RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 GAS7O60861 476 aa20.61■□□□□ 0.89
SHMT2-206ENST00000553529 USP11P51784 963 aa20.61■□□□□ 0.89
SHMT2-206ENST00000553529 KRT76Q01546 638 aa20.61■□□□□ 0.89
SHMT2-206ENST00000553529 NONOQ15233 471 aaKnown RBP eCLIP20.61■□□□□ 0.89
SHMT2-206ENST00000553529 TSHZ1Q6ZSZ6 1077 aa20.61■□□□□ 0.89
SHMT2-206ENST00000553529 NOC2LQ9Y3T9 749 aaKnown RBP20.61■□□□□ 0.89
SHMT2-206ENST00000553529 PCDHA10Q9Y5I2 948 aa20.61■□□□□ 0.89
SHMT2-206ENST00000553529 A0A0C4DFX4 3053 aa20.6■□□□□ 0.89
SHMT2-206ENST00000553529 KIAA1671Q9BY89 1806 aa20.6■□□□□ 0.89
SHMT2-206ENST00000553529 SMIM35A0A1B0GVV1 85 aa20.6■□□□□ 0.89
SHMT2-206ENST00000553529 EML1O00423 815 aa20.6■□□□□ 0.89
SHMT2-206ENST00000553529 CSPG5O95196 566 aa20.6■□□□□ 0.89
SHMT2-206ENST00000553529 PSAPP07602 524 aa20.6■□□□□ 0.89
SHMT2-206ENST00000553529 PRKCEQ02156 737 aa20.6■□□□□ 0.89
SHMT2-206ENST00000553529 DRP2Q13474 957 aa20.6■□□□□ 0.89
SHMT2-206ENST00000553529 KIZQ2M2Z5 673 aa20.6■□□□□ 0.89
SHMT2-206ENST00000553529 Q4G0T1 1027 aa20.6■□□□□ 0.89
SHMT2-206ENST00000553529 CPLX2Q6PUV4 134 aaKnown RBP20.6■□□□□ 0.89
SHMT2-206ENST00000553529 RSPH3Q86UC2 560 aa20.6■□□□□ 0.89
SHMT2-206ENST00000553529 BANK1Q8NDB2 785 aa20.6■□□□□ 0.89
SHMT2-206ENST00000553529 SP7Q8TDD2 431 aaPredicted RBP20.6■□□□□ 0.89
SHMT2-206ENST00000553529 MBOAT7Q96N66 472 aa20.6■□□□□ 0.89
SHMT2-206ENST00000553529 TEKT3Q9BXF9 490 aa20.6■□□□□ 0.89
SHMT2-206ENST00000553529 CELF4Q9BZC1 486 aaKnown RBP20.6■□□□□ 0.89
SHMT2-206ENST00000553529 PADI3Q9ULW8 664 aa20.6■□□□□ 0.89
SHMT2-206ENST00000553529 EFCAB14O75071 495 aa20.59■□□□□ 0.89
SHMT2-206ENST00000553529 STBD1O95210 358 aa20.59■□□□□ 0.89
SHMT2-206ENST00000553529 LINC00271P0C7V0 271 aa20.59■□□□□ 0.89
SHMT2-206ENST00000553529 ERVK-21P61565 698 aa20.59■□□□□ 0.89
SHMT2-206ENST00000553529 GUCY1B3Q02153 619 aa20.59■□□□□ 0.89
SHMT2-206ENST00000553529 MCTP2Q6DN12 878 aa20.59■□□□□ 0.89
SHMT2-206ENST00000553529 B3GNT9Q6UX72 402 aa20.59■□□□□ 0.89
SHMT2-206ENST00000553529 SMAP1Q8IYB5 467 aaPredicted RBP20.59■□□□□ 0.89
SHMT2-206ENST00000553529 METTL13Q8N6R0 699 aa20.59■□□□□ 0.89
SHMT2-206ENST00000553529 TNFRSF25Q93038 417 aa20.59■□□□□ 0.89
SHMT2-206ENST00000553529 YME1L1Q96TA2 773 aa20.59■□□□□ 0.89
SHMT2-206ENST00000553529 OSMRQ99650 979 aa20.59■□□□□ 0.89
SHMT2-206ENST00000553529 WRAP73Q9P2S5 460 aaPredicted RBP20.59■□□□□ 0.89
SHMT2-206ENST00000553529 DDX25Q9UHL0 483 aaKnown RBP20.59■□□□□ 0.89
SHMT2-206ENST00000553529 XIRP2A4UGR9 3374 aa20.58■□□□□ 0.89
SHMT2-206ENST00000553529 CYP3A7-CYP3A51PA0A087WV96 503 aa20.58■□□□□ 0.89
SHMT2-206ENST00000553529 WDR64B1ANS9 1081 aa20.58■□□□□ 0.89
SHMT2-206ENST00000553529 CDKL5O76039 1030 aa20.58■□□□□ 0.89
SHMT2-206ENST00000553529 OATP04181 439 aa20.58■□□□□ 0.89
SHMT2-206ENST00000553529 CYP3A7P24462 503 aa20.58■□□□□ 0.89
SHMT2-206ENST00000553529 KRT25Q7Z3Z0 450 aa20.58■□□□□ 0.89
SHMT2-206ENST00000553529 POTEDQ86YR6 584 aa20.58■□□□□ 0.89
SHMT2-206ENST00000553529 BBXQ8WY36 941 aaPredicted RBP20.58■□□□□ 0.89
SHMT2-206ENST00000553529 APBB2Q92870 758 aa20.58■□□□□ 0.89
SHMT2-206ENST00000553529 TGS1Q96RS0 853 aaKnown RBP20.58■□□□□ 0.89
SHMT2-206ENST00000553529 RC3H2Q9HBD1 1191 aaKnown RBP20.58■□□□□ 0.89
SHMT2-206ENST00000553529 HCSTQ9UBK5 93 aa20.58■□□□□ 0.89
SHMT2-206ENST00000553529 TCEAL9Q9UHQ7 104 aa20.58■□□□□ 0.89
SHMT2-206ENST00000553529 INSL6Q9Y581 213 aa20.58■□□□□ 0.89
SHMT2-206ENST00000553529 TRANK1O15050 2925 aa20.57■□□□□ 0.88
SHMT2-206ENST00000553529 SLC26A2P50443 739 aa20.57■□□□□ 0.88
SHMT2-206ENST00000553529 SKIV2LQ15477 1246 aaKnown RBP20.57■□□□□ 0.88
SHMT2-206ENST00000553529 ZNF484Q5JVG2 852 aa20.57■□□□□ 0.88
SHMT2-206ENST00000553529 IER5Q5VY09 327 aa20.57■□□□□ 0.88
SHMT2-206ENST00000553529 PLA2G4FQ68DD2 849 aa20.57■□□□□ 0.88
SHMT2-206ENST00000553529 MIER3Q7Z3K6 550 aa20.57■□□□□ 0.88
SHMT2-206ENST00000553529 CCDC83Q8IWF9 413 aa20.57■□□□□ 0.88
SHMT2-206ENST00000553529 LINC01465Q8N7H1 131 aa20.57■□□□□ 0.88
SHMT2-206ENST00000553529 ZNF579Q8NAF0 562 aaKnown RBP20.57■□□□□ 0.88
SHMT2-206ENST00000553529 HAS1Q92839 578 aa20.57■□□□□ 0.88
SHMT2-206ENST00000553529 RIT2Q99578 217 aa20.57■□□□□ 0.88
SHMT2-206ENST00000553529 ERVK-5Q9HDB9 667 aa20.57■□□□□ 0.88
SHMT2-206ENST00000553529 VAV3Q9UKW4 847 aa20.57■□□□□ 0.88
SHMT2-206ENST00000553529 COL1A2P08123 1366 aa20.57■□□□□ 0.88
SHMT2-206ENST00000553529 CCDC194A0A1B0GVG4 234 aa20.56■□□□□ 0.88
SHMT2-206ENST00000553529 CCNT1O60563 726 aaKnown RBP20.56■□□□□ 0.88
SHMT2-206ENST00000553529 GPR32O75388 356 aa20.56■□□□□ 0.88
SHMT2-206ENST00000553529 CSDE1O75534 798 aaKnown RBP20.56■□□□□ 0.88
SHMT2-206ENST00000553529 FGFR4P22455 802 aa20.56■□□□□ 0.88
SHMT2-206ENST00000553529 KCNQ1P51787 676 aa20.56■□□□□ 0.88
SHMT2-206ENST00000553529 NFX1Q12986 1120 aaKnown RBP20.56■□□□□ 0.88
SHMT2-206ENST00000553529 PAK2Q13177 524 aa20.56■□□□□ 0.88
SHMT2-206ENST00000553529 PAN2Q504Q3 1202 aaKnown RBP20.56■□□□□ 0.88
SHMT2-206ENST00000553529 EPC2Q52LR7 807 aa20.56■□□□□ 0.88
SHMT2-206ENST00000553529 FAM228AQ86W67 206 aa20.56■□□□□ 0.88
SHMT2-206ENST00000553529 NECAB3Q96P71 396 aaPredicted RBP20.56■□□□□ 0.88
SHMT2-206ENST00000553529 CEP89Q96ST8 783 aa20.56■□□□□ 0.88
SHMT2-206ENST00000553529 BTBD18B2RXH4 712 aa20.55■□□□□ 0.88
SHMT2-206ENST00000553529 ANKRD1Q15327 319 aa20.55■□□□□ 0.88
SHMT2-206ENST00000553529 MTERF2Q49AM1 385 aa20.55■□□□□ 0.88
SHMT2-206ENST00000553529 EFCAB12Q6NXP0 572 aa20.55■□□□□ 0.88
SHMT2-206ENST00000553529 NEK8Q86SG6 692 aa20.55■□□□□ 0.88
SHMT2-206ENST00000553529 CRIPAKQ8N1N5 446 aa20.55■□□□□ 0.88
SHMT2-206ENST00000553529 FBXO22Q8NEZ5 403 aa20.55■□□□□ 0.88
SHMT2-206ENST00000553529 KCNMB3Q9NPA1 279 aa20.55■□□□□ 0.88
SHMT2-206ENST00000553529 BMP2KQ9NSY1 1161 aaPredicted RBP20.55■□□□□ 0.88
SHMT2-206ENST00000553529 THEGQ9P2T0 379 aa20.55■□□□□ 0.88
SHMT2-206ENST00000553529 SEPT9Q9UHD8 586 aaPredicted RBP20.55■□□□□ 0.88
SHMT2-206ENST00000553529 TCF20Q9UGU0 1960 aaKnown RBP20.55■□□□□ 0.88
SHMT2-206ENST00000553529 TTC3P53804 2025 aa20.54■□□□□ 0.88
SHMT2-206ENST00000553529 M0QZ92 97 aa20.54■□□□□ 0.88
SHMT2-206ENST00000553529 POU3F3P20264 500 aaPredicted RBP20.54■□□□□ 0.88
SHMT2-206ENST00000553529 GALNT17Q6IS24 598 aa20.54■□□□□ 0.88
SHMT2-206ENST00000553529 ST3GAL5Q9UNP4 418 aa20.54■□□□□ 0.88
SHMT2-206ENST00000553529 ADGRA3Q8IWK6 1321 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms