RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 DHCR24Q15392 516 aa5.7□□□□□ -1.5
SCFD1-214ENST00000554819 SEPT7Q16181 437 aaKnown RBP5.7□□□□□ -1.5
SCFD1-214ENST00000554819 Q6ZUG5 572 aa5.7□□□□□ -1.5
SCFD1-214ENST00000554819 RTN4RL1Q86UN2 441 aaPredicted RBP5.7□□□□□ -1.5
SCFD1-214ENST00000554819 C11orf74Q86VG3 221 aa5.7□□□□□ -1.5
SCFD1-214ENST00000554819 THNSL2Q86YJ6 484 aa5.7□□□□□ -1.5
SCFD1-214ENST00000554819 REXO1L1PQ8IX06 675 aa5.7□□□□□ -1.5
SCFD1-214ENST00000554819 SMC1BQ8NDV3 1235 aa5.7□□□□□ -1.5
SCFD1-214ENST00000554819 NUDT10Q8NFP7 164 aa5.7□□□□□ -1.5
SCFD1-214ENST00000554819 CHTF18Q8WVB6 975 aa5.7□□□□□ -1.5
SCFD1-214ENST00000554819 NUDT11Q96G61 164 aa5.7□□□□□ -1.5
SCFD1-214ENST00000554819 C16orf92Q96LL3 132 aa5.7□□□□□ -1.5
SCFD1-214ENST00000554819 FOXB1Q99853 325 aa5.7□□□□□ -1.5
SCFD1-214ENST00000554819 AMNQ9BXJ7 453 aa5.7□□□□□ -1.5
SCFD1-214ENST00000554819 TOMM22Q9NS69 142 aa5.7□□□□□ -1.5
SCFD1-214ENST00000554819 THG1LQ9NWX6 298 aaKnown RBP5.7□□□□□ -1.5
SCFD1-214ENST00000554819 ZDHHC9Q9Y397 364 aa5.7□□□□□ -1.5
SCFD1-214ENST00000554819 ADAMTS20P59510 1910 aa5.7□□□□□ -1.5
SCFD1-214ENST00000554819 UBA6A0AVT1 1052 aaPredicted RBP5.69□□□□□ -1.5
SCFD1-214ENST00000554819 HOXA5P20719 270 aa5.69□□□□□ -1.5
SCFD1-214ENST00000554819 PTX3P26022 381 aaPredicted RBP5.69□□□□□ -1.5
SCFD1-214ENST00000554819 APEX1P27695 318 aaKnown RBP5.69□□□□□ -1.5
SCFD1-214ENST00000554819 STAT3P40763 770 aa5.69□□□□□ -1.5
SCFD1-214ENST00000554819 LSSP48449 732 aa5.69□□□□□ -1.5
SCFD1-214ENST00000554819 IL2P60568 153 aa5.69□□□□□ -1.5
SCFD1-214ENST00000554819 ROM1Q03395 351 aa5.69□□□□□ -1.5
SCFD1-214ENST00000554819 SURF1Q15526 300 aa5.69□□□□□ -1.5
SCFD1-214ENST00000554819 TTC38Q5R3I4 469 aa5.69□□□□□ -1.5
SCFD1-214ENST00000554819 ZFYVE27Q5T4F4 411 aa5.69□□□□□ -1.5
SCFD1-214ENST00000554819 CREB3L3Q68CJ9 461 aa5.69□□□□□ -1.5
SCFD1-214ENST00000554819 PLEKHH3Q7Z736 793 aa5.69□□□□□ -1.5
SCFD1-214ENST00000554819 RNF180Q86T96 592 aa5.69□□□□□ -1.5
SCFD1-214ENST00000554819 IFNL2Q8IZJ0 200 aa5.69□□□□□ -1.5
SCFD1-214ENST00000554819 CHAC2Q8WUX2 184 aa5.69□□□□□ -1.5
SCFD1-214ENST00000554819 USP7Q93009 1102 aa5.69□□□□□ -1.5
SCFD1-214ENST00000554819 FOXRED1Q96CU9 486 aaPredicted RBP5.69□□□□□ -1.5
SCFD1-214ENST00000554819 AJUBAQ96IF1 538 aa5.69□□□□□ -1.5
SCFD1-214ENST00000554819 MAML3Q96JK9 1138 aa5.69□□□□□ -1.5
SCFD1-214ENST00000554819 TEPSINQ96N21 525 aa5.69□□□□□ -1.5
SCFD1-214ENST00000554819 ADAM29Q9UKF5 820 aa5.69□□□□□ -1.5
SCFD1-214ENST00000554819 MAFGO15525 162 aa5.68□□□□□ -1.5
SCFD1-214ENST00000554819 FKBP9O95302 570 aa5.68□□□□□ -1.5
SCFD1-214ENST00000554819 CD40P25942 277 aa5.68□□□□□ -1.5
SCFD1-214ENST00000554819 MAP3K12Q12852 859 aa5.68□□□□□ -1.5
SCFD1-214ENST00000554819 SKOR2Q2VWA4 1001 aaPredicted RBP5.68□□□□□ -1.5
SCFD1-214ENST00000554819 CT47A1Q5JQC4 288 aaPredicted RBP5.68□□□□□ -1.5
SCFD1-214ENST00000554819 TIGD7Q6NT04 549 aaPredicted RBP5.68□□□□□ -1.5
SCFD1-214ENST00000554819 LRSAM1Q6UWE0 723 aa5.68□□□□□ -1.5
SCFD1-214ENST00000554819 FKBP9P1Q75LS8 142 aa5.68□□□□□ -1.5
SCFD1-214ENST00000554819 PHYKPLQ8IUZ5 450 aa5.68□□□□□ -1.5
SCFD1-214ENST00000554819 GPR101Q96P66 508 aaPredicted RBP5.68□□□□□ -1.5
SCFD1-214ENST00000554819 TUBGCP5Q96RT8 1024 aa5.68□□□□□ -1.5
SCFD1-214ENST00000554819 CARD11Q9BXL7 1154 aa5.68□□□□□ -1.5
SCFD1-214ENST00000554819 KRTAP4-9Q9BYQ8 210 aa5.68□□□□□ -1.5
SCFD1-214ENST00000554819 KATNBL1Q9H079 304 aa5.68□□□□□ -1.5
SCFD1-214ENST00000554819 H2AFY2Q9P0M6 372 aaPredicted RBP5.68□□□□□ -1.5
SCFD1-214ENST00000554819 A0A0G2JNJ9 132 aa5.67□□□□□ -1.5
SCFD1-214ENST00000554819 ZEB2O60315 1214 aa5.67□□□□□ -1.5
SCFD1-214ENST00000554819 MAFO75444 373 aaPredicted RBP5.67□□□□□ -1.5
SCFD1-214ENST00000554819 PRLP01236 227 aa5.67□□□□□ -1.5
SCFD1-214ENST00000554819 CPEP16870 476 aa5.67□□□□□ -1.5
SCFD1-214ENST00000554819 LSP1P33241 339 aa5.67□□□□□ -1.5
SCFD1-214ENST00000554819 CTSWP56202 376 aa5.67□□□□□ -1.5
SCFD1-214ENST00000554819 CD83Q01151 205 aa5.67□□□□□ -1.5
SCFD1-214ENST00000554819 SLC6A3Q01959 620 aa5.67□□□□□ -1.5
SCFD1-214ENST00000554819 TOP3AQ13472 1001 aaPredicted RBP5.67□□□□□ -1.5
SCFD1-214ENST00000554819 LRRC32Q14392 662 aa5.67□□□□□ -1.5
SCFD1-214ENST00000554819 UBXN11Q5T124 520 aa5.67□□□□□ -1.5
SCFD1-214ENST00000554819 GPR158Q5T848 1215 aa5.67□□□□□ -1.5
SCFD1-214ENST00000554819 ERICH6BQ5W0A0 696 aa5.67□□□□□ -1.5
SCFD1-214ENST00000554819 KANK2Q63ZY3 851 aa5.67□□□□□ -1.5
SCFD1-214ENST00000554819 GRAMD4Q6IC98 578 aa5.67□□□□□ -1.5
SCFD1-214ENST00000554819 OTOP2Q7RTS6 562 aa5.67□□□□□ -1.5
SCFD1-214ENST00000554819 KRT26Q7Z3Y9 468 aa5.67□□□□□ -1.5
SCFD1-214ENST00000554819 KBTBD2Q8IY47 623 aa5.67□□□□□ -1.5
SCFD1-214ENST00000554819 MBD6Q96DN6 1003 aa5.67□□□□□ -1.5
SCFD1-214ENST00000554819 TTC1Q99614 292 aa5.67□□□□□ -1.5
SCFD1-214ENST00000554819 IFT22Q9H7X7 185 aa5.67□□□□□ -1.5
SCFD1-214ENST00000554819 SPTLC3Q9NUV7 552 aa5.67□□□□□ -1.5
SCFD1-214ENST00000554819 RTEL1Q9NZ71 1219 aa5.67□□□□□ -1.5
SCFD1-214ENST00000554819 Q9UFV3 132 aa5.67□□□□□ -1.5
SCFD1-214ENST00000554819 CNR2P34972 360 aa5.66□□□□□ -1.5
SCFD1-214ENST00000554819 ADCYAP1R1P41586 468 aa5.66□□□□□ -1.5
SCFD1-214ENST00000554819 ETV4P43268 484 aa5.66□□□□□ -1.5
SCFD1-214ENST00000554819 SMAD3P84022 425 aaKnown RBP5.66□□□□□ -1.5
SCFD1-214ENST00000554819 MOGSQ13724 837 aa5.66□□□□□ -1.5
SCFD1-214ENST00000554819 USP10Q14694 798 aaKnown RBP5.66□□□□□ -1.5
SCFD1-214ENST00000554819 NFIXQ14938 502 aa5.66□□□□□ -1.5
SCFD1-214ENST00000554819 RNF187Q5TA31 235 aaPredicted RBP5.66□□□□□ -1.5
SCFD1-214ENST00000554819 TMEM200BQ69YZ2 307 aa5.66□□□□□ -1.5
SCFD1-214ENST00000554819 SLFN12LQ6IEE8 588 aa5.66□□□□□ -1.5
SCFD1-214ENST00000554819 RALYLQ86SE5 291 aaKnown RBP5.66□□□□□ -1.5
SCFD1-214ENST00000554819 C7orf31Q8N865 590 aa5.66□□□□□ -1.5
SCFD1-214ENST00000554819 RPGRQ92834 1020 aaKnown RBP5.66□□□□□ -1.5
SCFD1-214ENST00000554819 ZDHHC5Q9C0B5 715 aa5.66□□□□□ -1.5
SCFD1-214ENST00000554819 USP36Q9P275 1121 aaKnown RBP5.66□□□□□ -1.5
SCFD1-214ENST00000554819 INVSQ9Y283 1065 aa5.66□□□□□ -1.5
SCFD1-214ENST00000554819 A0A0G2JLL6 359 aaPredicted RBP5.65□□□□□ -1.5
SCFD1-214ENST00000554819 TGM5O43548 720 aa5.65□□□□□ -1.5
SCFD1-214ENST00000554819 BRINP1O60477 761 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms