RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 PIK3CDO00329 1044 aa8.83□□□□□ -1
ABCD4-220ENST00000553998 PER2O15055 1255 aa8.83□□□□□ -1
ABCD4-220ENST00000553998 CYTH3O43739 400 aa8.83□□□□□ -1
ABCD4-220ENST00000553998 ATP9AO75110 1047 aa8.83□□□□□ -1
ABCD4-220ENST00000553998 PDGFBP01127 241 aaPredicted RBP8.83□□□□□ -1
ABCD4-220ENST00000553998 SCG2P13521 617 aa8.83□□□□□ -1
ABCD4-220ENST00000553998 CPA1P15085 419 aa8.83□□□□□ -1
ABCD4-220ENST00000553998 KCNA2P16389 499 aa8.83□□□□□ -1
ABCD4-220ENST00000553998 HOXB8P17481 243 aaPredicted RBP8.83□□□□□ -1
ABCD4-220ENST00000553998 GNAQP50148 359 aa8.83□□□□□ -1
ABCD4-220ENST00000553998 ERVFC1P60507 584 aa8.83□□□□□ -1
ABCD4-220ENST00000553998 RBM10P98175 930 aaKnown RBP8.83□□□□□ -1
ABCD4-220ENST00000553998 PLCB3Q01970 1234 aa8.83□□□□□ -1
ABCD4-220ENST00000553998 GRM4Q14833 912 aa8.83□□□□□ -1
ABCD4-220ENST00000553998 ANKRD54Q6NXT1 300 aa8.83□□□□□ -1
ABCD4-220ENST00000553998 APOA5Q6Q788 366 aa8.83□□□□□ -1
ABCD4-220ENST00000553998 Q6ZUG5 572 aa8.83□□□□□ -1
ABCD4-220ENST00000553998 NME8Q8N427 588 aa8.83□□□□□ -1
ABCD4-220ENST00000553998 TMEM105Q8N8V8 129 aa8.83□□□□□ -1
ABCD4-220ENST00000553998 CTCFLQ8NI51 663 aaPredicted RBP8.83□□□□□ -1
ABCD4-220ENST00000553998 BRF1Q92994 677 aa8.83□□□□□ -1
ABCD4-220ENST00000553998 GPRASP2Q96D09 838 aa8.83□□□□□ -1
ABCD4-220ENST00000553998 TCEANC2Q96MN5 208 aa8.83□□□□□ -1
ABCD4-220ENST00000553998 KIF2CQ99661 725 aa8.83□□□□□ -1
ABCD4-220ENST00000553998 LZTS2Q9BRK4 669 aa8.83□□□□□ -1
ABCD4-220ENST00000553998 TMX1Q9H3N1 280 aa8.83□□□□□ -1
ABCD4-220ENST00000553998 SMARCAD1Q9H4L7 1026 aa8.83□□□□□ -1
ABCD4-220ENST00000553998 SENP2Q9HC62 589 aa8.83□□□□□ -1
ABCD4-220ENST00000553998 PCDHB12Q9Y5F1 795 aa8.83□□□□□ -1
ABCD4-220ENST00000553998 PCDHGC5Q9Y5F6 944 aa8.83□□□□□ -1
ABCD4-220ENST00000553998 TTC3P53804 2025 aa8.83□□□□□ -1
ABCD4-220ENST00000553998 KLF18A0A0U1RQI7 1052 aa8.82□□□□□ -1
ABCD4-220ENST00000553998 CCDC196A0A1B0GTZ2 297 aa8.82□□□□□ -1
ABCD4-220ENST00000553998 MEIS2O14770 477 aa8.82□□□□□ -1
ABCD4-220ENST00000553998 MAFGO15525 162 aa8.82□□□□□ -1
ABCD4-220ENST00000553998 ZBTB43O43298 467 aa8.82□□□□□ -1
ABCD4-220ENST00000553998 FGF18O76093 207 aa8.82□□□□□ -1
ABCD4-220ENST00000553998 CSPG5O95196 566 aa8.82□□□□□ -1
ABCD4-220ENST00000553998 SMARCA1P28370 1054 aa8.82□□□□□ -1
ABCD4-220ENST00000553998 SARSP49591 514 aaKnown RBP8.82□□□□□ -1
ABCD4-220ENST00000553998 CLCN5P51795 746 aa8.82□□□□□ -1
ABCD4-220ENST00000553998 NEK4P51957 841 aa8.82□□□□□ -1
ABCD4-220ENST00000553998 FAM189BP81408 668 aa8.82□□□□□ -1
ABCD4-220ENST00000553998 TOB2Q14106 344 aaPredicted RBP8.82□□□□□ -1
ABCD4-220ENST00000553998 NLRX1Q86UT6 975 aa8.82□□□□□ -1
ABCD4-220ENST00000553998 KREMEN2Q8NCW0 462 aa8.82□□□□□ -1
ABCD4-220ENST00000553998 MICAL1Q8TDZ2 1067 aa8.82□□□□□ -1
ABCD4-220ENST00000553998 TNPO1Q92973 898 aaKnown RBP8.82□□□□□ -1
ABCD4-220ENST00000553998 ZNF274Q96GC6 653 aaPredicted RBP8.82□□□□□ -1
ABCD4-220ENST00000553998 CDHR1Q96JP9 859 aa8.82□□□□□ -1
ABCD4-220ENST00000553998 CELF4Q9BZC1 486 aaKnown RBP8.82□□□□□ -1
ABCD4-220ENST00000553998 AAASQ9NRG9 546 aa8.82□□□□□ -1
ABCD4-220ENST00000553998 RBM28Q9NW13 759 aaKnown RBP8.82□□□□□ -1
ABCD4-220ENST00000553998 RNF216Q9NWF9 866 aaPredicted RBP8.82□□□□□ -1
ABCD4-220ENST00000553998 BRPF3Q9ULD4 1205 aa8.82□□□□□ -1
ABCD4-220ENST00000553998 SORCS3Q9UPU3 1222 aa8.82□□□□□ -1
ABCD4-220ENST00000553998 PCDHA2Q9Y5H9 948 aa8.82□□□□□ -1
ABCD4-220ENST00000553998 TRPV2Q9Y5S1 764 aa8.82□□□□□ -1
ABCD4-220ENST00000553998 KMT2EQ8IZD2 1858 aa8.81□□□□□ -1
ABCD4-220ENST00000553998 ZFHX4Q86UP3 3567 aa8.81□□□□□ -1
ABCD4-220ENST00000553998 GVINP1Q7Z2Y8 2422 aa8.81□□□□□ -1
ABCD4-220ENST00000553998 SMIM35A0A1B0GVV1 85 aa8.81□□□□□ -1
ABCD4-220ENST00000553998 GOLGA8BA8MQT2 603 aa8.81□□□□□ -1
ABCD4-220ENST00000553998 PPFIA3O75145 1194 aa8.81□□□□□ -1
ABCD4-220ENST00000553998 SRGAP2BP0DMP2 458 aa8.81□□□□□ -1
ABCD4-220ENST00000553998 INSRRP14616 1297 aa8.81□□□□□ -1
ABCD4-220ENST00000553998 ITGB5P18084 799 aa8.81□□□□□ -1
ABCD4-220ENST00000553998 ID4P47928 161 aa8.81□□□□□ -1
ABCD4-220ENST00000553998 GATMP50440 423 aa8.81□□□□□ -1
ABCD4-220ENST00000553998 PAK2Q13177 524 aa8.81□□□□□ -1
ABCD4-220ENST00000553998 MTMR3Q13615 1198 aa8.81□□□□□ -1
ABCD4-220ENST00000553998 PAN2Q504Q3 1202 aaKnown RBP8.81□□□□□ -1
ABCD4-220ENST00000553998 MCTP2Q6DN12 878 aa8.81□□□□□ -1
ABCD4-220ENST00000553998 ASTLQ6HA08 431 aaPredicted RBP8.81□□□□□ -1
ABCD4-220ENST00000553998 MICU3Q86XE3 530 aa8.81□□□□□ -1
ABCD4-220ENST00000553998 HOMER1Q86YM7 354 aa8.81□□□□□ -1
ABCD4-220ENST00000553998 FANCBQ8NB91 859 aa8.81□□□□□ -1
ABCD4-220ENST00000553998 NKD2Q969F2 451 aaPredicted RBP8.81□□□□□ -1
ABCD4-220ENST00000553998 NECTIN4Q96NY8 510 aa8.81□□□□□ -1
ABCD4-220ENST00000553998 PCYT2Q99447 389 aa8.81□□□□□ -1
ABCD4-220ENST00000553998 CWH43Q9H720 699 aa8.81□□□□□ -1
ABCD4-220ENST00000553998 NGRNQ9NPE2 291 aaKnown RBP8.81□□□□□ -1
ABCD4-220ENST00000553998 RGS18Q9NS28 235 aa8.81□□□□□ -1
ABCD4-220ENST00000553998 TYW1Q9NV66 732 aaKnown RBP8.81□□□□□ -1
ABCD4-220ENST00000553998 NR2E1Q9Y466 385 aa8.81□□□□□ -1
ABCD4-220ENST00000553998 PCDHB7Q9Y5E2 793 aa8.81□□□□□ -1
ABCD4-220ENST00000553998 NID2Q14112 1375 aa8.81□□□□□ -1
ABCD4-220ENST00000553998 ATG2AQ2TAZ0 1938 aa8.81□□□□□ -1
ABCD4-220ENST00000553998 NLRC5Q86WI3 1866 aa8.81□□□□□ -1
ABCD4-220ENST00000553998 WDR87Q6ZQQ6 2873 aa8.8□□□□□ -1
ABCD4-220ENST00000553998 KAT6AQ92794 2004 aa8.8□□□□□ -1
ABCD4-220ENST00000553998 GOLGA8AA7E2F4 631 aa8.8□□□□□ -1
ABCD4-220ENST00000553998 C9IYK1 514 aa8.8□□□□□ -1
ABCD4-220ENST00000553998 MGEA5O60502 916 aa8.8□□□□□ -1
ABCD4-220ENST00000553998 BRD1O95696 1058 aa8.8□□□□□ -1
ABCD4-220ENST00000553998 PDIA3P30101 505 aaKnown RBP8.8□□□□□ -1
ABCD4-220ENST00000553998 TECP42680 631 aa8.8□□□□□ -1
ABCD4-220ENST00000553998 MCM2P49736 904 aa8.8□□□□□ -1
ABCD4-220ENST00000553998 METAP2P50579 478 aaKnown RBP eCLIP8.8□□□□□ -1
ABCD4-220ENST00000553998 AK2P54819 239 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms