RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 SEC63Q9UGP8 760 aaKnown RBP18.06■□□□□ 0.48
ACTN1-209ENST00000553659 TTC3P53804 2025 aa18.06■□□□□ 0.48
ACTN1-209ENST00000553659 MYO7AQ13402 2215 aa18.06■□□□□ 0.48
ACTN1-209ENST00000553659 A0A1W2PQ27 194 aa18.05■□□□□ 0.48
ACTN1-209ENST00000553659 A0A1W2PQ64 194 aa18.05■□□□□ 0.48
ACTN1-209ENST00000553659 A0A1W2PQD8 194 aa18.05■□□□□ 0.48
ACTN1-209ENST00000553659 PRPF3O43395 683 aaKnown RBP18.05■□□□□ 0.48
ACTN1-209ENST00000553659 U2AF2P26368 475 aaKnown RBP eCLIP18.05■□□□□ 0.48
ACTN1-209ENST00000553659 TCF7P36402 384 aaPredicted RBP18.05■□□□□ 0.48
ACTN1-209ENST00000553659 STK38Q15208 465 aa18.05■□□□□ 0.48
ACTN1-209ENST00000553659 UVSSAQ2YD98 709 aa18.05■□□□□ 0.48
ACTN1-209ENST00000553659 TAF2Q6P1X5 1199 aa18.05■□□□□ 0.48
ACTN1-209ENST00000553659 FAM177A1Q8N128 213 aaPredicted RBP18.05■□□□□ 0.48
ACTN1-209ENST00000553659 PHKBQ93100 1093 aa18.05■□□□□ 0.48
ACTN1-209ENST00000553659 GPRASP2Q96D09 838 aa18.05■□□□□ 0.48
ACTN1-209ENST00000553659 FOXP1Q9H334 677 aaPredicted RBP18.05■□□□□ 0.48
ACTN1-209ENST00000553659 EHMT1Q9H9B1 1298 aa18.05■□□□□ 0.48
ACTN1-209ENST00000553659 ATP9AO75110 1047 aa18.04■□□□□ 0.48
ACTN1-209ENST00000553659 SF3A1Q15459 793 aaKnown RBP18.04■□□□□ 0.48
ACTN1-209ENST00000553659 TCEAL5Q5H9L2 206 aa18.04■□□□□ 0.48
ACTN1-209ENST00000553659 CCDC73Q6ZRK6 1079 aa18.04■□□□□ 0.48
ACTN1-209ENST00000553659 SEPT1Q8WYJ6 367 aa18.04■□□□□ 0.48
ACTN1-209ENST00000553659 PABPC5Q96DU9 382 aaKnown RBP18.04■□□□□ 0.48
ACTN1-209ENST00000553659 CDHR1Q96JP9 859 aa18.04■□□□□ 0.48
ACTN1-209ENST00000553659 NSUN3Q9H649 340 aaKnown RBP18.04■□□□□ 0.48
ACTN1-209ENST00000553659 PSTPIP2Q9H939 334 aa18.04■□□□□ 0.48
ACTN1-209ENST00000553659 GSTTP1A0A1W2PQM5 241 aa18.03■□□□□ 0.48
ACTN1-209ENST00000553659 FAM86C2PA6NEL3 165 aa18.03■□□□□ 0.48
ACTN1-209ENST00000553659 C5orf67F2Z3F1 127 aa18.03■□□□□ 0.48
ACTN1-209ENST00000553659 MMP1P03956 469 aa18.03■□□□□ 0.48
ACTN1-209ENST00000553659 RB1P06400 928 aa18.03■□□□□ 0.48
ACTN1-209ENST00000553659 CCDC192P0DO97 292 aa18.03■□□□□ 0.48
ACTN1-209ENST00000553659 KCNA2P16389 499 aa18.03■□□□□ 0.48
ACTN1-209ENST00000553659 SSTR3P32745 418 aaPredicted RBP18.03■□□□□ 0.48
ACTN1-209ENST00000553659 COL19A1Q14993 1142 aa18.03■□□□□ 0.48
ACTN1-209ENST00000553659 ADALQ6DHV7 355 aa18.03■□□□□ 0.48
ACTN1-209ENST00000553659 RUFY4Q6ZNE9 571 aa18.03■□□□□ 0.48
ACTN1-209ENST00000553659 TMTC3Q6ZXV5 915 aa18.03■□□□□ 0.48
ACTN1-209ENST00000553659 RSPH3Q86UC2 560 aa18.03■□□□□ 0.48
ACTN1-209ENST00000553659 FIBCD1Q8N539 461 aa18.03■□□□□ 0.48
ACTN1-209ENST00000553659 SRBD1Q8N5C6 995 aaKnown RBP18.03■□□□□ 0.48
ACTN1-209ENST00000553659 LINC00301Q8NCQ3 95 aa18.03■□□□□ 0.48
ACTN1-209ENST00000553659 CLSTN2Q9H4D0 955 aa18.03■□□□□ 0.48
ACTN1-209ENST00000553659 BRMS1Q9HCU9 246 aa18.03■□□□□ 0.48
ACTN1-209ENST00000553659 ERAP1Q9NZ08 941 aa18.03■□□□□ 0.48
ACTN1-209ENST00000553659 H3BQ06 376 aaPredicted RBP18.02■□□□□ 0.48
ACTN1-209ENST00000553659 CAVIN2O95810 425 aa18.02■□□□□ 0.48
ACTN1-209ENST00000553659 GHRP10912 638 aa18.02■□□□□ 0.48
ACTN1-209ENST00000553659 ITGB5P18084 799 aa18.02■□□□□ 0.48
ACTN1-209ENST00000553659 HOXD11P31277 338 aaPredicted RBP18.02■□□□□ 0.48
ACTN1-209ENST00000553659 MGAT3Q09327 533 aa18.02■□□□□ 0.48
ACTN1-209ENST00000553659 PPFIA1Q13136 1202 aa18.02■□□□□ 0.48
ACTN1-209ENST00000553659 PGBD1Q96JS3 809 aa18.02■□□□□ 0.48
ACTN1-209ENST00000553659 RBSNQ9H1K0 784 aa18.02■□□□□ 0.48
ACTN1-209ENST00000553659 TNMDQ9H2S6 317 aa18.02■□□□□ 0.48
ACTN1-209ENST00000553659 SMARCAD1Q9H4L7 1026 aa18.02■□□□□ 0.48
ACTN1-209ENST00000553659 RWDD3Q9Y3V2 267 aa18.02■□□□□ 0.48
ACTN1-209ENST00000553659 UBIAD1Q9Y5Z9 338 aa18.02■□□□□ 0.48
ACTN1-209ENST00000553659 MBLAC1A4D2B0 266 aaPredicted RBP18.01■□□□□ 0.47
ACTN1-209ENST00000553659 ENPP3O14638 875 aa18.01■□□□□ 0.47
ACTN1-209ENST00000553659 SPTLC2O15270 562 aa18.01■□□□□ 0.47
ACTN1-209ENST00000553659 MAFGO15525 162 aa18.01■□□□□ 0.47
ACTN1-209ENST00000553659 NCK2O43639 380 aa18.01■□□□□ 0.47
ACTN1-209ENST00000553659 PPP6R2O75170 966 aa18.01■□□□□ 0.47
ACTN1-209ENST00000553659 PLEKHA8P1O95397 391 aa18.01■□□□□ 0.47
ACTN1-209ENST00000553659 ALADP13716 330 aa18.01■□□□□ 0.47
ACTN1-209ENST00000553659 CTNNB1P35222 781 aa18.01■□□□□ 0.47
ACTN1-209ENST00000553659 BMPR1AP36894 532 aa18.01■□□□□ 0.47
ACTN1-209ENST00000553659 ME1P48163 572 aa18.01■□□□□ 0.47
ACTN1-209ENST00000553659 LPIN1Q14693 890 aa18.01■□□□□ 0.47
ACTN1-209ENST00000553659 GRIK4Q16099 956 aa18.01■□□□□ 0.47
ACTN1-209ENST00000553659 RILPL1Q5EBL4 403 aa18.01■□□□□ 0.47
ACTN1-209ENST00000553659 RBM43Q6ZSC3 357 aaKnown RBP18.01■□□□□ 0.47
ACTN1-209ENST00000553659 MRPS27Q92552 414 aaKnown RBP18.01■□□□□ 0.47
ACTN1-209ENST00000553659 GLG1Q92896 1179 aa18.01■□□□□ 0.47
ACTN1-209ENST00000553659 LMAN2LQ9H0V9 348 aa18.01■□□□□ 0.47
ACTN1-209ENST00000553659 DACT1Q9NYF0 836 aa18.01■□□□□ 0.47
ACTN1-209ENST00000553659 TUBE1Q9UJT0 475 aa18.01■□□□□ 0.47
ACTN1-209ENST00000553659 FAM50BQ9Y247 325 aa18.01■□□□□ 0.47
ACTN1-209ENST00000553659 MORC2Q9Y6X9 1032 aaPredicted RBP18.01■□□□□ 0.47
ACTN1-209ENST00000553659 MYH15Q9Y2K3 1946 aa18■□□□□ 0.47
ACTN1-209ENST00000553659 PRR33A8MZF0 331 aa18■□□□□ 0.47
ACTN1-209ENST00000553659 PPFIA3O75145 1194 aa18■□□□□ 0.47
ACTN1-209ENST00000553659 LINC00271P0C7V0 271 aa18■□□□□ 0.47
ACTN1-209ENST00000553659 MARK3P27448 753 aa18■□□□□ 0.47
ACTN1-209ENST00000553659 FAM160A1Q05DH4 1040 aa18■□□□□ 0.47
ACTN1-209ENST00000553659 MTMR1Q13613 665 aa18■□□□□ 0.47
ACTN1-209ENST00000553659 MARCH8Q5T0T0 291 aa18■□□□□ 0.47
ACTN1-209ENST00000553659 EP400NLQ6ZTU2 488 aa18■□□□□ 0.47
ACTN1-209ENST00000553659 NOSTRINQ8IVI9 506 aa18■□□□□ 0.47
ACTN1-209ENST00000553659 CMTR1Q8N1G2 835 aaKnown RBP18■□□□□ 0.47
ACTN1-209ENST00000553659 DNAJB3Q8WWF6 145 aa18■□□□□ 0.47
ACTN1-209ENST00000553659 CLP1Q92989 425 aaKnown RBP18■□□□□ 0.47
ACTN1-209ENST00000553659 C11orf84Q9BUA3 381 aaPredicted RBP18■□□□□ 0.47
ACTN1-209ENST00000553659 RC3H2Q9HBD1 1191 aaKnown RBP18■□□□□ 0.47
ACTN1-209ENST00000553659 JADE2Q9NQC1 790 aa18■□□□□ 0.47
ACTN1-209ENST00000553659 CEP131Q9UPN4 1083 aa18■□□□□ 0.47
ACTN1-209ENST00000553659 ADGRA3Q8IWK6 1321 aa17.99■□□□□ 0.47
ACTN1-209ENST00000553659 SPDYE3A6NKU9 549 aa17.99■□□□□ 0.47
ACTN1-209ENST00000553659 KINO60870 393 aaKnown RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms