RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 PPP2R5CQ13362 524 aa14.71□□□□□ -0.05
SHMT2-211ENST00000554310 LPIN1Q14693 890 aa14.71□□□□□ -0.05
SHMT2-211ENST00000554310 GRIN2CQ14957 1233 aa14.71□□□□□ -0.05
SHMT2-211ENST00000554310 FBXO47Q5MNV8 452 aa14.71□□□□□ -0.05
SHMT2-211ENST00000554310 TSHZ1Q6ZSZ6 1077 aa14.71□□□□□ -0.05
SHMT2-211ENST00000554310 NME8Q8N427 588 aa14.71□□□□□ -0.05
SHMT2-211ENST00000554310 USP38Q8NB14 1042 aa14.71□□□□□ -0.05
SHMT2-211ENST00000554310 MYLIPQ8WY64 445 aa14.71□□□□□ -0.05
SHMT2-211ENST00000554310 C8orf76Q96K31 380 aa14.71□□□□□ -0.05
SHMT2-211ENST00000554310 VAV3Q9UKW4 847 aa14.71□□□□□ -0.05
SHMT2-211ENST00000554310 SQORQ9Y6N5 450 aa14.71□□□□□ -0.05
SHMT2-211ENST00000554310 BTBD18B2RXH4 712 aa14.7□□□□□ -0.06
SHMT2-211ENST00000554310 MAGEB2O15479 319 aa14.7□□□□□ -0.06
SHMT2-211ENST00000554310 TLL1O43897 1013 aa14.7□□□□□ -0.06
SHMT2-211ENST00000554310 ZNF862O60290 1169 aa14.7□□□□□ -0.06
SHMT2-211ENST00000554310 MYOGP15173 224 aa14.7□□□□□ -0.06
SHMT2-211ENST00000554310 UGCGQ16739 394 aa14.7□□□□□ -0.06
SHMT2-211ENST00000554310 POTEDQ86YR6 584 aa14.7□□□□□ -0.06
SHMT2-211ENST00000554310 SLFN12Q8IYM2 578 aa14.7□□□□□ -0.06
SHMT2-211ENST00000554310 FAM184AQ8NB25 1140 aa14.7□□□□□ -0.06
SHMT2-211ENST00000554310 ZBED2Q9BTP6 218 aa14.7□□□□□ -0.06
SHMT2-211ENST00000554310 OSBPL7Q9BZF2 842 aa14.7□□□□□ -0.06
SHMT2-211ENST00000554310 NRBP2Q9NSY0 501 aa14.7□□□□□ -0.06
SHMT2-211ENST00000554310 COL6A3P12111 3177 aa14.69□□□□□ -0.06
SHMT2-211ENST00000554310 CHD7Q9P2D1 2997 aa14.69□□□□□ -0.06
SHMT2-211ENST00000554310 MARCH6O60337 910 aa14.69□□□□□ -0.06
SHMT2-211ENST00000554310 MCM2P49736 904 aa14.69□□□□□ -0.06
SHMT2-211ENST00000554310 XKR3Q5GH77 459 aa14.69□□□□□ -0.06
SHMT2-211ENST00000554310 FAM43BQ6ZT52 329 aaPredicted RBP14.69□□□□□ -0.06
SHMT2-211ENST00000554310 MYOCDQ8IZQ8 938 aa14.69□□□□□ -0.06
SHMT2-211ENST00000554310 HAS1Q92839 578 aa14.69□□□□□ -0.06
SHMT2-211ENST00000554310 GAS2L1Q99501 681 aaPredicted RBP14.69□□□□□ -0.06
SHMT2-211ENST00000554310 CELF4Q9BZC1 486 aaKnown RBP14.69□□□□□ -0.06
SHMT2-211ENST00000554310 COL4A4P53420 1690 aaPredicted RBP14.68□□□□□ -0.06
SHMT2-211ENST00000554310 TRANK1O15050 2925 aa14.68□□□□□ -0.06
SHMT2-211ENST00000554310 DKC1O60832 514 aaKnown RBP eCLIP14.68□□□□□ -0.06
SHMT2-211ENST00000554310 BAG4O95429 457 aaKnown RBP14.68□□□□□ -0.06
SHMT2-211ENST00000554310 PSMC5P62195 406 aa14.68□□□□□ -0.06
SHMT2-211ENST00000554310 TMEM62Q0P6H9 643 aa14.68□□□□□ -0.06
SHMT2-211ENST00000554310 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.68□□□□□ -0.064e-7■□□□□ 9.3
SHMT2-211ENST00000554310 TMCO2Q7Z6W1 182 aaPredicted RBP14.68□□□□□ -0.06
SHMT2-211ENST00000554310 KIAA0319LQ8IZA0 1049 aa14.68□□□□□ -0.06
SHMT2-211ENST00000554310 ZNF710Q8N1W2 664 aa14.68□□□□□ -0.06
SHMT2-211ENST00000554310 FBXO18Q8NFZ0 1043 aa14.68□□□□□ -0.06
SHMT2-211ENST00000554310 SNX21Q969T3 373 aa14.68□□□□□ -0.06
SHMT2-211ENST00000554310 MAP7D2Q96T17 732 aa14.68□□□□□ -0.06
SHMT2-211ENST00000554310 RAD9AQ99638 391 aa14.68□□□□□ -0.06
SHMT2-211ENST00000554310 FTHL17Q9BXU8 183 aa14.68□□□□□ -0.06
SHMT2-211ENST00000554310 FOXP1Q9H334 677 aaPredicted RBP14.68□□□□□ -0.06
SHMT2-211ENST00000554310 PRDM12Q9H4Q4 367 aa14.68□□□□□ -0.06
SHMT2-211ENST00000554310 SEPT9Q9UHD8 586 aaPredicted RBP14.68□□□□□ -0.06
SHMT2-211ENST00000554310 KIF3AQ9Y496 699 aa14.68□□□□□ -0.06
SHMT2-211ENST00000554310 TTC3P53804 2025 aa14.67□□□□□ -0.06
SHMT2-211ENST00000554310 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.67□□□□□ -0.06
SHMT2-211ENST00000554310 NEMFO60524 1076 aa14.67□□□□□ -0.06
SHMT2-211ENST00000554310 TMOD1P28289 359 aa14.67□□□□□ -0.06
SHMT2-211ENST00000554310 GUCY1B3Q02153 619 aa14.67□□□□□ -0.06
SHMT2-211ENST00000554310 TAP1Q03518 808 aa14.67□□□□□ -0.06
SHMT2-211ENST00000554310 TBC1D8BQ0IIM8 1120 aa14.67□□□□□ -0.06
SHMT2-211ENST00000554310 PAK2Q13177 524 aa14.67□□□□□ -0.06
SHMT2-211ENST00000554310 ORC2Q13416 577 aaPredicted RBP14.67□□□□□ -0.06
SHMT2-211ENST00000554310 TARBP2Q15633 366 aaKnown RBP14.67□□□□□ -0.06
SHMT2-211ENST00000554310 CALCRLQ16602 461 aa14.67□□□□□ -0.06
SHMT2-211ENST00000554310 TRMT1LQ7Z2T5 733 aaKnown RBP14.67□□□□□ -0.06
SHMT2-211ENST00000554310 METTL13Q8N6R0 699 aa14.67□□□□□ -0.06
SHMT2-211ENST00000554310 LINC01465Q8N7H1 131 aa14.67□□□□□ -0.06
SHMT2-211ENST00000554310 MAFAQ8NHW3 353 aaPredicted RBP14.67□□□□□ -0.06
SHMT2-211ENST00000554310 NIFKQ9BYG3 293 aaKnown RBP14.67□□□□□ -0.06
SHMT2-211ENST00000554310 AGO3Q9H9G7 860 aaKnown RBP14.67□□□□□ -0.06
SHMT2-211ENST00000554310 INSL6Q9Y581 213 aa14.67□□□□□ -0.06
SHMT2-211ENST00000554310 ARID2Q68CP9 1835 aa14.66□□□□□ -0.06
SHMT2-211ENST00000554310 LCHNA4D1U4 455 aa14.66□□□□□ -0.06
SHMT2-211ENST00000554310 EML1O00423 815 aa14.66□□□□□ -0.06
SHMT2-211ENST00000554310 CD52P31358 61 aa14.66□□□□□ -0.06
SHMT2-211ENST00000554310 QARSP47897 775 aaKnown RBP14.66□□□□□ -0.06
SHMT2-211ENST00000554310 HTRA4P83105 476 aaPredicted RBP14.66□□□□□ -0.06
SHMT2-211ENST00000554310 SPIRE1Q08AE8 756 aa14.66□□□□□ -0.06
SHMT2-211ENST00000554310 ODR4Q5SWX8 454 aa14.66□□□□□ -0.06
SHMT2-211ENST00000554310 FAM117BQ6P1L5 589 aa14.66□□□□□ -0.06
SHMT2-211ENST00000554310 BANK1Q8NDB2 785 aa14.66□□□□□ -0.06
SHMT2-211ENST00000554310 SP7Q8TDD2 431 aaPredicted RBP14.66□□□□□ -0.06
SHMT2-211ENST00000554310 TOP1MTQ969P6 601 aa14.66□□□□□ -0.06
SHMT2-211ENST00000554310 TMX3Q96JJ7 454 aa14.66□□□□□ -0.06
SHMT2-211ENST00000554310 GINS2Q9Y248 185 aa14.66□□□□□ -0.06
SHMT2-211ENST00000554310 RALGAPA2Q2PPJ7 1873 aa14.65□□□□□ -0.06
SHMT2-211ENST00000554310 CUL9Q8IWT3 2517 aa14.65□□□□□ -0.06
SHMT2-211ENST00000554310 ARHGEF15O94989 841 aa14.65□□□□□ -0.06
SHMT2-211ENST00000554310 STBD1O95210 358 aa14.65□□□□□ -0.06
SHMT2-211ENST00000554310 CD2BP2O95400 341 aaKnown RBP14.65□□□□□ -0.06
SHMT2-211ENST00000554310 P4HBP07237 508 aaKnown RBP14.65□□□□□ -0.06
SHMT2-211ENST00000554310 CLCN3P51790 818 aa14.65□□□□□ -0.06
SHMT2-211ENST00000554310 CRYBB1P53674 252 aaPredicted RBP14.65□□□□□ -0.06
SHMT2-211ENST00000554310 GNL2Q13823 731 aaKnown RBP14.65□□□□□ -0.06
SHMT2-211ENST00000554310 EPHA7Q15375 998 aa14.65□□□□□ -0.06
SHMT2-211ENST00000554310 MTERF2Q49AM1 385 aa14.65□□□□□ -0.06
SHMT2-211ENST00000554310 NCAPH2Q6IBW4 605 aa14.65□□□□□ -0.06
SHMT2-211ENST00000554310 EFCAB12Q6NXP0 572 aa14.65□□□□□ -0.06
SHMT2-211ENST00000554310 NOSTRINQ8IVI9 506 aa14.65□□□□□ -0.06
SHMT2-211ENST00000554310 YME1L1Q96TA2 773 aa14.65□□□□□ -0.06
SHMT2-211ENST00000554310 LXNQ9BS40 222 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms