RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 ZNF484Q5JVG2 852 aa16.13■□□□□ 0.17
SHMT2-210ENST00000553950 GNASQ5JWF2 1037 aa16.13■□□□□ 0.17
SHMT2-210ENST00000553950 TMEM63BQ5T3F8 832 aa16.13■□□□□ 0.17
SHMT2-210ENST00000553950 TRIM50Q86XT4 487 aa16.13■□□□□ 0.17
SHMT2-210ENST00000553950 ARRDC4Q8NCT1 418 aa16.13■□□□□ 0.17
SHMT2-210ENST00000553950 PIGOQ8TEQ8 1089 aa16.13■□□□□ 0.17
SHMT2-210ENST00000553950 SLC7A3Q8WY07 619 aa16.13■□□□□ 0.17
SHMT2-210ENST00000553950 GSDMAQ96QA5 445 aa16.13■□□□□ 0.17
SHMT2-210ENST00000553950 C16orf70Q9BSU1 422 aa16.13■□□□□ 0.17
SHMT2-210ENST00000553950 TSEN34Q9BSV6 310 aaKnown RBP16.13■□□□□ 0.17
SHMT2-210ENST00000553950 MTG1Q9BT17 334 aaPredicted RBP16.13■□□□□ 0.17
SHMT2-210ENST00000553950 TRIM9Q9C026 710 aa16.13■□□□□ 0.17
SHMT2-210ENST00000553950 TUT1Q9H6E5 874 aaKnown RBP16.13■□□□□ 0.17
SHMT2-210ENST00000553950 PAK6Q9NQU5 681 aaPredicted RBP16.13■□□□□ 0.17
SHMT2-210ENST00000553950 CYP26B1Q9NR63 512 aa16.13■□□□□ 0.17
SHMT2-210ENST00000553950 CEP350Q5VT06 3117 aa16.12■□□□□ 0.17
SHMT2-210ENST00000553950 PVALEFA0A1B0GWK0 134 aa16.12■□□□□ 0.17
SHMT2-210ENST00000553950 MYL3P08590 195 aa16.12■□□□□ 0.17
SHMT2-210ENST00000553950 POLGP54098 1239 aaPredicted RBP16.12■□□□□ 0.17
SHMT2-210ENST00000553950 ASIC1P78348 528 aa16.12■□□□□ 0.17
SHMT2-210ENST00000553950 PURAQ00577 322 aaKnown RBP16.12■□□□□ 0.17
SHMT2-210ENST00000553950 PLCB4Q15147 1175 aa16.12■□□□□ 0.17
SHMT2-210ENST00000553950 ANO5Q75V66 913 aa16.12■□□□□ 0.17
SHMT2-210ENST00000553950 CCDC65Q8IXS2 484 aa16.12■□□□□ 0.17
SHMT2-210ENST00000553950 ARMC5Q96C12 935 aa16.12■□□□□ 0.17
SHMT2-210ENST00000553950 DRC1Q96MC2 740 aa16.12■□□□□ 0.17
SHMT2-210ENST00000553950 ATP6V0A4Q9HBG4 840 aa16.12■□□□□ 0.17
SHMT2-210ENST00000553950 KIAA1468Q9P260 1216 aa16.12■□□□□ 0.17
SHMT2-210ENST00000553950 SEL1LQ9UBV2 794 aa16.12■□□□□ 0.17
SHMT2-210ENST00000553950 RRN3P2A6NIE6 340 aa16.11■□□□□ 0.17
SHMT2-210ENST00000553950 KBTBD13C9JR72 458 aa16.11■□□□□ 0.17
SHMT2-210ENST00000553950 PGK1P00558 417 aa16.11■□□□□ 0.17
SHMT2-210ENST00000553950 GAP43P17677 238 aa16.11■□□□□ 0.17
SHMT2-210ENST00000553950 CYP11B2P19099 503 aa16.11■□□□□ 0.17
SHMT2-210ENST00000553950 MARK3P27448 753 aa16.11■□□□□ 0.17
SHMT2-210ENST00000553950 PPP1R2P41236 205 aa16.11■□□□□ 0.17
SHMT2-210ENST00000553950 PSMC6P62333 389 aa16.11■□□□□ 0.17
SHMT2-210ENST00000553950 DPYDQ12882 1025 aa16.11■□□□□ 0.17
SHMT2-210ENST00000553950 DHX8Q14562 1220 aaKnown RBP16.11■□□□□ 0.17
SHMT2-210ENST00000553950 KCNB1Q14721 858 aa16.11■□□□□ 0.17
SHMT2-210ENST00000553950 MFSD10Q14728 455 aa16.11■□□□□ 0.17
SHMT2-210ENST00000553950 CAMK4Q16566 473 aa16.11■□□□□ 0.17
SHMT2-210ENST00000553950 MTERF2Q49AM1 385 aa16.11■□□□□ 0.17
SHMT2-210ENST00000553950 NT5DC1Q5TFE4 455 aa16.11■□□□□ 0.17
SHMT2-210ENST00000553950 PLA2G4FQ68DD2 849 aa16.11■□□□□ 0.17
SHMT2-210ENST00000553950 RINT1Q6NUQ1 792 aa16.11■□□□□ 0.17
SHMT2-210ENST00000553950 PADI6Q6TGC4 694 aa16.11■□□□□ 0.17
SHMT2-210ENST00000553950 SASS6Q6UVJ0 657 aa16.11■□□□□ 0.17
SHMT2-210ENST00000553950 UNC13DQ70J99 1090 aa16.11■□□□□ 0.17
SHMT2-210ENST00000553950 SLC17A8Q8NDX2 589 aa16.11■□□□□ 0.17
SHMT2-210ENST00000553950 KLHDC9Q8NEP7 349 aa16.11■□□□□ 0.17
SHMT2-210ENST00000553950 DDX12PQ92771 950 aa16.11■□□□□ 0.17
SHMT2-210ENST00000553950 ZNF333Q96JL9 665 aa16.11■□□□□ 0.17
SHMT2-210ENST00000553950 SEZ6LQ9BYH1 1024 aa16.11■□□□□ 0.17
SHMT2-210ENST00000553950 EXOC1Q9NV70 894 aa16.11■□□□□ 0.17
SHMT2-210ENST00000553950 KCNG1Q9UIX4 513 aa16.11■□□□□ 0.17
SHMT2-210ENST00000553950 TELO2Q9Y4R8 837 aa16.11■□□□□ 0.17
SHMT2-210ENST00000553950 MYMKA6NI61 221 aa16.1■□□□□ 0.17
SHMT2-210ENST00000553950 MAGEB2O15479 319 aa16.1■□□□□ 0.17
SHMT2-210ENST00000553950 USO1O60763 962 aaKnown RBP16.1■□□□□ 0.17
SHMT2-210ENST00000553950 STBD1O95210 358 aa16.1■□□□□ 0.17
SHMT2-210ENST00000553950 RPLP2P05387 115 aaKnown RBP16.1■□□□□ 0.17
SHMT2-210ENST00000553950 CCDC192P0DO97 292 aa16.1■□□□□ 0.17
SHMT2-210ENST00000553950 GNAT1P11488 350 aa16.1■□□□□ 0.17
SHMT2-210ENST00000553950 CCL5P13501 91 aa16.1■□□□□ 0.17
SHMT2-210ENST00000553950 SCP2P22307 547 aa16.1■□□□□ 0.17
SHMT2-210ENST00000553950 ABCD1P33897 745 aa16.1■□□□□ 0.17
SHMT2-210ENST00000553950 PSEN2P49810 448 aa16.1■□□□□ 0.17
SHMT2-210ENST00000553950 MDM2Q00987 491 aaPredicted RBP16.1■□□□□ 0.17
SHMT2-210ENST00000553950 TBC1D8BQ0IIM8 1120 aa16.1■□□□□ 0.17
SHMT2-210ENST00000553950 PPFIA1Q13136 1202 aa16.1■□□□□ 0.17
SHMT2-210ENST00000553950 PNOCQ13519 176 aa16.1■□□□□ 0.17
SHMT2-210ENST00000553950 ZSCAN23Q3MJ62 389 aa16.1■□□□□ 0.17
SHMT2-210ENST00000553950 C1orf186Q6ZWK4 172 aa16.1■□□□□ 0.17
SHMT2-210ENST00000553950 RETREG2Q8NC44 543 aa16.1■□□□□ 0.17
SHMT2-210ENST00000553950 SPATA20Q8TB22 786 aa16.1■□□□□ 0.17
SHMT2-210ENST00000553950 LRRC15Q8TF66 581 aa16.1■□□□□ 0.17
SHMT2-210ENST00000553950 TCP11Q8WWU5 503 aa16.1■□□□□ 0.17
SHMT2-210ENST00000553950 KIFAP3Q92845 792 aa16.1■□□□□ 0.17
SHMT2-210ENST00000553950 MTRQ99707 1265 aa16.1■□□□□ 0.17
SHMT2-210ENST00000553950 RNF208Q9H0X6 261 aa16.1■□□□□ 0.17
SHMT2-210ENST00000553950 UNC93B1Q9H1C4 597 aa16.1■□□□□ 0.17
SHMT2-210ENST00000553950 C17orf75Q9HAS0 396 aa16.1■□□□□ 0.17
SHMT2-210ENST00000553950 DACH1Q9UI36 760 aa16.1■□□□□ 0.17
SHMT2-210ENST00000553950 TUBE1Q9UJT0 475 aa16.1■□□□□ 0.17
SHMT2-210ENST00000553950 COL4A3BPQ9Y5P4 624 aa16.1■□□□□ 0.17
SHMT2-210ENST00000553950 NRCAMQ92823 1304 aa16.1■□□□□ 0.17
SHMT2-210ENST00000553950 EVPLQ92817 2033 aa16.09■□□□□ 0.17
SHMT2-210ENST00000553950 HAS3O00219 553 aa16.09■□□□□ 0.17
SHMT2-210ENST00000553950 DNM1LO00429 736 aa16.09■□□□□ 0.17
SHMT2-210ENST00000553950 FAM13AO94988 1023 aa16.09■□□□□ 0.17
SHMT2-210ENST00000553950 RPN1P04843 607 aaKnown RBP16.09■□□□□ 0.17
SHMT2-210ENST00000553950 PRR29P0C7W0 189 aa16.09■□□□□ 0.17
SHMT2-210ENST00000553950 ATP4AP20648 1035 aa16.09■□□□□ 0.17
SHMT2-210ENST00000553950 BEX3Q00994 111 aa16.09■□□□□ 0.17
SHMT2-210ENST00000553950 CUL4BQ13620 913 aa16.09■□□□□ 0.17
SHMT2-210ENST00000553950 EMC2Q15006 297 aa16.09■□□□□ 0.17
SHMT2-210ENST00000553950 LRRC41Q15345 812 aa16.09■□□□□ 0.17
SHMT2-210ENST00000553950 TARBP2Q15633 366 aaKnown RBP16.09■□□□□ 0.17
SHMT2-210ENST00000553950 STX1AQ16623 288 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms