RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 DDX41Q9UJV9 622 aaKnown RBP3.05□□□□□ -1.92
PRPF39-206ENST00000554429 NDUFB9Q9Y6M9 179 aa3.05□□□□□ -1.92
PRPF39-206ENST00000554429 ZHX2Q9Y6X8 837 aa3.05□□□□□ -1.92
PRPF39-206ENST00000554429 CCDC196A0A1B0GTZ2 297 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 VSTM5A8MXK1 200 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 TMCO5BA8MYB1 307 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 H0YHG0 523 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 FOXN3O00409 490 aaPredicted RBP3.04□□□□□ -1.92
PRPF39-206ENST00000554429 ATP9BO43861 1147 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 LZTS3O60299 673 aaPredicted RBP3.04□□□□□ -1.92
PRPF39-206ENST00000554429 KIAA0754O94854 1291 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 CCDC159P0C7I6 412 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 CYP2C8P10632 490 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 KRT10P13645 584 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 RPL17P18621 184 aaKnown RBP3.04□□□□□ -1.92
PRPF39-206ENST00000554429 ETFBP38117 255 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 RGS2P41220 211 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 BTDP43251 543 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 MAGEA10P43363 369 aaPredicted RBP3.04□□□□□ -1.92
PRPF39-206ENST00000554429 CACNB3P54284 484 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 EPHB1P54762 984 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 RRP1P56182 461 aaKnown RBP3.04□□□□□ -1.92
PRPF39-206ENST00000554429 CLDN10P78369 228 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 SARNPP82979 210 aaKnown RBP3.04□□□□□ -1.92
PRPF39-206ENST00000554429 CHAF1AQ13111 956 aaPredicted RBP3.04□□□□□ -1.92
PRPF39-206ENST00000554429 PAK2Q13177 524 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 RASGRF1Q13972 1273 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 GRB14Q14449 540 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 TREML2Q5T2D2 321 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 C10orf76Q5T2E6 689 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 CTR9Q6PD62 1173 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 KCNV1Q6PIU1 500 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 USP17L2Q6R6M4 530 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 CCDC129Q6ZRS4 1044 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 CATSPER4Q7RTX7 472 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 TMC7Q7Z402 723 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 KIAA0907Q7Z7F0 614 aaPredicted RBP3.04□□□□□ -1.92
PRPF39-206ENST00000554429 WHAMMQ8TF30 809 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 TRIB2Q92519 343 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 JAKMIP2Q96AA8 810 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 ZBTB10Q96DT7 871 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 DEFB118Q96PH6 123 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 GSDMAQ96QA5 445 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 HAUS7Q99871 368 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 NUDT12Q9BQG2 462 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 CCDC8Q9H0W5 538 aaPredicted RBP3.04□□□□□ -1.92
PRPF39-206ENST00000554429 EPB41L4AQ9HCS5 686 aaPredicted RBP3.04□□□□□ -1.92
PRPF39-206ENST00000554429 PI4KBQ9UBF8 816 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 USP17L15C9J2P7 530 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 USP17L10C9JJH3 530 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 USP17L13C9JLJ4 530 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 USP17L12C9JPN9 530 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 USP17L11C9JVI0 530 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 USP17L21D6R901 530 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 USP17L18D6R9N7 530 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 USP17L22D6RA61 530 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 USP17L17D6RBQ6 530 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 USP17L19D6RCP7 530 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 USP17L20D6RJB6 530 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 SIAH2O43255 324 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 SGTAO43765 313 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 ICMTO60725 284 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 ARIH2O95376 493 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 ASNSP08243 561 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 PHKA1P46020 1223 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 POLR2FP61218 127 aaKnown RBP3.04□□□□□ -1.92
PRPF39-206ENST00000554429 USP17L24Q0WX57 530 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 COX10Q12887 443 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 TRIM14Q14142 442 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 ELOAQ14241 798 aaKnown RBP3.04□□□□□ -1.92
PRPF39-206ENST00000554429 MYBPC3Q14896 1274 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 MLC1Q15049 377 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 DIXDC1Q155Q3 683 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 ASIC2Q16515 512 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 MIGA2Q7L4E1 593 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 SLC17A8Q8NDX2 589 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 MNS1Q8NEH6 495 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 GPRC5AQ8NFJ5 357 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 HNRNPLLQ8WVV9 542 aaKnown RBP3.04□□□□□ -1.92
PRPF39-206ENST00000554429 SSH1Q8WYL5 1049 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 LPAR1Q92633 364 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 BHMTQ93088 406 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 ASIC4Q96FT7 647 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 PRIMPOLQ96LW4 560 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 GUCD1Q96NT3 240 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 DESI2Q9BSY9 194 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 PANK2Q9BZ23 570 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 GTPBP4Q9BZE4 634 aaKnown RBP3.04□□□□□ -1.92
PRPF39-206ENST00000554429 NACA2Q9H009 215 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 KIAA1683Q9H0B3 1180 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 FAM217BQ9NTX9 383 aaPredicted RBP3.04□□□□□ -1.92
PRPF39-206ENST00000554429 PDRG1Q9NUG6 133 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 UBAP1Q9NZ09 502 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 TBC1D7Q9P0N9 293 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 RBPJLQ9UBG7 517 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 ZMAT5Q9UDW3 170 aaKnown RBP3.04□□□□□ -1.92
PRPF39-206ENST00000554429 MKL2Q9ULH7 1088 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 JAG2Q9Y219 1238 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 TMX2Q9Y320 296 aa3.04□□□□□ -1.92
PRPF39-206ENST00000554429 LRRFIP2Q9Y608 721 aaKnown RBP3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms