RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.8□□□□□ -1.8
SEC23A-207ENST00000554615 C3orf70A6NLC5 250 aaPredicted RBP3.8□□□□□ -1.8
SEC23A-207ENST00000554615 ABCB7O75027 752 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 ZBED4O75132 1171 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 MED24O75448 989 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 UNGP13051 313 aaPredicted RBP3.8□□□□□ -1.8
SEC23A-207ENST00000554615 HNRNPH2P55795 449 aaKnown RBP3.8□□□□□ -1.8
SEC23A-207ENST00000554615 FKBP3Q00688 224 aaKnown RBP3.8□□□□□ -1.8
SEC23A-207ENST00000554615 SETQ01105 290 aaPredicted RBP3.8□□□□□ -1.8
SEC23A-207ENST00000554615 RAD51AP2Q09MP3 1159 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 BIRC3Q13489 604 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 ITIH4Q14624 930 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 Q3C1V9 767 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 CDCA2Q69YH5 1023 aaPredicted RBP3.8□□□□□ -1.8
SEC23A-207ENST00000554615 TPTE2Q6XPS3 522 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 CYFIP1Q7L576 1253 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 ARCQ7LC44 396 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 PTF1AQ7RTS3 328 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 PODNQ7Z5L7 613 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 ZDHHC14Q8IZN3 488 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 AFAP1L1Q8TED9 768 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 AFG1LQ8WV93 481 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 SGIP1Q9BQI5 828 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 UBAC1Q9BSL1 405 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 WDR18Q9BV38 432 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 SELENOOQ9BVL4 669 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 STK33Q9BYT3 514 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 MRM3Q9HC36 420 aaKnown RBP3.8□□□□□ -1.8
SEC23A-207ENST00000554615 ARFGAP3Q9NP61 516 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 STIM2Q9P246 746 aa3.8□□□□□ -1.8
SEC23A-207ENST00000554615 CYP2D7A0A087X1C5 515 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 TRIM49BA6NDI0 452 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 BECN2A8MW95 431 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 HMGB1P1B2RPK0 211 aaPredicted RBP3.79□□□□□ -1.8
SEC23A-207ENST00000554615 E7ESA3 106 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 CPLX1O14810 134 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 PSMA7O14818 248 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 FSCN2O14926 492 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 TRAPPC3O43617 180 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 MGRN1O60291 552 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 GJB6O95452 261 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 FDX1P10109 184 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 POLD1P28340 1107 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 CYLC1P35663 651 aaPredicted RBP3.79□□□□□ -1.8
SEC23A-207ENST00000554615 BTDP43251 543 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 KCNJ4P48050 445 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 RBM10P98175 930 aaKnown RBP3.79□□□□□ -1.8
SEC23A-207ENST00000554615 TFAP4Q01664 338 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 DHX34Q14147 1143 aaKnown RBP3.79□□□□□ -1.8
SEC23A-207ENST00000554615 SYDE2Q5VT97 1194 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 FOXD4L5Q5VV16 416 aaPredicted RBP3.79□□□□□ -1.8
SEC23A-207ENST00000554615 IRAK1BP1Q5VVH5 260 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 KCNV1Q6PIU1 500 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 TMCO3Q6UWJ1 677 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 ARMC9Q7Z3E5 817 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 ZNF571Q7Z3V5 609 aaPredicted RBP3.79□□□□□ -1.8
SEC23A-207ENST00000554615 MNS1Q8NEH6 495 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 OR6Y1Q8NGX8 325 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 FOXD4L4Q8WXT5 416 aaPredicted RBP3.79□□□□□ -1.8
SEC23A-207ENST00000554615 DPF3Q92784 378 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 CCDC34Q96HJ3 373 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 SDF4Q9BRK5 362 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 FOXP3Q9BZS1 431 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 KDM4CQ9H3R0 1056 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 METTL14Q9HCE5 456 aaKnown RBP3.79□□□□□ -1.8
SEC23A-207ENST00000554615 NLRC4Q9NPP4 1024 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 ST7Q9NRC1 585 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 AAASQ9NRG9 546 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 UMODL1Q5DID0 1318 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 IGKV6-21A0A0C4DH24 114 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 ERICH2A1L162 156 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 KLRF2D3W0D1 207 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 F8VZ95 297 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 DDX3XO00571 662 aaKnown RBP eCLIP3.79□□□□□ -1.8
SEC23A-207ENST00000554615 LIN7AO14910 233 aaPredicted RBP3.79□□□□□ -1.8
SEC23A-207ENST00000554615 KIAA0391O15091 583 aaKnown RBP3.79□□□□□ -1.8
SEC23A-207ENST00000554615 SOX12O15370 315 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 PPIP5K2O43314 1243 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 KIF5CO60282 957 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 PRDM1O75626 825 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 STAM2O75886 525 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 BAG3O95817 575 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 LDHBP07195 334 aaKnown RBP3.79□□□□□ -1.8
SEC23A-207ENST00000554615 HSPA6P17066 643 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 GCAP28676 217 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 GUCY1B3Q02153 619 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 POU5F1BQ06416 359 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 RAPGEF1Q13905 1077 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 KARSQ15046 597 aaKnown RBP3.79□□□□□ -1.8
SEC23A-207ENST00000554615 PCNX4Q63HM2 1172 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 PIK3AP1Q6ZUJ8 805 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 CYS1Q717R9 158 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 TMC3Q7Z5M5 1100 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 ZNF677Q86XU0 584 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 COL23A1Q86Y22 540 aaPredicted RBP3.79□□□□□ -1.8
SEC23A-207ENST00000554615 ANKLE1Q8NAG6 615 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 FLAD1Q8NFF5 587 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 TBCKQ8TEA7 893 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 DENND1AQ8TEH3 1009 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 ISL2Q96A47 359 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms