RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 RAET1EQ8TD07 263 aa13.07□□□□□ -0.32
NEK9-202ENST00000553823 GLG1Q92896 1179 aa13.07□□□□□ -0.32
NEK9-202ENST00000553823 GTPBP4Q9BZE4 634 aaKnown RBP13.07□□□□□ -0.32
NEK9-202ENST00000553823 NAT10Q9H0A0 1025 aaKnown RBP13.07□□□□□ -0.32
NEK9-202ENST00000553823 SMARCAD1Q9H4L7 1026 aa13.07□□□□□ -0.32
NEK9-202ENST00000553823 PANK4Q9NVE7 773 aa13.07□□□□□ -0.32
NEK9-202ENST00000553823 WBP1LQ9NX94 342 aa13.07□□□□□ -0.32
NEK9-202ENST00000553823 SEPT9Q9UHD8 586 aaPredicted RBP13.07□□□□□ -0.32
NEK9-202ENST00000553823 TSKSQ9UJT2 592 aa13.07□□□□□ -0.32
NEK9-202ENST00000553823 Q9Y3F1 56 aa13.07□□□□□ -0.32
NEK9-202ENST00000553823 FSD2A1L4K1 749 aa13.06□□□□□ -0.32
NEK9-202ENST00000553823 TMEM150BA6NC51 233 aa13.06□□□□□ -0.32
NEK9-202ENST00000553823 GOLGA6L3A6NEY3 463 aa13.06□□□□□ -0.32
NEK9-202ENST00000553823 DYNC1LI2O43237 492 aaPredicted RBP13.06□□□□□ -0.32
NEK9-202ENST00000553823 ADCY3O60266 1144 aa13.06□□□□□ -0.32
NEK9-202ENST00000553823 PPFIA4O75335 1185 aa13.06□□□□□ -0.32
NEK9-202ENST00000553823 ELNP15502 786 aa13.06□□□□□ -0.32
NEK9-202ENST00000553823 ATP4AP20648 1035 aa13.06□□□□□ -0.32
NEK9-202ENST00000553823 GUCY2CP25092 1073 aa13.06□□□□□ -0.32
NEK9-202ENST00000553823 SLC26A2P50443 739 aa13.06□□□□□ -0.32
NEK9-202ENST00000553823 NPEPPSP55786 919 aa13.06□□□□□ -0.32
NEK9-202ENST00000553823 RAD51AP2Q09MP3 1159 aa13.06□□□□□ -0.32
NEK9-202ENST00000553823 GIT2Q14161 759 aa13.06□□□□□ -0.32
NEK9-202ENST00000553823 PLA2G4FQ68DD2 849 aa13.06□□□□□ -0.32
NEK9-202ENST00000553823 C11orf57Q6ZUT1 292 aaPredicted RBP13.06□□□□□ -0.32
NEK9-202ENST00000553823 TLK2Q86UE8 772 aa13.06□□□□□ -0.32
NEK9-202ENST00000553823 TRPV1Q8NER1 839 aa13.06□□□□□ -0.32
NEK9-202ENST00000553823 SPDYE1Q8NFV5 336 aaPredicted RBP13.06□□□□□ -0.32
NEK9-202ENST00000553823 FAM200AQ8TCP9 573 aa13.06□□□□□ -0.32
NEK9-202ENST00000553823 FAM167AQ96KS9 214 aa13.06□□□□□ -0.32
NEK9-202ENST00000553823 REEP2Q9BRK0 252 aa13.06□□□□□ -0.32
NEK9-202ENST00000553823 AP5M1Q9H0R1 490 aa13.06□□□□□ -0.32
NEK9-202ENST00000553823 RBSNQ9H1K0 784 aa13.06□□□□□ -0.32
NEK9-202ENST00000553823 NRBP2Q9NSY0 501 aa13.06□□□□□ -0.32
NEK9-202ENST00000553823 DACH1Q9UI36 760 aa13.06□□□□□ -0.32
NEK9-202ENST00000553823 EVPLQ92817 2033 aa13.05□□□□□ -0.32
NEK9-202ENST00000553823 FRMD3A2A2Y4 597 aa13.05□□□□□ -0.32
NEK9-202ENST00000553823 USO1O60763 962 aaKnown RBP13.05□□□□□ -0.32
NEK9-202ENST00000553823 TBCAO75347 108 aaKnown RBP13.05□□□□□ -0.32
NEK9-202ENST00000553823 HMGCRP04035 888 aa13.05□□□□□ -0.32
NEK9-202ENST00000553823 LGALS2P05162 132 aa13.05□□□□□ -0.32
NEK9-202ENST00000553823 MMP3P08254 477 aa13.05□□□□□ -0.32
NEK9-202ENST00000553823 HOXD8P13378 290 aaPredicted RBP13.05□□□□□ -0.32
NEK9-202ENST00000553823 ZNF165P49910 485 aa13.05□□□□□ -0.32
NEK9-202ENST00000553823 CACNB2Q08289 660 aaPredicted RBP13.05□□□□□ -0.32
NEK9-202ENST00000553823 TRIM32Q13049 653 aa13.05□□□□□ -0.32
NEK9-202ENST00000553823 COASYQ13057 564 aa13.05□□□□□ -0.32
NEK9-202ENST00000553823 PSMD2Q13200 908 aa13.05□□□□□ -0.32
NEK9-202ENST00000553823 DGKDQ16760 1214 aa13.05□□□□□ -0.32
NEK9-202ENST00000553823 TRIM50Q86XT4 487 aa13.05□□□□□ -0.32
NEK9-202ENST00000553823 DNAJC5GQ8N7S2 189 aa13.05□□□□□ -0.32
NEK9-202ENST00000553823 RNF214Q8ND24 703 aa13.05□□□□□ -0.32
NEK9-202ENST00000553823 PXYLP1Q8TE99 480 aa13.05□□□□□ -0.32
NEK9-202ENST00000553823 CEP170P1Q96L14 293 aa13.05□□□□□ -0.32
NEK9-202ENST00000553823 TIPINQ9BVW5 301 aa13.05□□□□□ -0.32
NEK9-202ENST00000553823 NIFKQ9BYG3 293 aaKnown RBP13.05□□□□□ -0.32
NEK9-202ENST00000553823 CYP26B1Q9NR63 512 aa13.05□□□□□ -0.32
NEK9-202ENST00000553823 ODF2LQ9ULJ1 636 aa13.05□□□□□ -0.32
NEK9-202ENST00000553823 A6NJR5 290 aa13.04□□□□□ -0.32
NEK9-202ENST00000553823 SEPT4O43236 478 aa13.04□□□□□ -0.32
NEK9-202ENST00000553823 DUSP11O75319 330 aaKnown RBP13.04□□□□□ -0.32
NEK9-202ENST00000553823 FAM13AO94988 1023 aa13.04□□□□□ -0.32
NEK9-202ENST00000553823 PRKAR2AP13861 404 aaKnown RBP13.04□□□□□ -0.32
NEK9-202ENST00000553823 GAP43P17677 238 aa13.04□□□□□ -0.32
NEK9-202ENST00000553823 MARK3P27448 753 aa13.04□□□□□ -0.32
NEK9-202ENST00000553823 CNGA1P29973 690 aa13.04□□□□□ -0.32
NEK9-202ENST00000553823 EHHADHQ08426 723 aa13.04□□□□□ -0.32
NEK9-202ENST00000553823 MTERF2Q49AM1 385 aa13.04□□□□□ -0.32
NEK9-202ENST00000553823 BRDTQ58F21 947 aaPredicted RBP13.04□□□□□ -0.32
NEK9-202ENST00000553823 HERC4Q5GLZ8 1057 aaPredicted RBP13.04□□□□□ -0.32
NEK9-202ENST00000553823 CT47A1Q5JQC4 288 aaPredicted RBP13.04□□□□□ -0.32
NEK9-202ENST00000553823 ATP8B4Q8TF62 1192 aa13.04□□□□□ -0.32
NEK9-202ENST00000553823 BBXQ8WY36 941 aaPredicted RBP13.04□□□□□ -0.32
NEK9-202ENST00000553823 LENG1Q96BZ8 264 aaPredicted RBP13.04□□□□□ -0.32
NEK9-202ENST00000553823 BPIFA3Q9BQP9 254 aa13.04□□□□□ -0.32
NEK9-202ENST00000553823 SH2D3AQ9BRG2 576 aa13.04□□□□□ -0.32
NEK9-202ENST00000553823 ZHX3Q9H4I2 956 aa13.04□□□□□ -0.32
NEK9-202ENST00000553823 CBX8Q9HC52 389 aa13.04□□□□□ -0.32
NEK9-202ENST00000553823 ERAP1Q9NZ08 941 aa13.04□□□□□ -0.32
NEK9-202ENST00000553823 GDAQ9Y2T3 454 aa13.04□□□□□ -0.32
NEK9-202ENST00000553823 PPME1Q9Y570 386 aa13.04□□□□□ -0.32
NEK9-202ENST00000553823 TRIM17Q9Y577 477 aa13.04□□□□□ -0.32
NEK9-202ENST00000553823 COL4A3BPQ9Y5P4 624 aa13.04□□□□□ -0.32
NEK9-202ENST00000553823 RSPH10B2B2RC85 870 aa13.03□□□□□ -0.32
NEK9-202ENST00000553823 PPP1R3GB7ZBB8 358 aa13.03□□□□□ -0.32
NEK9-202ENST00000553823 HBP1O60381 514 aa13.03□□□□□ -0.32
NEK9-202ENST00000553823 HIP1RO75146 1068 aa13.03□□□□□ -0.32
NEK9-202ENST00000553823 DGAT1O75907 488 aa13.03□□□□□ -0.32
NEK9-202ENST00000553823 RSPH10BP0C881 870 aa13.03□□□□□ -0.32
NEK9-202ENST00000553823 PPP1R2P41236 205 aa13.03□□□□□ -0.32
NEK9-202ENST00000553823 CPT1AP50416 773 aa13.03□□□□□ -0.32
NEK9-202ENST00000553823 STK4Q13043 487 aa13.03□□□□□ -0.32
NEK9-202ENST00000553823 STIM1Q13586 685 aa13.03□□□□□ -0.32
NEK9-202ENST00000553823 PLCB4Q15147 1175 aa13.03□□□□□ -0.32
NEK9-202ENST00000553823 TARBP2Q15633 366 aaKnown RBP13.03□□□□□ -0.32
NEK9-202ENST00000553823 FAM26FQ5R3K3 315 aa13.03□□□□□ -0.32
NEK9-202ENST00000553823 MAP3K21Q5TCX8 1036 aa13.03□□□□□ -0.32
NEK9-202ENST00000553823 SMYD4Q8IYR2 804 aaPredicted RBP13.03□□□□□ -0.32
NEK9-202ENST00000553823 SLAIN1Q8ND83 568 aa13.03□□□□□ -0.32
NEK9-202ENST00000553823 C16orf70Q9BSU1 422 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms