RNA–Protein interactions for RNA: ENST00000552620.1

CHMP4A-210, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 716 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-210ENST00000552620 GOLGA8FQ08AF8 430 aa6.71□□□□□ -1.34
CHMP4A-210ENST00000552620 GOLGA8DPQ0D2H9 430 aa6.71□□□□□ -1.34
CHMP4A-210ENST00000552620 MPP2Q14168 576 aa6.71□□□□□ -1.34
CHMP4A-210ENST00000552620 ZNF174Q15697 407 aa6.71□□□□□ -1.34
CHMP4A-210ENST00000552620 ZNF658Q5TYW1 1059 aaPredicted RBP6.71□□□□□ -1.34
CHMP4A-210ENST00000552620 CTR9Q6PD62 1173 aa6.71□□□□□ -1.34
CHMP4A-210ENST00000552620 TOGARAM2Q6ZUX3 1019 aa6.71□□□□□ -1.34
CHMP4A-210ENST00000552620 USP49Q70CQ1 688 aa6.71□□□□□ -1.34
CHMP4A-210ENST00000552620 SRGAP1Q7Z6B7 1085 aa6.71□□□□□ -1.34
CHMP4A-210ENST00000552620 IL22RA1Q8N6P7 574 aa6.71□□□□□ -1.34
CHMP4A-210ENST00000552620 MIGA1Q8NAN2 632 aa6.71□□□□□ -1.34
CHMP4A-210ENST00000552620 LRRN4CLQ8ND94 238 aa6.71□□□□□ -1.34
CHMP4A-210ENST00000552620 HNRNPLLQ8WVV9 542 aaKnown RBP6.71□□□□□ -1.34
CHMP4A-210ENST00000552620 GATAD2BQ8WXI9 593 aa6.71□□□□□ -1.34
CHMP4A-210ENST00000552620 ANKS1AQ92625 1134 aa6.71□□□□□ -1.34
CHMP4A-210ENST00000552620 WNT8BQ93098 351 aa6.71□□□□□ -1.34
CHMP4A-210ENST00000552620 SYTL4Q96C24 671 aaPredicted RBP6.71□□□□□ -1.34
CHMP4A-210ENST00000552620 EPSTI1Q96J88 318 aa6.71□□□□□ -1.34
CHMP4A-210ENST00000552620 MED15Q96RN5 788 aa6.71□□□□□ -1.34
CHMP4A-210ENST00000552620 WDR24Q96S15 920 aa6.71□□□□□ -1.34
CHMP4A-210ENST00000552620 LRRC3Q9BY71 257 aa6.71□□□□□ -1.34
CHMP4A-210ENST00000552620 CRNKL1Q9BZJ0 848 aaKnown RBP6.71□□□□□ -1.34
CHMP4A-210ENST00000552620 UBXN6Q9BZV1 441 aa6.71□□□□□ -1.34
CHMP4A-210ENST00000552620 ANKRD2Q9GZV1 360 aa6.71□□□□□ -1.34
CHMP4A-210ENST00000552620 SOX17Q9H6I2 414 aaPredicted RBP6.71□□□□□ -1.34
CHMP4A-210ENST00000552620 ARFGAP3Q9NP61 516 aa6.71□□□□□ -1.34
CHMP4A-210ENST00000552620 VPS54Q9P1Q0 977 aa6.71□□□□□ -1.34
CHMP4A-210ENST00000552620 ABCF2Q9UG63 623 aa6.71□□□□□ -1.34
CHMP4A-210ENST00000552620 CDC23Q9UJX2 597 aa6.71□□□□□ -1.34
CHMP4A-210ENST00000552620 ZHX1Q9UKY1 873 aaPredicted RBP6.71□□□□□ -1.34
CHMP4A-210ENST00000552620 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.71□□□□□ -1.34
CHMP4A-210ENST00000552620 ECM29Q5VYK3 1845 aa6.71□□□□□ -1.34
CHMP4A-210ENST00000552620 COL14A1Q05707 1796 aaKnown RBP6.7□□□□□ -1.34
CHMP4A-210ENST00000552620 A0A087X0B3 334 aa6.7□□□□□ -1.34
CHMP4A-210ENST00000552620 CCDC151A5D8V7 595 aa6.7□□□□□ -1.34
CHMP4A-210ENST00000552620 SNAP23O00161 211 aa6.7□□□□□ -1.34
CHMP4A-210ENST00000552620 TEX33O43247 280 aa6.7□□□□□ -1.34
CHMP4A-210ENST00000552620 LILRB5O75023 590 aa6.7□□□□□ -1.34
CHMP4A-210ENST00000552620 MFAP3LO75121 409 aa6.7□□□□□ -1.34
CHMP4A-210ENST00000552620 SCG2P13521 617 aa6.7□□□□□ -1.34
CHMP4A-210ENST00000552620 HOXA7P31268 230 aaPredicted RBP6.7□□□□□ -1.34
CHMP4A-210ENST00000552620 CYP2C19P33261 490 aa6.7□□□□□ -1.34
CHMP4A-210ENST00000552620 PPP1R2P41236 205 aa6.7□□□□□ -1.34
CHMP4A-210ENST00000552620 HSPA2P54652 639 aa6.7□□□□□ -1.34
CHMP4A-210ENST00000552620 PIP4K2BP78356 416 aa6.7□□□□□ -1.34
CHMP4A-210ENST00000552620 PAK1Q13153 545 aa6.7□□□□□ -1.34
CHMP4A-210ENST00000552620 GPS2Q13227 327 aa6.7□□□□□ -1.34
CHMP4A-210ENST00000552620 KCNB1Q14721 858 aa6.7□□□□□ -1.34
CHMP4A-210ENST00000552620 NPY5RQ15761 445 aa6.7□□□□□ -1.34
CHMP4A-210ENST00000552620 PFKFB3Q16875 520 aaPredicted RBP6.7□□□□□ -1.34
CHMP4A-210ENST00000552620 ZNF827Q17R98 1081 aa6.7□□□□□ -1.34
CHMP4A-210ENST00000552620 WHAMMP3Q1A5X7 153 aa6.7□□□□□ -1.34
CHMP4A-210ENST00000552620 RRAGBQ5VZM2 374 aa6.7□□□□□ -1.34
CHMP4A-210ENST00000552620 SPTY2D1Q68D10 685 aaPredicted RBP6.7□□□□□ -1.34
CHMP4A-210ENST00000552620 KLHL10Q6JEL2 608 aa6.7□□□□□ -1.34
CHMP4A-210ENST00000552620 CC2D1AQ6P1N0 951 aaPredicted RBP6.7□□□□□ -1.34
CHMP4A-210ENST00000552620 ADAMTSL4Q6UY14 1074 aa6.7□□□□□ -1.34
CHMP4A-210ENST00000552620 CYP26C1Q6V0L0 522 aa6.7□□□□□ -1.34
CHMP4A-210ENST00000552620 BNC2Q6ZN30 1099 aaPredicted RBP6.7□□□□□ -1.34
CHMP4A-210ENST00000552620 ZNF662Q6ZS27 426 aa6.7□□□□□ -1.34
CHMP4A-210ENST00000552620 ADGRA1Q86SQ6 560 aa6.7□□□□□ -1.34
CHMP4A-210ENST00000552620 DGKHQ86XP1 1220 aa6.7□□□□□ -1.34
CHMP4A-210ENST00000552620 SLITRK4Q8IW52 837 aa6.7□□□□□ -1.34
CHMP4A-210ENST00000552620 GRAMD1CQ8IYS0 662 aa6.7□□□□□ -1.34
CHMP4A-210ENST00000552620 ZSCAN1Q8NBB4 408 aa6.7□□□□□ -1.34
CHMP4A-210ENST00000552620 CCDC12Q8WUD4 166 aaPredicted RBP6.7□□□□□ -1.34
CHMP4A-210ENST00000552620 SDR42E1Q8WUS8 393 aa6.7□□□□□ -1.34
CHMP4A-210ENST00000552620 LZTS2Q9BRK4 669 aa6.7□□□□□ -1.34
CHMP4A-210ENST00000552620 PARD6BQ9BYG5 372 aa6.7□□□□□ -1.34
CHMP4A-210ENST00000552620 GBP3Q9H0R5 595 aa6.7□□□□□ -1.34
CHMP4A-210ENST00000552620 MAGEF1Q9HAY2 307 aa6.7□□□□□ -1.34
CHMP4A-210ENST00000552620 CALCOCO1Q9P1Z2 691 aa6.7□□□□□ -1.34
CHMP4A-210ENST00000552620 ARPP21Q9UBL0 812 aaPredicted RBP6.7□□□□□ -1.34
CHMP4A-210ENST00000552620 RAB21Q9UL25 225 aa6.7□□□□□ -1.34
CHMP4A-210ENST00000552620 PCDHB5Q9Y5E4 795 aa6.7□□□□□ -1.34
CHMP4A-210ENST00000552620 NHSL1Q5SYE7 1610 aa6.69□□□□□ -1.34
CHMP4A-210ENST00000552620 BCL9LQ86UU0 1499 aa6.69□□□□□ -1.34
CHMP4A-210ENST00000552620 A0A1W2PQC6 194 aa6.69□□□□□ -1.34
CHMP4A-210ENST00000552620 CTAGE9A4FU28 777 aa6.69□□□□□ -1.34
CHMP4A-210ENST00000552620 LAD1O00515 517 aa6.69□□□□□ -1.34
CHMP4A-210ENST00000552620 SOX1O00570 391 aaPredicted RBP6.69□□□□□ -1.34
CHMP4A-210ENST00000552620 N4BP3O15049 544 aa6.69□□□□□ -1.34
CHMP4A-210ENST00000552620 FANCGO15287 622 aa6.69□□□□□ -1.34
CHMP4A-210ENST00000552620 ERLIN1O75477 346 aa6.69□□□□□ -1.34
CHMP4A-210ENST00000552620 PLEKHA8P1O95397 391 aa6.69□□□□□ -1.34
CHMP4A-210ENST00000552620 CYP11A1P05108 521 aa6.69□□□□□ -1.34
CHMP4A-210ENST00000552620 LORP23490 312 aaPredicted RBP6.69□□□□□ -1.34
CHMP4A-210ENST00000552620 HIBADHP31937 336 aaKnown RBP6.69□□□□□ -1.34
CHMP4A-210ENST00000552620 GYG1P46976 350 aa6.69□□□□□ -1.34
CHMP4A-210ENST00000552620 COPB1P53618 953 aaKnown RBP6.69□□□□□ -1.34
CHMP4A-210ENST00000552620 CHMP4BP1P59074 171 aa6.69□□□□□ -1.34
CHMP4A-210ENST00000552620 GSTM4Q03013 218 aa6.69□□□□□ -1.34
CHMP4A-210ENST00000552620 STIM1Q13586 685 aa6.69□□□□□ -1.34
CHMP4A-210ENST00000552620 SEPT6Q14141 434 aa6.69□□□□□ -1.34
CHMP4A-210ENST00000552620 DDB1Q16531 1140 aa6.69□□□□□ -1.34
CHMP4A-210ENST00000552620 KIF4BQ2VIQ3 1234 aa6.69□□□□□ -1.34
CHMP4A-210ENST00000552620 SEZ6Q53EL9 994 aa6.69□□□□□ -1.34
CHMP4A-210ENST00000552620 TCP11X2Q5H9J9 407 aa6.69□□□□□ -1.34
CHMP4A-210ENST00000552620 EARS2Q5JPH6 523 aaKnown RBP6.69□□□□□ -1.34
CHMP4A-210ENST00000552620 ZNF569Q5MCW4 686 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms