RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 TDRD3Q9H7E2 651 aaKnown RBP6.14□□□□□ -1.43
ATXN3-228ENST00000554592 C19orf73Q9NVV2 129 aa6.14□□□□□ -1.43
ATXN3-228ENST00000554592 PRKAG3Q9UGI9 489 aa6.14□□□□□ -1.43
ATXN3-228ENST00000554592 CPA4Q9UI42 421 aa6.14□□□□□ -1.43
ATXN3-228ENST00000554592 RNF114Q9Y508 228 aa6.14□□□□□ -1.43
ATXN3-228ENST00000554592 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.14□□□□□ -1.43
ATXN3-228ENST00000554592 AOX1Q06278 1338 aa6.14□□□□□ -1.43
ATXN3-228ENST00000554592 TRIOBPQ9H2D6 2365 aa6.13□□□□□ -1.43
ATXN3-228ENST00000554592 ANKRD18BA2A2Z9 1011 aa6.13□□□□□ -1.43
ATXN3-228ENST00000554592 MEIS3P2A8K0S8 358 aa6.13□□□□□ -1.43
ATXN3-228ENST00000554592 TCP10L2B9ZVM9 353 aa6.13□□□□□ -1.43
ATXN3-228ENST00000554592 SNAP23O00161 211 aa6.13□□□□□ -1.43
ATXN3-228ENST00000554592 TFRCP02786 760 aaKnown RBP6.13□□□□□ -1.43
ATXN3-228ENST00000554592 CTGFP29279 349 aa6.13□□□□□ -1.43
ATXN3-228ENST00000554592 GNAI1P63096 354 aa6.13□□□□□ -1.43
ATXN3-228ENST00000554592 CALD1Q05682 793 aaKnown RBP6.13□□□□□ -1.43
ATXN3-228ENST00000554592 PPATQ06203 517 aa6.13□□□□□ -1.43
ATXN3-228ENST00000554592 RALBP1Q15311 655 aa6.13□□□□□ -1.43
ATXN3-228ENST00000554592 GAB4Q2WGN9 574 aa6.13□□□□□ -1.43
ATXN3-228ENST00000554592 CCDC144BQ3MJ40 725 aa6.13□□□□□ -1.43
ATXN3-228ENST00000554592 RUFY4Q6ZNE9 571 aa6.13□□□□□ -1.43
ATXN3-228ENST00000554592 UBE3BQ7Z3V4 1068 aa6.13□□□□□ -1.43
ATXN3-228ENST00000554592 ANKRD23Q86SG2 305 aa6.13□□□□□ -1.43
ATXN3-228ENST00000554592 CKAP2LQ8IYA6 745 aa6.13□□□□□ -1.43
ATXN3-228ENST00000554592 CCDC146Q8IYE0 955 aa6.13□□□□□ -1.43
ATXN3-228ENST00000554592 GDF15Q99988 308 aa6.13□□□□□ -1.43
ATXN3-228ENST00000554592 TMEM39BQ9GZU3 492 aa6.13□□□□□ -1.43
ATXN3-228ENST00000554592 CARS2Q9HA77 564 aaKnown RBP6.13□□□□□ -1.43
ATXN3-228ENST00000554592 IFT57Q9NWB7 429 aa6.13□□□□□ -1.43
ATXN3-228ENST00000554592 KLHL3Q9UH77 587 aa6.13□□□□□ -1.43
ATXN3-228ENST00000554592 FAM205AQ6ZU69 1335 aa6.13□□□□□ -1.43
ATXN3-228ENST00000554592 MYPNQ86TC9 1320 aa6.13□□□□□ -1.43
ATXN3-228ENST00000554592 IRS2Q9Y4H2 1338 aa6.13□□□□□ -1.43
ATXN3-228ENST00000554592 TAF1P21675 1872 aa6.13□□□□□ -1.43
ATXN3-228ENST00000554592 PDHXO00330 501 aa6.12□□□□□ -1.43
ATXN3-228ENST00000554592 LRRN2O75325 713 aa6.12□□□□□ -1.43
ATXN3-228ENST00000554592 ESR1P03372 595 aa6.12□□□□□ -1.43
ATXN3-228ENST00000554592 LAMB2P55268 1798 aa6.12□□□□□ -1.43
ATXN3-228ENST00000554592 IFIT5Q13325 482 aaKnown RBP6.12□□□□□ -1.43
ATXN3-228ENST00000554592 GCKRQ14397 625 aa6.12□□□□□ -1.43
ATXN3-228ENST00000554592 LRIT3Q3SXY7 679 aa6.12□□□□□ -1.43
ATXN3-228ENST00000554592 MFSD14BQ5SR56 506 aa6.12□□□□□ -1.43
ATXN3-228ENST00000554592 DDX60Q8IY21 1712 aaKnown RBP6.12□□□□□ -1.43
ATXN3-228ENST00000554592 C8orf58Q8NAV2 365 aa6.12□□□□□ -1.43
ATXN3-228ENST00000554592 DTWD2Q8NBA8 298 aa6.12□□□□□ -1.43
ATXN3-228ENST00000554592 OR6P1Q8NGX9 317 aa6.12□□□□□ -1.43
ATXN3-228ENST00000554592 TDRD7Q8NHU6 1098 aaKnown RBP6.12□□□□□ -1.43
ATXN3-228ENST00000554592 RNF141Q8WVD5 230 aa6.12□□□□□ -1.43
ATXN3-228ENST00000554592 HNRNPLLQ8WVV9 542 aaKnown RBP6.12□□□□□ -1.43
ATXN3-228ENST00000554592 TMEM40Q8WWA1 233 aa6.12□□□□□ -1.43
ATXN3-228ENST00000554592 ZKSCAN4Q969J2 545 aaPredicted RBP6.12□□□□□ -1.43
ATXN3-228ENST00000554592 ASIC4Q96FT7 647 aa6.12□□□□□ -1.43
ATXN3-228ENST00000554592 CCDC74BQ96LY2 380 aa6.12□□□□□ -1.43
ATXN3-228ENST00000554592 KREMEN1Q96MU8 473 aa6.12□□□□□ -1.43
ATXN3-228ENST00000554592 WRNIP1Q96S55 665 aa6.12□□□□□ -1.43
ATXN3-228ENST00000554592 MRIQ9BWK5 157 aa6.12□□□□□ -1.43
ATXN3-228ENST00000554592 GPR62Q9BZJ7 368 aa6.12□□□□□ -1.43
ATXN3-228ENST00000554592 MTMR10Q9NXD2 777 aa6.12□□□□□ -1.43
ATXN3-228ENST00000554592 GMIPQ9P107 970 aa6.12□□□□□ -1.43
ATXN3-228ENST00000554592 ZSWIM5Q9P217 1185 aa6.12□□□□□ -1.43
ATXN3-228ENST00000554592 CTNND2Q9UQB3 1225 aa6.12□□□□□ -1.43
ATXN3-228ENST00000554592 JAG2Q9Y219 1238 aa6.12□□□□□ -1.43
ATXN3-228ENST00000554592 RGS13O14921 159 aa6.11□□□□□ -1.43
ATXN3-228ENST00000554592 ADCY3O60266 1144 aa6.11□□□□□ -1.43
ATXN3-228ENST00000554592 UBOX5O94941 541 aa6.11□□□□□ -1.43
ATXN3-228ENST00000554592 HIBADHP31937 336 aaKnown RBP6.11□□□□□ -1.43
ATXN3-228ENST00000554592 CASP7P55210 303 aa6.11□□□□□ -1.43
ATXN3-228ENST00000554592 PRKCZQ05513 592 aa6.11□□□□□ -1.43
ATXN3-228ENST00000554592 SERINC3Q13530 473 aa6.11□□□□□ -1.43
ATXN3-228ENST00000554592 RAB33AQ14088 237 aa6.11□□□□□ -1.43
ATXN3-228ENST00000554592 LRRFIP1Q32MZ4 808 aaKnown RBP6.11□□□□□ -1.43
ATXN3-228ENST00000554592 FKBP1CQ5VVH2 108 aa6.11□□□□□ -1.43
ATXN3-228ENST00000554592 CDCP2Q5VXM1 449 aa6.11□□□□□ -1.43
ATXN3-228ENST00000554592 DCAF15Q66K64 600 aa6.11□□□□□ -1.43
ATXN3-228ENST00000554592 OVOS1Q6IE37 1185 aa6.11□□□□□ -1.43
ATXN3-228ENST00000554592 NECAB2Q7Z6G3 386 aa6.11□□□□□ -1.43
ATXN3-228ENST00000554592 FAM83AQ86UY5 434 aa6.11□□□□□ -1.43
ATXN3-228ENST00000554592 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.11□□□□□ -1.43
ATXN3-228ENST00000554592 ATG4CQ96DT6 458 aa6.11□□□□□ -1.43
ATXN3-228ENST00000554592 PAWRQ96IZ0 340 aaKnown RBP6.11□□□□□ -1.43
ATXN3-228ENST00000554592 DEFB118Q96PH6 123 aa6.11□□□□□ -1.43
ATXN3-228ENST00000554592 PARK7Q99497 189 aaKnown RBP6.11□□□□□ -1.43
ATXN3-228ENST00000554592 KIF2CQ99661 725 aa6.11□□□□□ -1.43
ATXN3-228ENST00000554592 ZNF341Q9BYN7 854 aa6.11□□□□□ -1.43
ATXN3-228ENST00000554592 HTTP42858 3142 aa6.11□□□□□ -1.43
ATXN3-228ENST00000554592 SZT2Q5T011 3432 aa6.11□□□□□ -1.43
ATXN3-228ENST00000554592 CXCL11O14625 94 aa6.1□□□□□ -1.43
ATXN3-228ENST00000554592 PLIN1O60240 522 aa6.1□□□□□ -1.43
ATXN3-228ENST00000554592 FLT3LGP49771 235 aa6.1□□□□□ -1.43
ATXN3-228ENST00000554592 UBE4AQ14139 1066 aa6.1□□□□□ -1.43
ATXN3-228ENST00000554592 WDR43Q15061 677 aaKnown RBP eCLIP6.1□□□□□ -1.43
ATXN3-228ENST00000554592 TNNI3KQ59H18 835 aa6.1□□□□□ -1.43
ATXN3-228ENST00000554592 LDHAL6AQ6ZMR3 332 aa6.1□□□□□ -1.43
ATXN3-228ENST00000554592 Q7L0L9 218 aa6.1□□□□□ -1.43
ATXN3-228ENST00000554592 MIGA2Q7L4E1 593 aa6.1□□□□□ -1.43
ATXN3-228ENST00000554592 TBC1D22AQ8WUA7 517 aa6.1□□□□□ -1.43
ATXN3-228ENST00000554592 FAM84BQ96KN1 310 aaPredicted RBP6.1□□□□□ -1.43
ATXN3-228ENST00000554592 STK31Q9BXU1 1019 aa6.1□□□□□ -1.43
ATXN3-228ENST00000554592 OSBPL2Q9H1P3 480 aa6.1□□□□□ -1.43
ATXN3-228ENST00000554592 PIF1Q9H611 641 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms