RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 NCBP1Q09161 790 aaKnown RBP11.47□□□□□ -0.57
TRAFD1-208ENST00000552890 IKBKEQ14164 716 aa11.47□□□□□ -0.57
TRAFD1-208ENST00000552890 MXD4Q14582 209 aaPredicted RBP11.47□□□□□ -0.57
TRAFD1-208ENST00000552890 SF3A1Q15459 793 aaKnown RBP11.47□□□□□ -0.57
TRAFD1-208ENST00000552890 FAM26DQ5JW98 314 aa11.47□□□□□ -0.57
TRAFD1-208ENST00000552890 GPR153Q6NV75 609 aa11.47□□□□□ -0.57
TRAFD1-208ENST00000552890 METTL13Q8N6R0 699 aa11.47□□□□□ -0.57
TRAFD1-208ENST00000552890 KCNG4Q8TDN1 519 aa11.47□□□□□ -0.57
TRAFD1-208ENST00000552890 SEPT8Q92599 483 aa11.47□□□□□ -0.57
TRAFD1-208ENST00000552890 CALML4Q96GE6 196 aa11.47□□□□□ -0.57
TRAFD1-208ENST00000552890 CEP170P1Q96L14 293 aa11.47□□□□□ -0.57
TRAFD1-208ENST00000552890 PPP1R12CQ9BZL4 782 aa11.47□□□□□ -0.57
TRAFD1-208ENST00000552890 FTOQ9C0B1 505 aaKnown RBP eCLIP11.47□□□□□ -0.57
TRAFD1-208ENST00000552890 CYP26B1Q9NR63 512 aa11.47□□□□□ -0.57
TRAFD1-208ENST00000552890 KCND2Q9NZV8 630 aa11.47□□□□□ -0.57
TRAFD1-208ENST00000552890 CCDC39Q9UFE4 941 aa11.47□□□□□ -0.57
TRAFD1-208ENST00000552890 SEPT9Q9UHD8 586 aaPredicted RBP11.47□□□□□ -0.57
TRAFD1-208ENST00000552890 DBR1Q9UK59 544 aaKnown RBP11.47□□□□□ -0.57
TRAFD1-208ENST00000552890 DNM3Q9UQ16 869 aa11.47□□□□□ -0.57
TRAFD1-208ENST00000552890 MTMR6Q9Y217 621 aa11.47□□□□□ -0.57
TRAFD1-208ENST00000552890 PCDHB6Q9Y5E3 794 aa11.47□□□□□ -0.57
TRAFD1-208ENST00000552890 FAM205CA6NFA0 338 aa11.46□□□□□ -0.57
TRAFD1-208ENST00000552890 GPR182O15218 404 aa11.46□□□□□ -0.57
TRAFD1-208ENST00000552890 SLITRK3O94933 977 aa11.46□□□□□ -0.57
TRAFD1-208ENST00000552890 CYP2C18P33260 490 aa11.46□□□□□ -0.57
TRAFD1-208ENST00000552890 ABCD1P33897 745 aa11.46□□□□□ -0.57
TRAFD1-208ENST00000552890 CCT6AP40227 531 aaKnown RBP11.46□□□□□ -0.57
TRAFD1-208ENST00000552890 KCNJ6P48051 423 aa11.46□□□□□ -0.57
TRAFD1-208ENST00000552890 TOB1P50616 345 aaPredicted RBP11.46□□□□□ -0.57
TRAFD1-208ENST00000552890 IGBP1P78318 339 aa11.46□□□□□ -0.57
TRAFD1-208ENST00000552890 MRPS6P82932 125 aaKnown RBP11.46□□□□□ -0.57
TRAFD1-208ENST00000552890 MDM2Q00987 491 aaPredicted RBP11.46□□□□□ -0.57
TRAFD1-208ENST00000552890 POU5F1BQ06416 359 aa11.46□□□□□ -0.57
TRAFD1-208ENST00000552890 CNKSR3Q6P9H4 555 aa11.46□□□□□ -0.57
TRAFD1-208ENST00000552890 SH3RF1Q7Z6J0 888 aa11.46□□□□□ -0.57
TRAFD1-208ENST00000552890 ZNF410Q86VK4 478 aa11.46□□□□□ -0.57
TRAFD1-208ENST00000552890 RASSF8Q8NHQ8 419 aa11.46□□□□□ -0.57
TRAFD1-208ENST00000552890 PHOSPHO2Q8TCD6 241 aa11.46□□□□□ -0.57
TRAFD1-208ENST00000552890 CCDC34Q96HJ3 373 aa11.46□□□□□ -0.57
TRAFD1-208ENST00000552890 MKI67P46013 3256 aaKnown RBP11.45□□□□□ -0.58
TRAFD1-208ENST00000552890 CARNS1A5YM72 827 aa11.45□□□□□ -0.58
TRAFD1-208ENST00000552890 EML1O00423 815 aa11.45□□□□□ -0.58
TRAFD1-208ENST00000552890 ZNF862O60290 1169 aa11.45□□□□□ -0.58
TRAFD1-208ENST00000552890 MAFO75444 373 aaPredicted RBP11.45□□□□□ -0.58
TRAFD1-208ENST00000552890 C22orf31O95567 290 aa11.45□□□□□ -0.58
TRAFD1-208ENST00000552890 YEATS4O95619 227 aa11.45□□□□□ -0.58
TRAFD1-208ENST00000552890 CXCL10P02778 98 aa11.45□□□□□ -0.58
TRAFD1-208ENST00000552890 CSF2RAP15509 400 aa11.45□□□□□ -0.58
TRAFD1-208ENST00000552890 CRYBB1P53674 252 aaPredicted RBP11.45□□□□□ -0.58
TRAFD1-208ENST00000552890 RESTQ13127 1097 aa11.45□□□□□ -0.58
TRAFD1-208ENST00000552890 TFDP1Q14186 410 aa11.45□□□□□ -0.58
TRAFD1-208ENST00000552890 SLC39A14Q15043 492 aa11.45□□□□□ -0.58
TRAFD1-208ENST00000552890 PPP2R5AQ15172 486 aa11.45□□□□□ -0.58
TRAFD1-208ENST00000552890 STK38Q15208 465 aa11.45□□□□□ -0.58
TRAFD1-208ENST00000552890 TARBP2Q15633 366 aaKnown RBP11.45□□□□□ -0.58
TRAFD1-208ENST00000552890 LRIT3Q3SXY7 679 aa11.45□□□□□ -0.58
TRAFD1-208ENST00000552890 XKR9Q5GH70 373 aa11.45□□□□□ -0.58
TRAFD1-208ENST00000552890 MARCH8Q5T0T0 291 aa11.45□□□□□ -0.58
TRAFD1-208ENST00000552890 EFCAB12Q6NXP0 572 aa11.45□□□□□ -0.58
TRAFD1-208ENST00000552890 CHRDL2Q6WN34 429 aa11.45□□□□□ -0.58
TRAFD1-208ENST00000552890 FERMT3Q86UX7 667 aa11.45□□□□□ -0.58
TRAFD1-208ENST00000552890 C4orf32Q8N8J7 132 aa11.45□□□□□ -0.58
TRAFD1-208ENST00000552890 BANK1Q8NDB2 785 aa11.45□□□□□ -0.58
TRAFD1-208ENST00000552890 SNX29Q8TEQ0 813 aa11.45□□□□□ -0.58
TRAFD1-208ENST00000552890 PSPC1Q8WXF1 523 aaKnown RBP11.45□□□□□ -0.58
TRAFD1-208ENST00000552890 HERVK_113Q902F9 699 aa11.45□□□□□ -0.58
TRAFD1-208ENST00000552890 DYDC2Q96IM9 177 aa11.45□□□□□ -0.58
TRAFD1-208ENST00000552890 RNPC3Q96LT9 517 aaKnown RBP11.45□□□□□ -0.58
TRAFD1-208ENST00000552890 SCLT1Q96NL6 688 aa11.45□□□□□ -0.58
TRAFD1-208ENST00000552890 CELF4Q9BZC1 486 aaKnown RBP11.45□□□□□ -0.58
TRAFD1-208ENST00000552890 LRRC27Q9C0I9 530 aa11.45□□□□□ -0.58
TRAFD1-208ENST00000552890 TMEM60Q9H2L4 133 aa11.45□□□□□ -0.58
TRAFD1-208ENST00000552890 C17orf75Q9HAS0 396 aa11.45□□□□□ -0.58
TRAFD1-208ENST00000552890 CIZ1Q9ULV3 898 aaPredicted RBP11.45□□□□□ -0.58
TRAFD1-208ENST00000552890 AKT3Q9Y243 479 aa11.45□□□□□ -0.58
TRAFD1-208ENST00000552890 SRPRBQ9Y5M8 271 aaKnown RBP11.45□□□□□ -0.58
TRAFD1-208ENST00000552890 TRPV2Q9Y5S1 764 aa11.45□□□□□ -0.58
TRAFD1-208ENST00000552890 DOCK5Q9H7D0 1870 aa11.44□□□□□ -0.58
TRAFD1-208ENST00000552890 TMEM265A0A087WTH1 108 aa11.44□□□□□ -0.58
TRAFD1-208ENST00000552890 IGKV6-21A0A0C4DH24 114 aa11.44□□□□□ -0.58
TRAFD1-208ENST00000552890 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.44□□□□□ -0.58
TRAFD1-208ENST00000552890 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.44□□□□□ -0.58
TRAFD1-208ENST00000552890 ARHGEF35A5YM69 484 aa11.44□□□□□ -0.58
TRAFD1-208ENST00000552890 PPP6R2O75170 966 aa11.44□□□□□ -0.58
TRAFD1-208ENST00000552890 F13A1P00488 732 aa11.44□□□□□ -0.58
TRAFD1-208ENST00000552890 ATP4AP20648 1035 aa11.44□□□□□ -0.58
TRAFD1-208ENST00000552890 NASPP49321 788 aaPredicted RBP11.44□□□□□ -0.58
TRAFD1-208ENST00000552890 CCL23P55773 120 aa11.44□□□□□ -0.58
TRAFD1-208ENST00000552890 KRT85P78386 507 aa11.44□□□□□ -0.58
TRAFD1-208ENST00000552890 CYP4A11Q02928 519 aa11.44□□□□□ -0.58
TRAFD1-208ENST00000552890 CSPP1Q1MSJ5 1256 aa11.44□□□□□ -0.58
TRAFD1-208ENST00000552890 TRIM71Q2Q1W2 868 aaKnown RBP11.44□□□□□ -0.58
TRAFD1-208ENST00000552890 MTERF2Q49AM1 385 aa11.44□□□□□ -0.58
TRAFD1-208ENST00000552890 ZNF618Q5T7W0 954 aa11.44□□□□□ -0.58
TRAFD1-208ENST00000552890 TSHZ1Q6ZSZ6 1077 aa11.44□□□□□ -0.58
TRAFD1-208ENST00000552890 APBB1IPQ7Z5R6 666 aaPredicted RBP11.44□□□□□ -0.58
TRAFD1-208ENST00000552890 CATSPER3Q86XQ3 398 aa11.44□□□□□ -0.58
TRAFD1-208ENST00000552890 KRI1Q8N9T8 703 aaKnown RBP11.44□□□□□ -0.58
TRAFD1-208ENST00000552890 DNAJB3Q8WWF6 145 aa11.44□□□□□ -0.58
TRAFD1-208ENST00000552890 SLC9A7Q96T83 725 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms