RNA–Protein interactions for RNA: ENST00000553546.1

SDR39U1-205, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 648 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-205ENST00000553546 PCDHA10Q9Y5I2 948 aa17.14■□□□□ 0.33
SDR39U1-205ENST00000553546 MAFBQ9Y5Q3 323 aaPredicted RBP17.14■□□□□ 0.33
SDR39U1-205ENST00000553546 C5orf67F2Z3F1 127 aa17.13■□□□□ 0.33
SDR39U1-205ENST00000553546 ADAMTS3O15072 1205 aa17.13■□□□□ 0.33
SDR39U1-205ENST00000553546 PPFIA3O75145 1194 aa17.13■□□□□ 0.33
SDR39U1-205ENST00000553546 DEXIO95424 95 aa17.13■□□□□ 0.33
SDR39U1-205ENST00000553546 RB1P06400 928 aa17.13■□□□□ 0.33
SDR39U1-205ENST00000553546 STAG3L1P0CL83 205 aa17.13■□□□□ 0.33
SDR39U1-205ENST00000553546 CTNNB1P35222 781 aa17.13■□□□□ 0.33
SDR39U1-205ENST00000553546 TMEM62Q0P6H9 643 aa17.13■□□□□ 0.33
SDR39U1-205ENST00000553546 NPAS4Q8IUM7 802 aa17.13■□□□□ 0.33
SDR39U1-205ENST00000553546 FAM167AQ96KS9 214 aa17.13■□□□□ 0.33
SDR39U1-205ENST00000553546 C11orf84Q9BUA3 381 aaPredicted RBP17.13■□□□□ 0.33
SDR39U1-205ENST00000553546 RC3H2Q9HBD1 1191 aaKnown RBP17.13■□□□□ 0.33
SDR39U1-205ENST00000553546 RNF216Q9NWF9 866 aaPredicted RBP17.13■□□□□ 0.33
SDR39U1-205ENST00000553546 PADI3Q9ULW8 664 aa17.13■□□□□ 0.33
SDR39U1-205ENST00000553546 SAMM50Q9Y512 469 aa17.13■□□□□ 0.33
SDR39U1-205ENST00000553546 WDR64B1ANS9 1081 aa17.12■□□□□ 0.33
SDR39U1-205ENST00000553546 BTG3Q14201 252 aaPredicted RBP17.12■□□□□ 0.33
SDR39U1-205ENST00000553546 GALNT17Q6IS24 598 aa17.12■□□□□ 0.33
SDR39U1-205ENST00000553546 ALYREFQ86V81 257 aaKnown RBP17.12■□□□□ 0.33
SDR39U1-205ENST00000553546 LENG9Q96B70 501 aa17.12■□□□□ 0.33
SDR39U1-205ENST00000553546 ZNF689Q96CS4 500 aaPredicted RBP17.12■□□□□ 0.33
SDR39U1-205ENST00000553546 RIT2Q99578 217 aa17.12■□□□□ 0.33
SDR39U1-205ENST00000553546 UPF3BQ9BZI7 483 aaKnown RBP17.12■□□□□ 0.33
SDR39U1-205ENST00000553546 LMAN2LQ9H0V9 348 aa17.12■□□□□ 0.33
SDR39U1-205ENST00000553546 UBE2ZQ9H832 354 aaPredicted RBP17.12■□□□□ 0.33
SDR39U1-205ENST00000553546 PCDHA4Q9UN74 947 aa17.12■□□□□ 0.33
SDR39U1-205ENST00000553546 BRWD1Q9NSI6 2320 aa17.12■□□□□ 0.33
SDR39U1-205ENST00000553546 EVPLQ92817 2033 aa17.11■□□□□ 0.33
SDR39U1-205ENST00000553546 GPR37L1O60883 481 aa17.11■□□□□ 0.33
SDR39U1-205ENST00000553546 DGKIO75912 1065 aa17.11■□□□□ 0.33
SDR39U1-205ENST00000553546 BMPR1AP36894 532 aa17.11■□□□□ 0.33
SDR39U1-205ENST00000553546 CMTR2Q8IYT2 770 aaKnown RBP17.11■□□□□ 0.33
SDR39U1-205ENST00000553546 KIAA0319LQ8IZA0 1049 aa17.11■□□□□ 0.33
SDR39U1-205ENST00000553546 BANK1Q8NDB2 785 aa17.11■□□□□ 0.33
SDR39U1-205ENST00000553546 LINC01599Q8WXQ3 324 aa17.11■□□□□ 0.33
SDR39U1-205ENST00000553546 CLP1Q92989 425 aaKnown RBP17.11■□□□□ 0.33
SDR39U1-205ENST00000553546 PLVAPQ9BX97 442 aa17.11■□□□□ 0.33
SDR39U1-205ENST00000553546 PDRG1Q9NUG6 133 aa17.11■□□□□ 0.33
SDR39U1-205ENST00000553546 GABBR1Q9UBS5 961 aa17.11■□□□□ 0.33
SDR39U1-205ENST00000553546 WDR81Q562E7 1941 aa17.1■□□□□ 0.33
SDR39U1-205ENST00000553546 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.1■□□□□ 0.33
SDR39U1-205ENST00000553546 ZBTB42B2RXF5 422 aa17.1■□□□□ 0.33
SDR39U1-205ENST00000553546 MAGEB2O15479 319 aa17.1■□□□□ 0.33
SDR39U1-205ENST00000553546 GAS7O60861 476 aa17.1■□□□□ 0.33
SDR39U1-205ENST00000553546 RPS6KA5O75582 802 aa17.1■□□□□ 0.33
SDR39U1-205ENST00000553546 CDKL5O76039 1030 aa17.1■□□□□ 0.33
SDR39U1-205ENST00000553546 C22orf31O95567 290 aa17.1■□□□□ 0.33
SDR39U1-205ENST00000553546 ATP4AP20648 1035 aa17.1■□□□□ 0.33
SDR39U1-205ENST00000553546 SFNP31947 248 aa17.1■□□□□ 0.33
SDR39U1-205ENST00000553546 JAK3P52333 1124 aa17.1■□□□□ 0.33
SDR39U1-205ENST00000553546 ZNF710Q8N1W2 664 aa17.1■□□□□ 0.33
SDR39U1-205ENST00000553546 DAGLBQ8NCG7 672 aa17.1■□□□□ 0.33
SDR39U1-205ENST00000553546 TBCKQ8TEA7 893 aa17.1■□□□□ 0.33
SDR39U1-205ENST00000553546 UIMC1Q96RL1 719 aa17.1■□□□□ 0.33
SDR39U1-205ENST00000553546 TEKT3Q9BXF9 490 aa17.1■□□□□ 0.33
SDR39U1-205ENST00000553546 NSUN3Q9H649 340 aaKnown RBP17.1■□□□□ 0.33
SDR39U1-205ENST00000553546 DISC1Q9NRI5 854 aa17.1■□□□□ 0.33
SDR39U1-205ENST00000553546 GINS2Q9Y248 185 aa17.1■□□□□ 0.33
SDR39U1-205ENST00000553546 GPR182O15218 404 aa17.09■□□□□ 0.33
SDR39U1-205ENST00000553546 MSH4O15457 936 aa17.09■□□□□ 0.33
SDR39U1-205ENST00000553546 LINC00271P0C7V0 271 aa17.09■□□□□ 0.33
SDR39U1-205ENST00000553546 TMOD1P28289 359 aa17.09■□□□□ 0.33
SDR39U1-205ENST00000553546 NFX1Q12986 1120 aaKnown RBP17.09■□□□□ 0.33
SDR39U1-205ENST00000553546 LEXMQ3ZCV2 418 aa17.09■□□□□ 0.33
SDR39U1-205ENST00000553546 LRCH2Q5VUJ6 765 aa17.09■□□□□ 0.33
SDR39U1-205ENST00000553546 ERICH6BQ5W0A0 696 aa17.09■□□□□ 0.33
SDR39U1-205ENST00000553546 MOXD1Q6UVY6 613 aa17.09■□□□□ 0.33
SDR39U1-205ENST00000553546 RTN4RL1Q86UN2 441 aaPredicted RBP17.09■□□□□ 0.33
SDR39U1-205ENST00000553546 BLIDQ8IZY5 108 aa17.09■□□□□ 0.33
SDR39U1-205ENST00000553546 METTL13Q8N6R0 699 aa17.09■□□□□ 0.33
SDR39U1-205ENST00000553546 RDM1Q8NG50 284 aa17.09■□□□□ 0.33
SDR39U1-205ENST00000553546 SLC5A5Q92911 643 aa17.09■□□□□ 0.33
SDR39U1-205ENST00000553546 MAP7D2Q96T17 732 aa17.09■□□□□ 0.33
SDR39U1-205ENST00000553546 ERVK-5Q9HDB9 667 aa17.09■□□□□ 0.33
SDR39U1-205ENST00000553546 C1orf112Q9NSG2 853 aa17.09■□□□□ 0.33
SDR39U1-205ENST00000553546 NRBP2Q9NSY0 501 aa17.09■□□□□ 0.33
SDR39U1-205ENST00000553546 LRFN2Q9ULH4 789 aa17.09■□□□□ 0.33
SDR39U1-205ENST00000553546 NCK2O43639 380 aa17.08■□□□□ 0.32
SDR39U1-205ENST00000553546 OATP04181 439 aa17.08■□□□□ 0.32
SDR39U1-205ENST00000553546 SARSP49591 514 aaKnown RBP17.08■□□□□ 0.32
SDR39U1-205ENST00000553546 CRYBB1P53674 252 aaPredicted RBP17.08■□□□□ 0.32
SDR39U1-205ENST00000553546 STK3Q13188 491 aa17.08■□□□□ 0.32
SDR39U1-205ENST00000553546 TMEM266Q2M3C6 531 aa17.08■□□□□ 0.32
SDR39U1-205ENST00000553546 Q4G0T1 1027 aa17.08■□□□□ 0.32
SDR39U1-205ENST00000553546 NAALADL2Q58DX5 795 aa17.08■□□□□ 0.32
SDR39U1-205ENST00000553546 CRIPAKQ8N1N5 446 aa17.08■□□□□ 0.32
SDR39U1-205ENST00000553546 P2RX5Q93086 422 aa17.08■□□□□ 0.32
SDR39U1-205ENST00000553546 TMX1Q9H3N1 280 aa17.08■□□□□ 0.32
SDR39U1-205ENST00000553546 CD320Q9NPF0 282 aa17.08■□□□□ 0.32
SDR39U1-205ENST00000553546 PPP4R2Q9NY27 417 aa17.08■□□□□ 0.32
SDR39U1-205ENST00000553546 NOC2LQ9Y3T9 749 aaKnown RBP17.08■□□□□ 0.32
SDR39U1-205ENST00000553546 STK36Q9NRP7 1315 aa17.07■□□□□ 0.32
SDR39U1-205ENST00000553546 CYP3A7-CYP3A51PA0A087WV96 503 aa17.07■□□□□ 0.32
SDR39U1-205ENST00000553546 DENND3A2RUS2 1198 aa17.07■□□□□ 0.32
SDR39U1-205ENST00000553546 EIF5BO60841 1220 aaKnown RBP17.07■□□□□ 0.32
SDR39U1-205ENST00000553546 XBP1P17861 261 aa17.07■□□□□ 0.32
SDR39U1-205ENST00000553546 KCNA5P22460 613 aa17.07■□□□□ 0.32
SDR39U1-205ENST00000553546 CYP3A7P24462 503 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms