RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 PPME1Q9Y570 386 aa13.14□□□□□ -0.31
TRAFD1-209ENST00000552896 STBD1O95210 358 aa13.13□□□□□ -0.31
TRAFD1-209ENST00000552896 LYPLA2O95372 231 aa13.13□□□□□ -0.31
TRAFD1-209ENST00000552896 CXCL10P02778 98 aa13.13□□□□□ -0.31
TRAFD1-209ENST00000552896 CTSHP09668 335 aa13.13□□□□□ -0.31
TRAFD1-209ENST00000552896 KLRC1P26715 233 aa13.13□□□□□ -0.31
TRAFD1-209ENST00000552896 CYP4A11Q02928 519 aa13.13□□□□□ -0.31
TRAFD1-209ENST00000552896 TARBP2Q15633 366 aaKnown RBP13.13□□□□□ -0.31
TRAFD1-209ENST00000552896 HABP4Q5JVS0 413 aaKnown RBP13.13□□□□□ -0.31
TRAFD1-209ENST00000552896 FAM26DQ5JW98 314 aa13.13□□□□□ -0.31
TRAFD1-209ENST00000552896 TMEM240Q5SV17 173 aa13.13□□□□□ -0.31
TRAFD1-209ENST00000552896 C9orf50Q5SZB4 431 aa13.13□□□□□ -0.31
TRAFD1-209ENST00000552896 HAUS3Q68CZ6 603 aa13.13□□□□□ -0.31
TRAFD1-209ENST00000552896 ERMNQ8TAM6 284 aa13.13□□□□□ -0.31
TRAFD1-209ENST00000552896 VWCEQ96DN2 955 aa13.13□□□□□ -0.31
TRAFD1-209ENST00000552896 DYDC2Q96IM9 177 aa13.13□□□□□ -0.31
TRAFD1-209ENST00000552896 EIF2AK1Q9BQI3 630 aaKnown RBP13.13□□□□□ -0.31
TRAFD1-209ENST00000552896 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.13□□□□□ -0.31
TRAFD1-209ENST00000552896 RAB34Q9BZG1 259 aa13.13□□□□□ -0.31
TRAFD1-209ENST00000552896 ZSWIM4Q9H7M6 989 aa13.13□□□□□ -0.31
TRAFD1-209ENST00000552896 WRAP73Q9P2S5 460 aaPredicted RBP13.13□□□□□ -0.31
TRAFD1-209ENST00000552896 RSPH10B2B2RC85 870 aa13.12□□□□□ -0.31
TRAFD1-209ENST00000552896 M0QZ92 97 aa13.12□□□□□ -0.31
TRAFD1-209ENST00000552896 MAGEB2O15479 319 aa13.12□□□□□ -0.31
TRAFD1-209ENST00000552896 RSPH10BP0C881 870 aa13.12□□□□□ -0.31
TRAFD1-209ENST00000552896 TECP42680 631 aa13.12□□□□□ -0.31
TRAFD1-209ENST00000552896 MRPS6P82932 125 aaKnown RBP13.12□□□□□ -0.31
TRAFD1-209ENST00000552896 MGAT3Q09327 533 aa13.12□□□□□ -0.31
TRAFD1-209ENST00000552896 TBC1D8BQ0IIM8 1120 aa13.12□□□□□ -0.31
TRAFD1-209ENST00000552896 BECN1Q14457 450 aa13.12□□□□□ -0.31
TRAFD1-209ENST00000552896 MBTPS1Q14703 1052 aa13.12□□□□□ -0.31
TRAFD1-209ENST00000552896 SHHQ15465 462 aa13.12□□□□□ -0.31
TRAFD1-209ENST00000552896 ARL6IP4Q66PJ3 421 aaKnown RBP13.12□□□□□ -0.31
TRAFD1-209ENST00000552896 ANO5Q75V66 913 aa13.12□□□□□ -0.31
TRAFD1-209ENST00000552896 C16orf59Q7L2K0 433 aa13.12□□□□□ -0.31
TRAFD1-209ENST00000552896 IGSF22Q8N9C0 903 aa13.12□□□□□ -0.31
TRAFD1-209ENST00000552896 DNAJB3Q8WWF6 145 aa13.12□□□□□ -0.31
TRAFD1-209ENST00000552896 ZBTB10Q96DT7 871 aa13.12□□□□□ -0.31
TRAFD1-209ENST00000552896 RNPC3Q96LT9 517 aaKnown RBP13.12□□□□□ -0.31
TRAFD1-209ENST00000552896 CEP89Q96ST8 783 aa13.12□□□□□ -0.31
TRAFD1-209ENST00000552896 HSD17B14Q9BPX1 270 aa13.12□□□□□ -0.31
TRAFD1-209ENST00000552896 FAM49AQ9H0Q0 323 aaPredicted RBP13.12□□□□□ -0.31
TRAFD1-209ENST00000552896 MTIF3Q9H2K0 278 aaKnown RBP13.12□□□□□ -0.31
TRAFD1-209ENST00000552896 ZSCAN16Q9H4T2 348 aaPredicted RBP13.12□□□□□ -0.31
TRAFD1-209ENST00000552896 TUFT1Q9NNX1 390 aa13.12□□□□□ -0.31
TRAFD1-209ENST00000552896 RGL1Q9NZL6 768 aa13.12□□□□□ -0.31
TRAFD1-209ENST00000552896 KDM3AQ9Y4C1 1321 aa13.12□□□□□ -0.31
TRAFD1-209ENST00000552896 NLRC5Q86WI3 1866 aa13.11□□□□□ -0.31
TRAFD1-209ENST00000552896 NBNO60934 754 aa13.11□□□□□ -0.31
TRAFD1-209ENST00000552896 BAIAP3O94812 1187 aa13.11□□□□□ -0.31
TRAFD1-209ENST00000552896 ACRP10323 421 aa13.11□□□□□ -0.31
TRAFD1-209ENST00000552896 ACTN1P12814 892 aa13.11□□□□□ -0.31
TRAFD1-209ENST00000552896 MUTP22033 750 aa13.11□□□□□ -0.31
TRAFD1-209ENST00000552896 YWHABP31946 246 aaKnown RBP13.11□□□□□ -0.31
TRAFD1-209ENST00000552896 CTTNQ14247 550 aaKnown RBP13.11□□□□□ -0.31
TRAFD1-209ENST00000552896 PDIA5Q14554 519 aa13.11□□□□□ -0.31
TRAFD1-209ENST00000552896 GPNMBQ14956 572 aa13.11□□□□□ -0.31
TRAFD1-209ENST00000552896 LRIT3Q3SXY7 679 aa13.11□□□□□ -0.31
TRAFD1-209ENST00000552896 MTERF2Q49AM1 385 aa13.11□□□□□ -0.31
TRAFD1-209ENST00000552896 RASIP1Q5U651 963 aa13.11□□□□□ -0.31
TRAFD1-209ENST00000552896 PLA2G4FQ68DD2 849 aa13.11□□□□□ -0.31
TRAFD1-209ENST00000552896 CNKSR3Q6P9H4 555 aa13.11□□□□□ -0.31
TRAFD1-209ENST00000552896 ZNF365Q70YC5 407 aa13.11□□□□□ -0.31
TRAFD1-209ENST00000552896 TRMT1LQ7Z2T5 733 aaKnown RBP13.11□□□□□ -0.31
TRAFD1-209ENST00000552896 DEFB128Q7Z7B8 93 aa13.11□□□□□ -0.31
TRAFD1-209ENST00000552896 NME8Q8N427 588 aa13.11□□□□□ -0.31
TRAFD1-209ENST00000552896 LINC01465Q8N7H1 131 aa13.11□□□□□ -0.31
TRAFD1-209ENST00000552896 HERVK_113Q902F9 699 aa13.11□□□□□ -0.31
TRAFD1-209ENST00000552896 POLR3CQ9BUI4 534 aaPredicted RBP13.11□□□□□ -0.31
TRAFD1-209ENST00000552896 CYP26B1Q9NR63 512 aa13.11□□□□□ -0.31
TRAFD1-209ENST00000552896 TRPV2Q9Y5S1 764 aa13.11□□□□□ -0.31
TRAFD1-209ENST00000552896 STK24Q9Y6E0 443 aa13.11□□□□□ -0.31
TRAFD1-209ENST00000552896 TTC3P53804 2025 aa13.1□□□□□ -0.31
TRAFD1-209ENST00000552896 TMEM150BA6NC51 233 aa13.1□□□□□ -0.31
TRAFD1-209ENST00000552896 DDX11L8A8MPP1 907 aa13.1□□□□□ -0.31
TRAFD1-209ENST00000552896 SLITRK3O94933 977 aa13.1□□□□□ -0.31
TRAFD1-209ENST00000552896 FGBP02675 491 aa13.1□□□□□ -0.31
TRAFD1-209ENST00000552896 CHRNA1P02708 482 aa13.1□□□□□ -0.31
TRAFD1-209ENST00000552896 SPATA31C1P0DKV0 1188 aa13.1□□□□□ -0.31
TRAFD1-209ENST00000552896 RPA1P27694 616 aa13.1□□□□□ -0.31
TRAFD1-209ENST00000552896 TMOD1P28289 359 aa13.1□□□□□ -0.31
TRAFD1-209ENST00000552896 RFC5P40937 340 aa13.1□□□□□ -0.31
TRAFD1-209ENST00000552896 CLCN3P51790 818 aa13.1□□□□□ -0.31
TRAFD1-209ENST00000552896 IER5Q5VY09 327 aa13.1□□□□□ -0.31
TRAFD1-209ENST00000552896 DTHD1Q6ZMT9 781 aa13.1□□□□□ -0.31
TRAFD1-209ENST00000552896 OTUD6AQ7L8S5 288 aa13.1□□□□□ -0.31
TRAFD1-209ENST00000552896 TPH2Q8IWU9 490 aa13.1□□□□□ -0.31
TRAFD1-209ENST00000552896 EXOC8Q8IYI6 725 aa13.1□□□□□ -0.31
TRAFD1-209ENST00000552896 KIAA0319LQ8IZA0 1049 aa13.1□□□□□ -0.31
TRAFD1-209ENST00000552896 ZNF710Q8N1W2 664 aa13.1□□□□□ -0.31
TRAFD1-209ENST00000552896 MAP7D2Q96T17 732 aa13.1□□□□□ -0.31
TRAFD1-209ENST00000552896 JPH2Q9BR39 696 aaPredicted RBP13.1□□□□□ -0.31
TRAFD1-209ENST00000552896 LRWD1Q9UFC0 647 aa13.1□□□□□ -0.31
TRAFD1-209ENST00000552896 CDY2AQ9Y6F7 541 aa13.1□□□□□ -0.31
TRAFD1-209ENST00000552896 RALGAPA2Q2PPJ7 1873 aa13.1□□□□□ -0.31
TRAFD1-209ENST00000552896 COL4A6Q14031 1691 aa13.09□□□□□ -0.31
TRAFD1-209ENST00000552896 IGKV6-21A0A0C4DH24 114 aa13.09□□□□□ -0.31
TRAFD1-209ENST00000552896 GAS2O43903 313 aaKnown RBP13.09□□□□□ -0.31
TRAFD1-209ENST00000552896 EFCAB14O75071 495 aa13.09□□□□□ -0.31
TRAFD1-209ENST00000552896 MAFO75444 373 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms