99□□□□□ -0.65
TMEM253-204ENST00000554844 GLP2RO95838 553 aa10.99□□□□□ -0.65
TMEM253-204ENST00000554844 CA8P35219 290 aa10.99□□□□□ -0.65
TMEM253-204ENST00000554844 PPM1AP35813 382 aa10.99□□□□□ -0.65
TMEM253-204ENST00000554844 TECP42680 631 aa10.99□□□□□ -0.65
TMEM253-204ENST00000554844 LIFRP42702 1097 aa10.99□□□□□ -0.65
TMEM253-204ENST00000554844 KRT17Q04695 432 aa10.99□□□□□ -0.65
TMEM253-204ENST00000554844 AP3B2Q13367 1082 aa10.99□□□□□ -0.65
TMEM253-204ENST00000554844 DUSP6Q16828 381 aa10.99□□□□□ -0.65
TMEM253-204ENST00000554844 CEP55Q53EZ4 464 aa10.99□□□□□ -0.65
TMEM253-204ENST00000554844 ZNF484Q5JVG2 852 aa10.99□□□□□ -0.65
TMEM253-204ENST00000554844 PDXDC2PQ6P474 469 aa10.99□□□□□ -0.65
TMEM253-204ENST00000554844 TMTC3Q6ZXV5 915 aa10.99□□□□□ -0.65
TMEM253-204ENST00000554844 RAB11FIP4Q86YS3 637 aa10.99□□□□□ -0.65
TMEM253-204ENST00000554844 FANCBQ8NB91 859 aa10.99□□□□□ -0.65
TMEM253-204ENST00000554844 TMEM87AQ8NBN3 555 aa10.99□□□□□ -0.65
TMEM253-204ENST00000554844 ATP8B4Q8TF62 1192 aa10.99□□□□□ -0.65
TMEM253-204ENST00000554844 ANO3Q9BYT9 981 aa10.99□□□□□ -0.65
TMEM253-204ENST00000554844 AGO4Q9HCK5 861 aaKnown RBP10.99□□□□□ -0.65
TMEM253-204ENST00000554844 ERVK-5Q9HDB9 667 aa10.99□□□□□ -0.65
TMEM253-204ENST00000554844 ZNF302Q9NR11 478 aa10.99□□□□□ -0.65
TMEM253-204ENST00000554844 RGS18Q9NS28 235 aa10.99□□□□□ -0.65
TMEM253-204ENST00000554844 ST3GAL5Q9UNP4 418 aa10.99□□□□□ -0.65
TMEM253-204ENST00000554844 LZTS1Q9Y250 596 aa10.99□□□□□ -0.65
TMEM253-204ENST00000554844 NR2E1Q9Y466 385 aa10.99□□□□□ -0.65
TMEM253-204ENST00000554844 PCDHGC5Q9Y5F6 944 aa10.99□□□□□ -0.65
TMEM253-204ENST00000554844 PLXNA4Q9HCM2 1894 aa10.98□□□□□ -0.65
TMEM253-204ENST00000554844 hCG_1984214I3L0E3 225 aa10.98□□□□□ -0.65
TMEM253-204ENST00000554844 ZSCAN20P17040 1043 aaPredicted RBP10.98□□□□□ -0.65
TMEM253-204ENST00000554844 PDE4AP27815 886 aa10.98□□□□□ -0.65
TMEM253-204ENST00000554844 CRYBB1P53674 252 aaPredicted RBP10.98□□□□□ -0.65
TMEM253-204ENST00000554844 PTPN21Q16825 1174 aa10.98□□□□□ -0.65
TMEM253-204ENST00000554844 TPRNQ4KMQ1 711 aa10.98□□□□□ -0.65
TMEM253-204ENST00000554844 WWC2Q6AWC2 1192 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms