RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 NCAPHQ15003 741 aa6.63□□□□□ -1.35
ATXN3-230ENST00000554673 KARSQ15046 597 aaKnown RBP6.63□□□□□ -1.35
ATXN3-230ENST00000554673 CCDC144BQ3MJ40 725 aa6.63□□□□□ -1.35
ATXN3-230ENST00000554673 RILPL1Q5EBL4 403 aa6.63□□□□□ -1.35
ATXN3-230ENST00000554673 ATL3Q6DD88 541 aa6.63□□□□□ -1.35
ATXN3-230ENST00000554673 LRSAM1Q6UWE0 723 aa6.63□□□□□ -1.35
ATXN3-230ENST00000554673 LBX2Q6XYB7 198 aa6.63□□□□□ -1.35
ATXN3-230ENST00000554673 LOXHD1Q8IVV2 1947 aa6.63□□□□□ -1.35
ATXN3-230ENST00000554673 REXO1Q8N1G1 1221 aaKnown RBP6.63□□□□□ -1.35
ATXN3-230ENST00000554673 FAM43AQ8N2R8 423 aa6.63□□□□□ -1.35
ATXN3-230ENST00000554673 IGSF22Q8N9C0 903 aa6.63□□□□□ -1.35
ATXN3-230ENST00000554673 GLIS3Q8NEA6 775 aa6.63□□□□□ -1.35
ATXN3-230ENST00000554673 SPATA20Q8TB22 786 aa6.63□□□□□ -1.35
ATXN3-230ENST00000554673 MRPS27Q92552 414 aaKnown RBP6.63□□□□□ -1.35
ATXN3-230ENST00000554673 WASF1Q92558 559 aa6.63□□□□□ -1.35
ATXN3-230ENST00000554673 DCPSQ96C86 337 aaKnown RBP6.63□□□□□ -1.35
ATXN3-230ENST00000554673 OPTNQ96CV9 577 aa6.63□□□□□ -1.35
ATXN3-230ENST00000554673 HOOK2Q96ED9 719 aa6.63□□□□□ -1.35
ATXN3-230ENST00000554673 ZNF396Q96N95 335 aaPredicted RBP6.63□□□□□ -1.35
ATXN3-230ENST00000554673 SLF1Q9BQI6 1058 aa6.63□□□□□ -1.35
ATXN3-230ENST00000554673 AMNQ9BXJ7 453 aa6.63□□□□□ -1.35
ATXN3-230ENST00000554673 ACBD3Q9H3P7 528 aa6.63□□□□□ -1.35
ATXN3-230ENST00000554673 ZNF358Q9NW07 568 aa6.63□□□□□ -1.35
ATXN3-230ENST00000554673 TUBE1Q9UJT0 475 aa6.63□□□□□ -1.35
ATXN3-230ENST00000554673 FEM1BQ9UK73 627 aa6.63□□□□□ -1.35
ATXN3-230ENST00000554673 VWA3AA6NCI4 1184 aa6.62□□□□□ -1.35
ATXN3-230ENST00000554673 BTBD19C9JJ37 291 aa6.62□□□□□ -1.35
ATXN3-230ENST00000554673 IGF2BP3O00425 579 aaKnown RBP eCLIP6.62□□□□□ -1.35
ATXN3-230ENST00000554673 ZBTB39O15060 712 aa6.62□□□□□ -1.35
ATXN3-230ENST00000554673 MSH4O15457 936 aa6.62□□□□□ -1.35
ATXN3-230ENST00000554673 ATP9AO75110 1047 aa6.62□□□□□ -1.35
ATXN3-230ENST00000554673 FLOT1O75955 427 aa6.62□□□□□ -1.35
ATXN3-230ENST00000554673 STBD1O95210 358 aa6.62□□□□□ -1.35
ATXN3-230ENST00000554673 CYP3A4P08684 503 aa6.62□□□□□ -1.35
ATXN3-230ENST00000554673 HOXA7P31268 230 aaPredicted RBP6.62□□□□□ -1.35
ATXN3-230ENST00000554673 DEKP35659 375 aaKnown RBP6.62□□□□□ -1.35
ATXN3-230ENST00000554673 ME1P48163 572 aa6.62□□□□□ -1.35
ATXN3-230ENST00000554673 TRAPPC10P48553 1259 aa6.62□□□□□ -1.35
ATXN3-230ENST00000554673 RNF144AP50876 292 aaPredicted RBP6.62□□□□□ -1.35
ATXN3-230ENST00000554673 PSMC6P62333 389 aa6.62□□□□□ -1.35
ATXN3-230ENST00000554673 PLCB3Q01970 1234 aa6.62□□□□□ -1.35
ATXN3-230ENST00000554673 PPIL2Q13356 520 aa6.62□□□□□ -1.35
ATXN3-230ENST00000554673 NONOQ15233 471 aaKnown RBP eCLIP6.62□□□□□ -1.35
ATXN3-230ENST00000554673 LETM2Q2VYF4 491 aa6.62□□□□□ -1.35
ATXN3-230ENST00000554673 DPCR1Q3MIW9 517 aa6.62□□□□□ -1.35
ATXN3-230ENST00000554673 TMEM119Q4V9L6 283 aa6.62□□□□□ -1.35
ATXN3-230ENST00000554673 CCDC183Q5T5S1 534 aa6.62□□□□□ -1.35
ATXN3-230ENST00000554673 EGFLAMQ63HQ2 1017 aa6.62□□□□□ -1.35
ATXN3-230ENST00000554673 DCAF15Q66K64 600 aa6.62□□□□□ -1.35
ATXN3-230ENST00000554673 KRBA2Q6ZNG9 492 aa6.62□□□□□ -1.35
ATXN3-230ENST00000554673 KRT25Q7Z3Z0 450 aa6.62□□□□□ -1.35
ATXN3-230ENST00000554673 NEK8Q86SG6 692 aa6.62□□□□□ -1.35
ATXN3-230ENST00000554673 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.62□□□□□ -1.35
ATXN3-230ENST00000554673 LPAR1Q92633 364 aa6.62□□□□□ -1.35
ATXN3-230ENST00000554673 ASCC2Q9H1I8 757 aaPredicted RBP6.62□□□□□ -1.35
ATXN3-230ENST00000554673 PORCNQ9H237 461 aa6.62□□□□□ -1.35
ATXN3-230ENST00000554673 PIF1Q9H611 641 aa6.62□□□□□ -1.35
ATXN3-230ENST00000554673 PSTPIP2Q9H939 334 aa6.62□□□□□ -1.35
ATXN3-230ENST00000554673 GINM1Q9NU53 330 aa6.62□□□□□ -1.35
ATXN3-230ENST00000554673 EVPLQ92817 2033 aa6.62□□□□□ -1.35
ATXN3-230ENST00000554673 ANK1P16157 1881 aa6.62□□□□□ -1.35
ATXN3-230ENST00000554673 ABCB11O95342 1321 aa6.61□□□□□ -1.35
ATXN3-230ENST00000554673 DNAJC25-GNG10A0A024R161 153 aa6.61□□□□□ -1.35
ATXN3-230ENST00000554673 hCG_1984214I3L0E3 225 aa6.61□□□□□ -1.35
ATXN3-230ENST00000554673 ATP2A1O14983 1001 aa6.61□□□□□ -1.35
ATXN3-230ENST00000554673 ADCY6O43306 1168 aa6.61□□□□□ -1.35
ATXN3-230ENST00000554673 COBLO75128 1261 aa6.61□□□□□ -1.35
ATXN3-230ENST00000554673 MED24O75448 989 aa6.61□□□□□ -1.35
ATXN3-230ENST00000554673 PSMD10O75832 226 aa6.61□□□□□ -1.35
ATXN3-230ENST00000554673 MBD3O95983 291 aa6.61□□□□□ -1.35
ATXN3-230ENST00000554673 CCNE2O96020 404 aa6.61□□□□□ -1.35
ATXN3-230ENST00000554673 CYP2C8P10632 490 aa6.61□□□□□ -1.35
ATXN3-230ENST00000554673 CALML3P27482 149 aa6.61□□□□□ -1.35
ATXN3-230ENST00000554673 GTF2F1P35269 517 aaKnown RBP eCLIP6.61□□□□□ -1.35
ATXN3-230ENST00000554673 MAPK8P45983 427 aa6.61□□□□□ -1.35
ATXN3-230ENST00000554673 RPS6P62753 249 aaKnown RBP6.61□□□□□ -1.35
ATXN3-230ENST00000554673 SP2Q02086 613 aa6.61□□□□□ -1.35
ATXN3-230ENST00000554673 PPATQ06203 517 aa6.61□□□□□ -1.35
ATXN3-230ENST00000554673 TYRO3Q06418 890 aa6.61□□□□□ -1.35
ATXN3-230ENST00000554673 POU4F2Q12837 409 aa6.61□□□□□ -1.35
ATXN3-230ENST00000554673 PSMD2Q13200 908 aa6.61□□□□□ -1.35
ATXN3-230ENST00000554673 BAATQ14032 418 aaPredicted RBP6.61□□□□□ -1.35
ATXN3-230ENST00000554673 SUPT20HL1Q3ZLR7 823 aa6.61□□□□□ -1.35
ATXN3-230ENST00000554673 ISM2Q6H9L7 571 aa6.61□□□□□ -1.35
ATXN3-230ENST00000554673 SDE2Q6IQ49 451 aa6.61□□□□□ -1.35
ATXN3-230ENST00000554673 GALNT17Q6IS24 598 aa6.61□□□□□ -1.35
ATXN3-230ENST00000554673 MAMDC4Q6UXC1 1216 aa6.61□□□□□ -1.35
ATXN3-230ENST00000554673 FAM160B2Q86V87 743 aa6.61□□□□□ -1.35
ATXN3-230ENST00000554673 FCHSD1Q86WN1 690 aa6.61□□□□□ -1.35
ATXN3-230ENST00000554673 ERO1BQ86YB8 467 aa6.61□□□□□ -1.35
ATXN3-230ENST00000554673 RASAL3Q86YV0 1011 aa6.61□□□□□ -1.35
ATXN3-230ENST00000554673 DHX40Q8IX18 779 aaKnown RBP6.61□□□□□ -1.35
ATXN3-230ENST00000554673 SMYD4Q8IYR2 804 aaPredicted RBP6.61□□□□□ -1.35
ATXN3-230ENST00000554673 CPXCR1Q8N123 301 aa6.61□□□□□ -1.35
ATXN3-230ENST00000554673 PDILTQ8N807 584 aa6.61□□□□□ -1.35
ATXN3-230ENST00000554673 ZNF713Q8N859 430 aaPredicted RBP6.61□□□□□ -1.35
ATXN3-230ENST00000554673 PRPF38AQ8NAV1 312 aaKnown RBP6.61□□□□□ -1.35
ATXN3-230ENST00000554673 CCDC148Q8NFR7 591 aa6.61□□□□□ -1.35
ATXN3-230ENST00000554673 KCNG4Q8TDN1 519 aa6.61□□□□□ -1.35
ATXN3-230ENST00000554673 HPS3Q969F9 1004 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms