RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 STAT5BP51692 787 aa11.29□□□□□ -0.6
ACTN1-208ENST00000553370 ACTR2P61160 394 aa11.29□□□□□ -0.6
ACTN1-208ENST00000553370 ADAM17P78536 824 aa11.29□□□□□ -0.6
ACTN1-208ENST00000553370 KRT76Q01546 638 aa11.29□□□□□ -0.6
ACTN1-208ENST00000553370 MGAT3Q09327 533 aa11.29□□□□□ -0.6
ACTN1-208ENST00000553370 WWC2Q6AWC2 1192 aa11.29□□□□□ -0.6
ACTN1-208ENST00000553370 NPAS4Q8IUM7 802 aa11.29□□□□□ -0.6
ACTN1-208ENST00000553370 TRAPPC12Q8WVT3 735 aa11.29□□□□□ -0.6
ACTN1-208ENST00000553370 ZBTB10Q96DT7 871 aa11.29□□□□□ -0.6
ACTN1-208ENST00000553370 PCMTD1Q96MG8 357 aaPredicted RBP11.29□□□□□ -0.6
ACTN1-208ENST00000553370 MXRA8Q9BRK3 442 aa11.29□□□□□ -0.6
ACTN1-208ENST00000553370 ANO3Q9BYT9 981 aa11.29□□□□□ -0.6
ACTN1-208ENST00000553370 UPF3BQ9BZI7 483 aaKnown RBP11.29□□□□□ -0.6
ACTN1-208ENST00000553370 GLT8D2Q9H1C3 349 aa11.29□□□□□ -0.6
ACTN1-208ENST00000553370 KCNH7Q9NS40 1196 aa11.29□□□□□ -0.6
ACTN1-208ENST00000553370 CNTNAP5Q8WYK1 1306 aa11.29□□□□□ -0.6
ACTN1-208ENST00000553370 ZNF318Q5VUA4 2279 aa11.29□□□□□ -0.6
ACTN1-208ENST00000553370 ZDBF2Q9HCK1 2354 aa11.28□□□□□ -0.6
ACTN1-208ENST00000553370 POTEB3A0JP26 581 aa11.28□□□□□ -0.6
ACTN1-208ENST00000553370 MBLAC1A4D2B0 266 aaPredicted RBP11.28□□□□□ -0.6
ACTN1-208ENST00000553370 hCG_1984214I3L0E3 225 aa11.28□□□□□ -0.6
ACTN1-208ENST00000553370 ENPP3O14638 875 aa11.28□□□□□ -0.6
ACTN1-208ENST00000553370 GRM6O15303 877 aa11.28□□□□□ -0.6
ACTN1-208ENST00000553370 DCXO43602 365 aa11.28□□□□□ -0.6
ACTN1-208ENST00000553370 NFX1Q12986 1120 aaKnown RBP11.28□□□□□ -0.6
ACTN1-208ENST00000553370 CEP55Q53EZ4 464 aa11.28□□□□□ -0.6
ACTN1-208ENST00000553370 ODR4Q5SWX8 454 aa11.28□□□□□ -0.6
ACTN1-208ENST00000553370 APOA5Q6Q788 366 aa11.28□□□□□ -0.6
ACTN1-208ENST00000553370 POTEBQ6S5H4 581 aa11.28□□□□□ -0.6
ACTN1-208ENST00000553370 CMTR2Q8IYT2 770 aaKnown RBP11.28□□□□□ -0.6
ACTN1-208ENST00000553370 ZNF713Q8N859 430 aaPredicted RBP11.28□□□□□ -0.6
ACTN1-208ENST00000553370 NEK9Q8TD19 979 aa11.28□□□□□ -0.6
ACTN1-208ENST00000553370 KHSRPQ92945 711 aaKnown RBP eCLIP11.28□□□□□ -0.6
ACTN1-208ENST00000553370 TCEANC2Q96MN5 208 aa11.28□□□□□ -0.6
ACTN1-208ENST00000553370 NEK1Q96PY6 1258 aa11.28□□□□□ -0.6
ACTN1-208ENST00000553370 PLVAPQ9BX97 442 aa11.28□□□□□ -0.6
ACTN1-208ENST00000553370 ALG13Q9NP73 1137 aaKnown RBP11.28□□□□□ -0.6
ACTN1-208ENST00000553370 CD320Q9NPF0 282 aa11.28□□□□□ -0.6
ACTN1-208ENST00000553370 RIC8AQ9NPQ8 531 aa11.28□□□□□ -0.6
ACTN1-208ENST00000553370 PRKAG3Q9UGI9 489 aa11.28□□□□□ -0.6
ACTN1-208ENST00000553370 NFASCO94856 1347 aa11.28□□□□□ -0.6
ACTN1-208ENST00000553370 KLF18A0A0U1RQI7 1052 aa11.27□□□□□ -0.61
ACTN1-208ENST00000553370 SMCO2A6NFE2 343 aa11.27□□□□□ -0.61
ACTN1-208ENST00000553370 PRR33A8MZF0 331 aa11.27□□□□□ -0.61
ACTN1-208ENST00000553370 C5orf67F2Z3F1 127 aa11.27□□□□□ -0.61
ACTN1-208ENST00000553370 MMP1P03956 469 aa11.27□□□□□ -0.61
ACTN1-208ENST00000553370 SLC26A2P50443 739 aa11.27□□□□□ -0.61
ACTN1-208ENST00000553370 AKAP17AQ02040 695 aaKnown RBP11.27□□□□□ -0.61
ACTN1-208ENST00000553370 AP3B2Q13367 1082 aa11.27□□□□□ -0.61
ACTN1-208ENST00000553370 KRT32Q14532 448 aa11.27□□□□□ -0.61
ACTN1-208ENST00000553370 PLCB4Q15147 1175 aa11.27□□□□□ -0.61
ACTN1-208ENST00000553370 TMEM266Q2M3C6 531 aa11.27□□□□□ -0.61
ACTN1-208ENST00000553370 MARCH8Q5T0T0 291 aa11.27□□□□□ -0.61
ACTN1-208ENST00000553370 MIS18BP1Q6P0N0 1132 aa11.27□□□□□ -0.61
ACTN1-208ENST00000553370 PDXDC2PQ6P474 469 aa11.27□□□□□ -0.61
ACTN1-208ENST00000553370 TRMT1LQ7Z2T5 733 aaKnown RBP11.27□□□□□ -0.61
ACTN1-208ENST00000553370 SGMS1Q86VZ5 419 aa11.27□□□□□ -0.61
ACTN1-208ENST00000553370 ADHFE1Q8IWW8 467 aa11.27□□□□□ -0.61
ACTN1-208ENST00000553370 MICAL1Q8TDZ2 1067 aa11.27□□□□□ -0.61
ACTN1-208ENST00000553370 CCDC12Q8WUD4 166 aaPredicted RBP11.27□□□□□ -0.61
ACTN1-208ENST00000553370 SCLT1Q96NL6 688 aa11.27□□□□□ -0.61
ACTN1-208ENST00000553370 PPP1R16BQ96T49 567 aa11.27□□□□□ -0.61
ACTN1-208ENST00000553370 EPAS1Q99814 870 aa11.27□□□□□ -0.61
ACTN1-208ENST00000553370 CELF4Q9BZC1 486 aaKnown RBP11.27□□□□□ -0.61
ACTN1-208ENST00000553370 AAASQ9NRG9 546 aa11.27□□□□□ -0.61
ACTN1-208ENST00000553370 CD207Q9UJ71 328 aa11.27□□□□□ -0.61
ACTN1-208ENST00000553370 PADI3Q9ULW8 664 aa11.27□□□□□ -0.61
ACTN1-208ENST00000553370 PCDHB7Q9Y5E2 793 aa11.27□□□□□ -0.61
ACTN1-208ENST00000553370 PCDHB12Q9Y5F1 795 aa11.27□□□□□ -0.61
ACTN1-208ENST00000553370 PCDHA2Q9Y5H9 948 aa11.27□□□□□ -0.61
ACTN1-208ENST00000553370 MRPL42Q9Y6G3 142 aaKnown RBP11.27□□□□□ -0.61
ACTN1-208ENST00000553370 MYO10Q9HD67 2058 aa11.26□□□□□ -0.61
ACTN1-208ENST00000553370 STXBP3O00186 592 aa11.26□□□□□ -0.61
ACTN1-208ENST00000553370 PPFIA3O75145 1194 aa11.26□□□□□ -0.61
ACTN1-208ENST00000553370 RPS6KA5O75582 802 aa11.26□□□□□ -0.61
ACTN1-208ENST00000553370 DGKIO75912 1065 aa11.26□□□□□ -0.61
ACTN1-208ENST00000553370 ZP2Q05996 745 aa11.26□□□□□ -0.61
ACTN1-208ENST00000553370 HYAL1Q12794 435 aa11.26□□□□□ -0.61
ACTN1-208ENST00000553370 SMAD4Q13485 552 aaKnown RBP11.26□□□□□ -0.61
ACTN1-208ENST00000553370 JAKMIP3Q5VZ66 844 aa11.26□□□□□ -0.61
ACTN1-208ENST00000553370 MTHFD1LQ6UB35 978 aa11.26□□□□□ -0.61
ACTN1-208ENST00000553370 PLPPR4Q7Z2D5 763 aa11.26□□□□□ -0.61
ACTN1-208ENST00000553370 PLA2G4DQ86XP0 818 aa11.26□□□□□ -0.61
ACTN1-208ENST00000553370 NME8Q8N427 588 aa11.26□□□□□ -0.61
ACTN1-208ENST00000553370 METTL13Q8N6R0 699 aa11.26□□□□□ -0.61
ACTN1-208ENST00000553370 CLP1Q92989 425 aaKnown RBP11.26□□□□□ -0.61
ACTN1-208ENST00000553370 AGO3Q9H9G7 860 aaKnown RBP11.26□□□□□ -0.61
ACTN1-208ENST00000553370 AGO4Q9HCK5 861 aaKnown RBP11.26□□□□□ -0.61
ACTN1-208ENST00000553370 ZNF302Q9NR11 478 aa11.26□□□□□ -0.61
ACTN1-208ENST00000553370 TMEM260Q9NX78 707 aa11.26□□□□□ -0.61
ACTN1-208ENST00000553370 SAMM50Q9Y512 469 aa11.26□□□□□ -0.61
ACTN1-208ENST00000553370 SQORQ9Y6N5 450 aa11.26□□□□□ -0.61
ACTN1-208ENST00000553370 V9GY48 417 aaPredicted RBP11.26□□□□□ -0.61
ACTN1-208ENST00000553370 IGSF9BQ9UPX0 1349 aa11.26□□□□□ -0.61
ACTN1-208ENST00000553370 WDFY4Q6ZS81 3184 aa11.26□□□□□ -0.61
ACTN1-208ENST00000553370 TECTAO75443 2155 aa11.26□□□□□ -0.61
ACTN1-208ENST00000553370 CCDC196A0A1B0GTZ2 297 aa11.25□□□□□ -0.61
ACTN1-208ENST00000553370 SMIM35A0A1B0GVV1 85 aa11.25□□□□□ -0.61
ACTN1-208ENST00000553370 TBKBP1A7MCY6 615 aa11.25□□□□□ -0.61
ACTN1-208ENST00000553370 MAP3K7O43318 606 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms