RNA–Protein interactions for RNA: ENST00000553660.5

CNIH1-203, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

TSL 2 BASIC

Gene CNIH1, Length 785 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-203ENST00000553660 NAP1L2Q9ULW6 460 aaPredicted RBP12.17□□□□□ -0.46
CNIH1-203ENST00000553660 ATP9BO43861 1147 aa12.16□□□□□ -0.46
CNIH1-203ENST00000553660 CDKL5O76039 1030 aa12.16□□□□□ -0.46
CNIH1-203ENST00000553660 DEXIO95424 95 aa12.16□□□□□ -0.46
CNIH1-203ENST00000553660 ITGB5P18084 799 aa12.16□□□□□ -0.46
CNIH1-203ENST00000553660 ITGB8P26012 769 aa12.16□□□□□ -0.46
CNIH1-203ENST00000553660 EML3Q32P44 896 aa12.16□□□□□ -0.46
CNIH1-203ENST00000553660 HSDL1Q3SXM5 330 aa12.16□□□□□ -0.46
CNIH1-203ENST00000553660 GALNT17Q6IS24 598 aa12.16□□□□□ -0.46
CNIH1-203ENST00000553660 CRYGNQ8WXF5 182 aa12.16□□□□□ -0.46
CNIH1-203ENST00000553660 BADQ92934 168 aa12.16□□□□□ -0.46
CNIH1-203ENST00000553660 SPATA33Q96N06 139 aa12.16□□□□□ -0.46
CNIH1-203ENST00000553660 MLXIPQ9HAP2 919 aa12.16□□□□□ -0.46
CNIH1-203ENST00000553660 LTBP2Q14767 1821 aa12.16□□□□□ -0.46
CNIH1-203ENST00000553660 CPLX1O14810 134 aa12.15□□□□□ -0.46
CNIH1-203ENST00000553660 B4GALT4O60513 344 aa12.15□□□□□ -0.46
CNIH1-203ENST00000553660 PFKFB2O60825 505 aa12.15□□□□□ -0.46
CNIH1-203ENST00000553660 CYP3A4P08684 503 aa12.15□□□□□ -0.46
CNIH1-203ENST00000553660 KCNA2P16389 499 aa12.15□□□□□ -0.46
CNIH1-203ENST00000553660 PSMC6P62333 389 aa12.15□□□□□ -0.46
CNIH1-203ENST00000553660 FPGSQ05932 587 aa12.15□□□□□ -0.46
CNIH1-203ENST00000553660 RBL2Q08999 1139 aa12.15□□□□□ -0.46
CNIH1-203ENST00000553660 PPIGQ13427 754 aaKnown RBP eCLIP12.15□□□□□ -0.46
CNIH1-203ENST00000553660 MTMR1Q13613 665 aa12.15□□□□□ -0.46
CNIH1-203ENST00000553660 UBE2SQ16763 222 aa12.15□□□□□ -0.46
CNIH1-203ENST00000553660 CEP55Q53EZ4 464 aa12.15□□□□□ -0.46
CNIH1-203ENST00000553660 TMEM199Q8N511 208 aa12.15□□□□□ -0.46
CNIH1-203ENST00000553660 MXRA8Q9BRK3 442 aa12.15□□□□□ -0.46
CNIH1-203ENST00000553660 NOC4LQ9BVI4 516 aaKnown RBP12.15□□□□□ -0.46
CNIH1-203ENST00000553660 ANO3Q9BYT9 981 aa12.15□□□□□ -0.46
CNIH1-203ENST00000553660 C22orf23Q9BZE7 217 aa12.15□□□□□ -0.46
CNIH1-203ENST00000553660 HIPK3Q9H422 1215 aa12.15□□□□□ -0.46
CNIH1-203ENST00000553660 ZNF395Q9H8N7 513 aaPredicted RBP12.15□□□□□ -0.46
CNIH1-203ENST00000553660 STK36Q9NRP7 1315 aa12.14□□□□□ -0.47
CNIH1-203ENST00000553660 MEIS1O00470 390 aa12.14□□□□□ -0.47
CNIH1-203ENST00000553660 PFKMP08237 780 aa12.14□□□□□ -0.47
CNIH1-203ENST00000553660 SNRPBP14678 240 aaKnown RBP12.14□□□□□ -0.47
CNIH1-203ENST00000553660 HOXC8P31273 242 aa12.14□□□□□ -0.47
CNIH1-203ENST00000553660 CCT2P78371 535 aaKnown RBP12.14□□□□□ -0.47
CNIH1-203ENST00000553660 SSRP1Q08945 709 aaKnown RBP12.14□□□□□ -0.47
CNIH1-203ENST00000553660 NCOA4Q13772 614 aa12.14□□□□□ -0.47
CNIH1-203ENST00000553660 C8orf34Q49A92 452 aa12.14□□□□□ -0.47
CNIH1-203ENST00000553660 REXO1Q8N1G1 1221 aaKnown RBP12.14□□□□□ -0.47
CNIH1-203ENST00000553660 PHKBQ93100 1093 aa12.14□□□□□ -0.47
CNIH1-203ENST00000553660 GPR20Q99678 358 aa12.14□□□□□ -0.47
CNIH1-203ENST00000553660 C16orf70Q9BSU1 422 aa12.14□□□□□ -0.47
CNIH1-203ENST00000553660 SLC26A6Q9BXS9 759 aa12.14□□□□□ -0.47
CNIH1-203ENST00000553660 TRPV6Q9H1D0 765 aa12.14□□□□□ -0.47
CNIH1-203ENST00000553660 NCOA5Q9HCD5 579 aaKnown RBP12.14□□□□□ -0.47
CNIH1-203ENST00000553660 RTEL1Q9NZ71 1219 aa12.14□□□□□ -0.47
CNIH1-203ENST00000553660 GTF2IRD1Q9UHL9 959 aa12.14□□□□□ -0.47
CNIH1-203ENST00000553660 SZT2Q5T011 3432 aa12.14□□□□□ -0.47
CNIH1-203ENST00000553660 NFASCO94856 1347 aa12.13□□□□□ -0.47
CNIH1-203ENST00000553660 NOP56O00567 594 aaKnown RBP12.13□□□□□ -0.47
CNIH1-203ENST00000553660 PARNO95453 639 aaKnown RBP12.13□□□□□ -0.47
CNIH1-203ENST00000553660 CIITAP33076 1130 aa12.13□□□□□ -0.47
CNIH1-203ENST00000553660 RFC2P35250 354 aa12.13□□□□□ -0.47
CNIH1-203ENST00000553660 ARHGAP4P98171 946 aa12.13□□□□□ -0.47
CNIH1-203ENST00000553660 PSRC1Q6PGN9 363 aaPredicted RBP12.13□□□□□ -0.47
CNIH1-203ENST00000553660 CYFIP1Q7L576 1253 aa12.13□□□□□ -0.47
CNIH1-203ENST00000553660 DEPDC4Q8N2C3 294 aa12.13□□□□□ -0.47
CNIH1-203ENST00000553660 DAGLBQ8NCG7 672 aa12.13□□□□□ -0.47
CNIH1-203ENST00000553660 CAGE1Q8TC20 777 aa12.13□□□□□ -0.47
CNIH1-203ENST00000553660 SLKQ9H2G2 1235 aaPredicted RBP12.13□□□□□ -0.47
CNIH1-203ENST00000553660 KCNH7Q9NS40 1196 aa12.13□□□□□ -0.47
CNIH1-203ENST00000553660 TFIP11Q9UBB9 837 aaKnown RBP12.13□□□□□ -0.47
CNIH1-203ENST00000553660 TPCN1Q9ULQ1 816 aa12.13□□□□□ -0.47
CNIH1-203ENST00000553660 H3BRB1 525 aa12.12□□□□□ -0.47
CNIH1-203ENST00000553660 ATP9AO75110 1047 aa12.12□□□□□ -0.47
CNIH1-203ENST00000553660 USP11P51784 963 aa12.12□□□□□ -0.47
CNIH1-203ENST00000553660 AK2P54819 239 aa12.12□□□□□ -0.47
CNIH1-203ENST00000553660 SETQ01105 290 aaPredicted RBP12.12□□□□□ -0.47
CNIH1-203ENST00000553660 SCRN1Q12765 414 aa12.12□□□□□ -0.47
CNIH1-203ENST00000553660 BFSP2Q13515 415 aa12.12□□□□□ -0.47
CNIH1-203ENST00000553660 KIAA0753Q2KHM9 967 aa12.12□□□□□ -0.47
CNIH1-203ENST00000553660 FAM47CQ5HY64 1035 aa12.12□□□□□ -0.47
CNIH1-203ENST00000553660 RASIP1Q5U651 963 aa12.12□□□□□ -0.47
CNIH1-203ENST00000553660 FAM109BQ6ICB4 259 aaPredicted RBP12.12□□□□□ -0.47
CNIH1-203ENST00000553660 RPUSD2Q8IZ73 545 aaKnown RBP12.12□□□□□ -0.47
CNIH1-203ENST00000553660 CCDC155Q8N6L0 562 aa12.12□□□□□ -0.47
CNIH1-203ENST00000553660 C7orf31Q8N865 590 aa12.12□□□□□ -0.47
CNIH1-203ENST00000553660 SEPT1Q8WYJ6 367 aa12.12□□□□□ -0.47
CNIH1-203ENST00000553660 INSM2Q96T92 566 aaPredicted RBP12.12□□□□□ -0.47
CNIH1-203ENST00000553660 PPP1R12CQ9BZL4 782 aa12.12□□□□□ -0.47
CNIH1-203ENST00000553660 TUT1Q9H6E5 874 aaKnown RBP12.12□□□□□ -0.47
CNIH1-203ENST00000553660 IL23AQ9NPF7 189 aa12.12□□□□□ -0.47
CNIH1-203ENST00000553660 TRMT13Q9NUP7 481 aaKnown RBP12.12□□□□□ -0.47
CNIH1-203ENST00000553660 ZNF215Q9UL58 517 aaPredicted RBP12.12□□□□□ -0.47
CNIH1-203ENST00000553660 PCDHA4Q9UN74 947 aa12.12□□□□□ -0.47
CNIH1-203ENST00000553660 NOD1Q9Y239 953 aa12.12□□□□□ -0.47
CNIH1-203ENST00000553660 LGALS2P05162 132 aa12.11□□□□□ -0.47
CNIH1-203ENST00000553660 RBM25P49756 843 aaKnown RBP12.11□□□□□ -0.47
CNIH1-203ENST00000553660 NEK4P51957 841 aa12.11□□□□□ -0.47
CNIH1-203ENST00000553660 SMAD3P84022 425 aaKnown RBP12.11□□□□□ -0.47
CNIH1-203ENST00000553660 PTK7Q13308 1070 aa12.11□□□□□ -0.47
CNIH1-203ENST00000553660 SHHQ15465 462 aa12.11□□□□□ -0.47
CNIH1-203ENST00000553660 PTGISQ16647 500 aa12.11□□□□□ -0.47
CNIH1-203ENST00000553660 AFAP1L1Q8TED9 768 aa12.11□□□□□ -0.47
CNIH1-203ENST00000553660 WASF1Q92558 559 aa12.11□□□□□ -0.47
CNIH1-203ENST00000553660 TNPO1Q92973 898 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms