RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 TIGD7Q6NT04 549 aaPredicted RBP7.13□□□□□ -1.27
SCFD1-208ENST00000553278 CYP4F22Q6NT55 531 aa7.13□□□□□ -1.27
SCFD1-208ENST00000553278 CCDC62Q6P9F0 684 aa7.13□□□□□ -1.27
SCFD1-208ENST00000553278 KCTD1Q719H9 257 aa7.13□□□□□ -1.27
SCFD1-208ENST00000553278 PHYKPLQ8IUZ5 450 aa7.13□□□□□ -1.27
SCFD1-208ENST00000553278 SPACA3Q8IXA5 215 aa7.13□□□□□ -1.27
SCFD1-208ENST00000553278 PPM1NQ8N819 430 aa7.13□□□□□ -1.27
SCFD1-208ENST00000553278 AUTS2Q8WXX7 1259 aa7.13□□□□□ -1.27
SCFD1-208ENST00000553278 FERMT2Q96AC1 680 aa7.13□□□□□ -1.27
SCFD1-208ENST00000553278 COA7Q96BR5 231 aa7.13□□□□□ -1.27
SCFD1-208ENST00000553278 SYTL4Q96C24 671 aaPredicted RBP7.13□□□□□ -1.27
SCFD1-208ENST00000553278 SENP7Q9BQF6 1050 aa7.13□□□□□ -1.27
SCFD1-208ENST00000553278 NGRNQ9NPE2 291 aaKnown RBP7.13□□□□□ -1.27
SCFD1-208ENST00000553278 LZTS1Q9Y250 596 aa7.13□□□□□ -1.27
SCFD1-208ENST00000553278 PCDHGB6Q9Y5F9 930 aa7.13□□□□□ -1.27
SCFD1-208ENST00000553278 PPP2R3BQ9Y5P8 575 aa7.13□□□□□ -1.27
SCFD1-208ENST00000553278 MORC2Q9Y6X9 1032 aaPredicted RBP7.13□□□□□ -1.27
SCFD1-208ENST00000553278 FAM170BA6NMN3 283 aa7.12□□□□□ -1.27
SCFD1-208ENST00000553278 GOLIM4O00461 696 aa7.12□□□□□ -1.27
SCFD1-208ENST00000553278 FOXP2O15409 715 aa7.12□□□□□ -1.27
SCFD1-208ENST00000553278 BUB1BO60566 1050 aaPredicted RBP7.12□□□□□ -1.27
SCFD1-208ENST00000553278 UBXN7O94888 489 aa7.12□□□□□ -1.27
SCFD1-208ENST00000553278 SEC23AQ15436 765 aa7.12□□□□□ -1.27
SCFD1-208ENST00000553278 PGS1Q32NB8 556 aa7.12□□□□□ -1.27
SCFD1-208ENST00000553278 ALFQ53S48 1182 aa7.12□□□□□ -1.27
SCFD1-208ENST00000553278 CLEC4GQ6UXB4 293 aa7.12□□□□□ -1.27
SCFD1-208ENST00000553278 TXNRD3Q86VQ6 643 aa7.12□□□□□ -1.27
SCFD1-208ENST00000553278 PRR18Q8N4B5 295 aa7.12□□□□□ -1.27
SCFD1-208ENST00000553278 PLEKHO2Q8TD55 490 aa7.12□□□□□ -1.27
SCFD1-208ENST00000553278 POF1BQ8WVV4 589 aa7.12□□□□□ -1.27
SCFD1-208ENST00000553278 MAML3Q96JK9 1138 aa7.12□□□□□ -1.27
SCFD1-208ENST00000553278 TRMT13Q9NUP7 481 aaKnown RBP7.12□□□□□ -1.27
SCFD1-208ENST00000553278 TNFRSF10DQ9UBN6 386 aa7.12□□□□□ -1.27
SCFD1-208ENST00000553278 SERPINB13Q9UIV8 391 aa7.12□□□□□ -1.27
SCFD1-208ENST00000553278 GTF2A1LQ9UNN4 478 aa7.12□□□□□ -1.27
SCFD1-208ENST00000553278 ZNF281Q9Y2X9 895 aa7.12□□□□□ -1.27
SCFD1-208ENST00000553278 RNF225M0QZC1 329 aaPredicted RBP7.11□□□□□ -1.27
SCFD1-208ENST00000553278 B3GALT2O43825 422 aa7.11□□□□□ -1.27
SCFD1-208ENST00000553278 PIP5K1CO60331 668 aa7.11□□□□□ -1.27
SCFD1-208ENST00000553278 ARHGEF15O94989 841 aa7.11□□□□□ -1.27
SCFD1-208ENST00000553278 CEACAM5P06731 702 aa7.11□□□□□ -1.27
SCFD1-208ENST00000553278 ECE1P42892 770 aa7.11□□□□□ -1.27
SCFD1-208ENST00000553278 CORO7P57737 925 aa7.11□□□□□ -1.27
SCFD1-208ENST00000553278 ALDH6A1Q02252 535 aaKnown RBP7.11□□□□□ -1.27
SCFD1-208ENST00000553278 MUM1Q2TAK8 710 aa7.11□□□□□ -1.27
SCFD1-208ENST00000553278 CATSPEREQ5SY80 951 aa7.11□□□□□ -1.27
SCFD1-208ENST00000553278 WDR78Q5VTH9 848 aa7.11□□□□□ -1.27
SCFD1-208ENST00000553278 BTBD8Q5XKL5 378 aa7.11□□□□□ -1.27
SCFD1-208ENST00000553278 STEAP3Q658P3 488 aa7.11□□□□□ -1.27
SCFD1-208ENST00000553278 CCDC70Q6NSX1 233 aa7.11□□□□□ -1.27
SCFD1-208ENST00000553278 SKAP1Q86WV1 359 aa7.11□□□□□ -1.27
SCFD1-208ENST00000553278 KIAA0319LQ8IZA0 1049 aa7.11□□□□□ -1.27
SCFD1-208ENST00000553278 FBXL6Q8N531 539 aa7.11□□□□□ -1.27
SCFD1-208ENST00000553278 LZTR1Q8N653 840 aa7.11□□□□□ -1.27
SCFD1-208ENST00000553278 NLGN2Q8NFZ4 835 aa7.11□□□□□ -1.27
SCFD1-208ENST00000553278 SGCZQ96LD1 299 aa7.11□□□□□ -1.27
SCFD1-208ENST00000553278 B3GNT5Q9BYG0 378 aa7.11□□□□□ -1.27
SCFD1-208ENST00000553278 NUP62CLQ9H1M0 184 aa7.11□□□□□ -1.27
SCFD1-208ENST00000553278 RC3H2Q9HBD1 1191 aaKnown RBP7.11□□□□□ -1.27
SCFD1-208ENST00000553278 RIC8BQ9NVN3 520 aa7.11□□□□□ -1.27
SCFD1-208ENST00000553278 RWDD3Q9Y3V2 267 aa7.11□□□□□ -1.27
SCFD1-208ENST00000553278 ST20-MTHFSA0A0A6YYL1 179 aa7.1□□□□□ -1.27
SCFD1-208ENST00000553278 MGEA5O60502 916 aa7.1□□□□□ -1.27
SCFD1-208ENST00000553278 PPP1R11O60927 126 aaPredicted RBP7.1□□□□□ -1.27
SCFD1-208ENST00000553278 PTPN1P18031 435 aaKnown RBP7.1□□□□□ -1.27
SCFD1-208ENST00000553278 GSK3AP49840 483 aa7.1□□□□□ -1.27
SCFD1-208ENST00000553278 EPHA5P54756 1037 aa7.1□□□□□ -1.27
SCFD1-208ENST00000553278 BCAR1P56945 870 aa7.1□□□□□ -1.27
SCFD1-208ENST00000553278 LMOD3Q0VAK6 560 aa7.1□□□□□ -1.27
SCFD1-208ENST00000553278 DUSP4Q13115 394 aa7.1□□□□□ -1.27
SCFD1-208ENST00000553278 BIRC3Q13489 604 aa7.1□□□□□ -1.27
SCFD1-208ENST00000553278 PITRM1Q5JRX3 1037 aa7.1□□□□□ -1.27
SCFD1-208ENST00000553278 RNF220Q5VTB9 566 aa7.1□□□□□ -1.27
SCFD1-208ENST00000553278 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.1□□□□□ -1.27
SCFD1-208ENST00000553278 BEND7Q8N7W2 519 aaPredicted RBP7.1□□□□□ -1.27
SCFD1-208ENST00000553278 FAM181AQ8N9Y4 354 aa7.1□□□□□ -1.27
SCFD1-208ENST00000553278 DEPTORQ8TB45 409 aa7.1□□□□□ -1.27
SCFD1-208ENST00000553278 TBCBQ99426 244 aa7.1□□□□□ -1.27
SCFD1-208ENST00000553278 MTA3Q9BTC8 594 aa7.1□□□□□ -1.27
SCFD1-208ENST00000553278 SEMA4AQ9H3S1 761 aa7.1□□□□□ -1.27
SCFD1-208ENST00000553278 POFUT1Q9H488 388 aa7.1□□□□□ -1.27
SCFD1-208ENST00000553278 SMOC1Q9H4F8 434 aa7.1□□□□□ -1.27
SCFD1-208ENST00000553278 C7orf69Q9H7B7 122 aa7.1□□□□□ -1.27
SCFD1-208ENST00000553278 RSAD1Q9HA92 442 aa7.1□□□□□ -1.27
SCFD1-208ENST00000553278 IFT122Q9HBG6 1241 aa7.1□□□□□ -1.27
SCFD1-208ENST00000553278 SEMA3GQ9NS98 782 aa7.1□□□□□ -1.27
SCFD1-208ENST00000553278 RTEL1Q9NZ71 1219 aa7.1□□□□□ -1.27
SCFD1-208ENST00000553278 L1RE1Q9UN81 338 aa7.1□□□□□ -1.27
SCFD1-208ENST00000553278 POLHQ9Y253 713 aa7.1□□□□□ -1.27
SCFD1-208ENST00000553278 IPPQ9Y573 584 aa7.1□□□□□ -1.27
SCFD1-208ENST00000553278 A0A1W2PQ27 194 aa7.09□□□□□ -1.27
SCFD1-208ENST00000553278 A0A1W2PQ45 241 aaPredicted RBP7.09□□□□□ -1.27
SCFD1-208ENST00000553278 A0A1W2PQ64 194 aa7.09□□□□□ -1.27
SCFD1-208ENST00000553278 A0A1W2PQC6 194 aa7.09□□□□□ -1.27
SCFD1-208ENST00000553278 A0A1W2PQD8 194 aa7.09□□□□□ -1.27
SCFD1-208ENST00000553278 A0A1W2PQY0 241 aa7.09□□□□□ -1.27
SCFD1-208ENST00000553278 UBA6A0AVT1 1052 aaPredicted RBP7.09□□□□□ -1.27
SCFD1-208ENST00000553278 PRSS38A1L453 326 aa7.09□□□□□ -1.27
SCFD1-208ENST00000553278 HMX2A2RU54 273 aa7.09□□□□□ -1.27
SCFD1-208ENST00000553278 PRAMEF25A6NGN4 478 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms