RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 HPSEQ9Y251 543 aa11.72□□□□□ -0.53
TGFBR1-209ENST00000552516 MCM3P25205 808 aa11.72□□□□□ -0.53
TGFBR1-209ENST00000552516 ERVK-24P63145 666 aa11.72□□□□□ -0.53
TGFBR1-209ENST00000552516 CYP4F22Q6NT55 531 aa11.72□□□□□ -0.53
TGFBR1-209ENST00000552516 THAP9Q9H5L6 903 aa11.72□□□□□ -0.53
TGFBR1-209ENST00000552516 ACP6Q9NPH0 428 aa11.72□□□□□ -0.53
TGFBR1-209ENST00000552516 LIMA1Q9UHB6 759 aaKnown RBP11.72□□□□□ -0.53
TGFBR1-209ENST00000552516 ANAPC4Q9UJX5 808 aa11.72□□□□□ -0.53
TGFBR1-209ENST00000552516 CEP83Q9Y592 693 aa11.72□□□□□ -0.53
TGFBR1-209ENST00000552516 FHOD1Q9Y613 1164 aa11.72□□□□□ -0.53
TGFBR1-209ENST00000552516 SPATA31A6Q5VVP1 1343 aa11.72□□□□□ -0.53
TGFBR1-209ENST00000552516 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.72□□□□□ -0.53
TGFBR1-209ENST00000552516 K7ERI5 159 aa11.72□□□□□ -0.53
TGFBR1-209ENST00000552516 MSH4O15457 936 aa11.72□□□□□ -0.53
TGFBR1-209ENST00000552516 PRELPP51888 382 aa11.72□□□□□ -0.53
TGFBR1-209ENST00000552516 DCAF4Q8WV16 495 aa11.72□□□□□ -0.53
TGFBR1-209ENST00000552516 MPHOSPH6Q99547 160 aaKnown RBP11.72□□□□□ -0.53
TGFBR1-209ENST00000552516 EXOC7Q9UPT5 735 aa11.72□□□□□ -0.53
TGFBR1-209ENST00000552516 KNOP1Q1ED39 458 aaKnown RBP11.71□□□□□ -0.53
TGFBR1-209ENST00000552516 ZNF365Q70YC5 407 aa11.71□□□□□ -0.53
TGFBR1-209ENST00000552516 CTNNA1P35221 906 aaKnown RBP11.71□□□□□ -0.53
TGFBR1-209ENST00000552516 PACSIN1Q9BY11 444 aa11.71□□□□□ -0.53
TGFBR1-209ENST00000552516 LACRTQ9GZZ8 138 aa11.71□□□□□ -0.53
TGFBR1-209ENST00000552516 UTP11Q9Y3A2 253 aaKnown RBP11.71□□□□□ -0.53
TGFBR1-209ENST00000552516 EMSYQ7Z589 1322 aa11.71□□□□□ -0.53
TGFBR1-209ENST00000552516 FAM86B1E9PN63 330 aa11.71□□□□□ -0.53
TGFBR1-209ENST00000552516 TBC1D8O95759 1140 aa11.71□□□□□ -0.53
TGFBR1-209ENST00000552516 FAM86B2P0C5J1 330 aa11.71□□□□□ -0.53
TGFBR1-209ENST00000552516 DRAP1Q14919 205 aaPredicted RBP11.71□□□□□ -0.53
TGFBR1-209ENST00000552516 PLCD3Q8N3E9 789 aa11.71□□□□□ -0.53
TGFBR1-209ENST00000552516 NLRP7Q8WX94 980 aa11.71□□□□□ -0.53
TGFBR1-209ENST00000552516 KIFAP3Q92845 792 aa11.71□□□□□ -0.53
TGFBR1-209ENST00000552516 RNF34Q969K3 372 aa11.71□□□□□ -0.53
TGFBR1-209ENST00000552516 ACSF2Q96CM8 615 aaPredicted RBP11.71□□□□□ -0.53
TGFBR1-209ENST00000552516 NDUFAB1O14561 156 aa11.71□□□□□ -0.54
TGFBR1-209ENST00000552516 TM4SF1P30408 202 aa11.71□□□□□ -0.54
TGFBR1-209ENST00000552516 AFAP1L1Q8TED9 768 aa11.71□□□□□ -0.54
TGFBR1-209ENST00000552516 PDE6CP51160 858 aa11.71□□□□□ -0.54
TGFBR1-209ENST00000552516 OTUD6BQ8N6M0 293 aa11.71□□□□□ -0.54
TGFBR1-209ENST00000552516 MAGOHBQ96A72 148 aaKnown RBP11.71□□□□□ -0.54
TGFBR1-209ENST00000552516 SLC10A4Q96EP9 437 aa11.71□□□□□ -0.54
TGFBR1-209ENST00000552516 SEMA6BQ9H3T3 888 aa11.71□□□□□ -0.54
TGFBR1-209ENST00000552516 FAM204AQ9H8W3 233 aa11.71□□□□□ -0.54
TGFBR1-209ENST00000552516 TTC7AQ9ULT0 858 aaPredicted RBP11.71□□□□□ -0.54
TGFBR1-209ENST00000552516 A0A1B0GTH6 734 aa11.7□□□□□ -0.54
TGFBR1-209ENST00000552516 ZNF710Q8N1W2 664 aa11.7□□□□□ -0.54
TGFBR1-209ENST00000552516 CCDC51Q96ER9 411 aa11.7□□□□□ -0.54
TGFBR1-209ENST00000552516 BTBD6Q96KE9 485 aa11.7□□□□□ -0.54
TGFBR1-209ENST00000552516 KCNH7Q9NS40 1196 aa11.7□□□□□ -0.54
TGFBR1-209ENST00000552516 MON2Q7Z3U7 1717 aa11.7□□□□□ -0.54
TGFBR1-209ENST00000552516 FAM198AQ9UFP1 575 aa11.7□□□□□ -0.54
TGFBR1-209ENST00000552516 GOLGA8MH3BSY2 632 aa11.7□□□□□ -0.54
TGFBR1-209ENST00000552516 PPP4CP60510 307 aa11.7□□□□□ -0.54
TGFBR1-209ENST00000552516 VSNL1P62760 191 aa11.7□□□□□ -0.54
TGFBR1-209ENST00000552516 LACTBP83111 547 aaPredicted RBP11.7□□□□□ -0.54
TGFBR1-209ENST00000552516 FAM182AQ5T1J6 154 aa11.7□□□□□ -0.54
TGFBR1-209ENST00000552516 CASC4Q6P4E1 433 aa11.7□□□□□ -0.54
TGFBR1-209ENST00000552516 DDX42Q86XP3 938 aaKnown RBP eCLIP11.7□□□□□ -0.54
TGFBR1-209ENST00000552516 CYP26A1O43174 497 aa11.7□□□□□ -0.54
TGFBR1-209ENST00000552516 FGGP02679 453 aa11.7□□□□□ -0.54
TGFBR1-209ENST00000552516 PPP1R2P41236 205 aa11.7□□□□□ -0.54
TGFBR1-209ENST00000552516 CCDC33Q8N5R6 958 aa11.7□□□□□ -0.54
TGFBR1-209ENST00000552516 PANX2Q96RD6 677 aa11.7□□□□□ -0.54
TGFBR1-209ENST00000552516 C11orf70Q9BRQ4 267 aa11.7□□□□□ -0.54
TGFBR1-209ENST00000552516 PARP2Q9UGN5 583 aa11.7□□□□□ -0.54
TGFBR1-209ENST00000552516 DENND2CQ68D51 928 aa11.7□□□□□ -0.54
TGFBR1-209ENST00000552516 TMEM270Q6UE05 265 aa11.7□□□□□ -0.54
TGFBR1-209ENST00000552516 IKBKGQ9Y6K9 419 aa11.7□□□□□ -0.54
TGFBR1-209ENST00000552516 EML1O00423 815 aa11.69□□□□□ -0.54
TGFBR1-209ENST00000552516 IFT20Q8IY31 132 aa11.69□□□□□ -0.54
TGFBR1-209ENST00000552516 FAM149B1Q96BN6 582 aa11.69□□□□□ -0.54
TGFBR1-209ENST00000552516 MSTO1Q9BUK6 570 aa11.69□□□□□ -0.54
TGFBR1-209ENST00000552516 MAK16Q9BXY0 300 aaKnown RBP11.69□□□□□ -0.54
TGFBR1-209ENST00000552516 RNF225M0QZC1 329 aaPredicted RBP11.69□□□□□ -0.54
TGFBR1-209ENST00000552516 WNT10BO00744 389 aa11.69□□□□□ -0.54
TGFBR1-209ENST00000552516 MAP3K6O95382 1288 aa11.69□□□□□ -0.54
TGFBR1-209ENST00000552516 ADCY8P40145 1251 aa11.69□□□□□ -0.54
TGFBR1-209ENST00000552516 HAUS6Q7Z4H7 955 aa11.69□□□□□ -0.54
TGFBR1-209ENST00000552516 NT5C1BQ96P26 610 aa11.69□□□□□ -0.54
TGFBR1-209ENST00000552516 CUEDC2Q9H467 287 aa11.69□□□□□ -0.54
TGFBR1-209ENST00000552516 ZWILCHQ9H900 591 aa11.69□□□□□ -0.54
TGFBR1-209ENST00000552516 TOPORSQ9NS56 1045 aaPredicted RBP11.69□□□□□ -0.54
TGFBR1-209ENST00000552516 MTUS1Q9ULD2 1270 aa11.69□□□□□ -0.54
TGFBR1-209ENST00000552516 E7EVH7 732 aa11.69□□□□□ -0.54
TGFBR1-209ENST00000552516 N4BP1O75113 896 aaKnown RBP11.69□□□□□ -0.54
TGFBR1-209ENST00000552516 SUPT20HL1Q3ZLR7 823 aa11.69□□□□□ -0.54
TGFBR1-209ENST00000552516 HHIPL2Q6UWX4 724 aa11.69□□□□□ -0.54
TGFBR1-209ENST00000552516 VCPKMTQ9H867 229 aa11.69□□□□□ -0.54
TGFBR1-209ENST00000552516 SEPT10Q9P0V9 454 aa11.69□□□□□ -0.54
TGFBR1-209ENST00000552516 SNX24Q9Y343 169 aa11.69□□□□□ -0.54
TGFBR1-209ENST00000552516 NALCNQ8IZF0 1738 aa11.69□□□□□ -0.54
TGFBR1-209ENST00000552516 YWHABP31946 246 aaKnown RBP11.69□□□□□ -0.54
TGFBR1-209ENST00000552516 ARL1P40616 181 aaPredicted RBP11.69□□□□□ -0.54
TGFBR1-209ENST00000552516 CASP5P51878 434 aa11.69□□□□□ -0.54
TGFBR1-209ENST00000552516 TRIM50Q86XT4 487 aa11.69□□□□□ -0.54
TGFBR1-209ENST00000552516 UBL4BQ8N7F7 174 aa11.69□□□□□ -0.54
TGFBR1-209ENST00000552516 KIAA0895Q8NCT3 520 aa11.69□□□□□ -0.54
TGFBR1-209ENST00000552516 CCDC26Q8TAB7 109 aa11.69□□□□□ -0.54
TGFBR1-209ENST00000552516 ATP6V0A1Q93050 837 aa11.69□□□□□ -0.54
TGFBR1-209ENST00000552516 ACCSQ96QU6 501 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms