RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 BCL7CQ8WUZ0 217 aaPredicted RBP4.96□□□□□ -1.62
TDP1-207ENST00000553617 HPS3Q969F9 1004 aa4.96□□□□□ -1.62
TDP1-207ENST00000553617 TTC17Q96AE7 1141 aa4.96□□□□□ -1.62
TDP1-207ENST00000553617 EAF2Q96CJ1 260 aaPredicted RBP4.96□□□□□ -1.62
TDP1-207ENST00000553617 IL17RAQ96F46 866 aa4.96□□□□□ -1.62
TDP1-207ENST00000553617 GTPBP4Q9BZE4 634 aaKnown RBP4.96□□□□□ -1.62
TDP1-207ENST00000553617 QRSL1Q9H0R6 528 aaKnown RBP4.96□□□□□ -1.62
TDP1-207ENST00000553617 WNT8AQ9H1J5 351 aa4.96□□□□□ -1.62
TDP1-207ENST00000553617 MAN1C1Q9NR34 630 aa4.96□□□□□ -1.62
TDP1-207ENST00000553617 RIC8BQ9NVN3 520 aa4.96□□□□□ -1.62
TDP1-207ENST00000553617 SLAMF8Q9P0V8 285 aa4.96□□□□□ -1.62
TDP1-207ENST00000553617 USP25Q9UHP3 1055 aa4.96□□□□□ -1.62
TDP1-207ENST00000553617 SERPINB13Q9UIV8 391 aa4.96□□□□□ -1.62
TDP1-207ENST00000553617 TMPRSS11EQ9UL52 423 aa4.96□□□□□ -1.62
TDP1-207ENST00000553617 DNM3Q9UQ16 869 aa4.96□□□□□ -1.62
TDP1-207ENST00000553617 PCDHB4Q9Y5E5 795 aa4.96□□□□□ -1.62
TDP1-207ENST00000553617 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.95□□□□□ -1.62
TDP1-207ENST00000553617 PRSS38A1L453 326 aa4.95□□□□□ -1.62
TDP1-207ENST00000553617 PRAMEF25A6NGN4 478 aa4.95□□□□□ -1.62
TDP1-207ENST00000553617 GOLGA6L22H0YM25 854 aa4.95□□□□□ -1.62
TDP1-207ENST00000553617 APAF1O14727 1248 aa4.95□□□□□ -1.62
TDP1-207ENST00000553617 SRGAP3O43295 1099 aa4.95□□□□□ -1.62
TDP1-207ENST00000553617 AP1G1O43747 822 aa4.95□□□□□ -1.62
TDP1-207ENST00000553617 CREB3O43889 395 aa4.95□□□□□ -1.62
TDP1-207ENST00000553617 NDUFS2O75306 463 aa4.95□□□□□ -1.62
TDP1-207ENST00000553617 TGFB1P01137 390 aa4.95□□□□□ -1.62
TDP1-207ENST00000553617 MMEP08473 750 aa4.95□□□□□ -1.62
TDP1-207ENST00000553617 CLEC2LP0C7M8 214 aa4.95□□□□□ -1.62
TDP1-207ENST00000553617 PRKCAP17252 672 aa4.95□□□□□ -1.62
TDP1-207ENST00000553617 NEK3P51956 506 aa4.95□□□□□ -1.62
TDP1-207ENST00000553617 BNIP3Q12983 259 aa4.95□□□□□ -1.62
TDP1-207ENST00000553617 SAFBQ15424 915 aaKnown RBP eCLIP4.95□□□□□ -1.62
TDP1-207ENST00000553617 UGT8Q16880 541 aa4.95□□□□□ -1.62
TDP1-207ENST00000553617 COBLL1Q53SF7 1204 aa4.95□□□□□ -1.62
TDP1-207ENST00000553617 CATIPQ7Z7H3 387 aa4.95□□□□□ -1.62
TDP1-207ENST00000553617 CILP2Q8IUL8 1156 aa4.95□□□□□ -1.62
TDP1-207ENST00000553617 LYSMD2Q8IV50 215 aa4.95□□□□□ -1.62
TDP1-207ENST00000553617 TRIM48Q8IWZ4 208 aa4.95□□□□□ -1.62
TDP1-207ENST00000553617 SPICE1Q8N0Z3 855 aa4.95□□□□□ -1.62
TDP1-207ENST00000553617 STK11IPQ8N1F8 1099 aa4.95□□□□□ -1.62
TDP1-207ENST00000553617 MIER2Q8N344 545 aa4.95□□□□□ -1.62
TDP1-207ENST00000553617 PRR18Q8N4B5 295 aa4.95□□□□□ -1.62
TDP1-207ENST00000553617 C7orf31Q8N865 590 aa4.95□□□□□ -1.62
TDP1-207ENST00000553617 DIS3LQ8TF46 1054 aaKnown RBP4.95□□□□□ -1.62
TDP1-207ENST00000553617 MAML3Q96JK9 1138 aa4.95□□□□□ -1.62
TDP1-207ENST00000553617 STRBPQ96SI9 672 aaKnown RBP4.95□□□□□ -1.62
TDP1-207ENST00000553617 ANO3Q9BYT9 981 aa4.95□□□□□ -1.62
TDP1-207ENST00000553617 POFUT1Q9H488 388 aa4.95□□□□□ -1.62
TDP1-207ENST00000553617 PRDM12Q9H4Q4 367 aa4.95□□□□□ -1.62
TDP1-207ENST00000553617 BTBD7Q9P203 1132 aa4.95□□□□□ -1.62
TDP1-207ENST00000553617 SAP30BPQ9UHR5 308 aaKnown RBP4.95□□□□□ -1.62
TDP1-207ENST00000553617 ASB1Q9Y576 335 aa4.95□□□□□ -1.62
TDP1-207ENST00000553617 A0A1W2PQ27 194 aa4.94□□□□□ -1.62
TDP1-207ENST00000553617 A0A1W2PQ64 194 aa4.94□□□□□ -1.62
TDP1-207ENST00000553617 A0A1W2PQC6 194 aa4.94□□□□□ -1.62
TDP1-207ENST00000553617 A0A1W2PQD8 194 aa4.94□□□□□ -1.62
TDP1-207ENST00000553617 UBA6A0AVT1 1052 aaPredicted RBP4.94□□□□□ -1.62
TDP1-207ENST00000553617 FITM1A5D6W6 292 aa4.94□□□□□ -1.62
TDP1-207ENST00000553617 PRLP01236 227 aa4.94□□□□□ -1.62
TDP1-207ENST00000553617 PRNPP04156 253 aa4.94□□□□□ -1.62
TDP1-207ENST00000553617 HRGP04196 525 aa4.94□□□□□ -1.62
TDP1-207ENST00000553617 NBPF7P0C2Y1 421 aaPredicted RBP4.94□□□□□ -1.62
TDP1-207ENST00000553617 CD8BP10966 210 aa4.94□□□□□ -1.62
TDP1-207ENST00000553617 MTHFD2P13995 350 aa4.94□□□□□ -1.62
TDP1-207ENST00000553617 FAHP16930 419 aa4.94□□□□□ -1.62
TDP1-207ENST00000553617 RHCEP18577 417 aa4.94□□□□□ -1.62
TDP1-207ENST00000553617 FUT4P22083 530 aa4.94□□□□□ -1.62
TDP1-207ENST00000553617 AOAHP28039 575 aa4.94□□□□□ -1.62
TDP1-207ENST00000553617 THBS2P35442 1172 aa4.94□□□□□ -1.62
TDP1-207ENST00000553617 FXR1P51114 621 aaKnown RBP eCLIP4.94□□□□□ -1.62
TDP1-207ENST00000553617 ZNF280AP59817 542 aaPredicted RBP4.94□□□□□ -1.62
TDP1-207ENST00000553617 RHDQ02161 417 aa4.94□□□□□ -1.62
TDP1-207ENST00000553617 ZP2Q05996 745 aa4.94□□□□□ -1.62
TDP1-207ENST00000553617 PICALMQ13492 652 aa4.94□□□□□ -1.62
TDP1-207ENST00000553617 MYBPC3Q14896 1274 aa4.94□□□□□ -1.62
TDP1-207ENST00000553617 SLC14A2Q15849 920 aa4.94□□□□□ -1.62
TDP1-207ENST00000553617 MUM1Q2TAK8 710 aa4.94□□□□□ -1.62
TDP1-207ENST00000553617 C4orf46Q504U0 113 aa4.94□□□□□ -1.62
TDP1-207ENST00000553617 CCDC62Q6P9F0 684 aa4.94□□□□□ -1.62
TDP1-207ENST00000553617 KANSL1Q7Z3B3 1105 aa4.94□□□□□ -1.62
TDP1-207ENST00000553617 SPRED2Q7Z698 418 aa4.94□□□□□ -1.62
TDP1-207ENST00000553617 NLRX1Q86UT6 975 aa4.94□□□□□ -1.62
TDP1-207ENST00000553617 CABP7Q86V35 215 aa4.94□□□□□ -1.62
TDP1-207ENST00000553617 SPPL2CQ8IUH8 684 aa4.94□□□□□ -1.62
TDP1-207ENST00000553617 SLC41A1Q8IVJ1 513 aa4.94□□□□□ -1.62
TDP1-207ENST00000553617 SIRT2Q8IXJ6 389 aa4.94□□□□□ -1.62
TDP1-207ENST00000553617 COA7Q96BR5 231 aa4.94□□□□□ -1.62
TDP1-207ENST00000553617 RAX2Q96IS3 184 aa4.94□□□□□ -1.62
TDP1-207ENST00000553617 GBP4Q96PP9 640 aa4.94□□□□□ -1.62
TDP1-207ENST00000553617 FAM193BQ96PV7 902 aaPredicted RBP4.94□□□□□ -1.62
TDP1-207ENST00000553617 ACO2Q99798 780 aaKnown RBP4.94□□□□□ -1.62
TDP1-207ENST00000553617 ARPC5LQ9BPX5 153 aa4.94□□□□□ -1.62
TDP1-207ENST00000553617 KRTAP4-12Q9BQ66 201 aa4.94□□□□□ -1.62
TDP1-207ENST00000553617 RNF38Q9H0F5 515 aa4.94□□□□□ -1.62
TDP1-207ENST00000553617 TNFRSF12AQ9NP84 129 aa4.94□□□□□ -1.62
TDP1-207ENST00000553617 ZFP64Q9NPA5 681 aa4.94□□□□□ -1.62
TDP1-207ENST00000553617 BSDC1Q9NW68 430 aaPredicted RBP4.94□□□□□ -1.62
TDP1-207ENST00000553617 TAGLN3Q9UI15 199 aa4.94□□□□□ -1.62
TDP1-207ENST00000553617 KCNG1Q9UIX4 513 aa4.94□□□□□ -1.62
TDP1-207ENST00000553617 PALD1Q9ULE6 856 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms