RNA–Protein interactions for RNA: ENST00000552483.5

CNOT2-239, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 895 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-239ENST00000552483 PCDHA12Q9UN75 941 aa12.21□□□□□ -0.45
CNOT2-239ENST00000552483 PCDHA2Q9Y5H9 948 aa12.21□□□□□ -0.45
CNOT2-239ENST00000552483 A0A087WWV3 80 aa12.2□□□□□ -0.46
CNOT2-239ENST00000552483 RSPH10B2B2RC85 870 aa12.2□□□□□ -0.46
CNOT2-239ENST00000552483 RSPH10BP0C881 870 aa12.2□□□□□ -0.46
CNOT2-239ENST00000552483 RFC2P35250 354 aa12.2□□□□□ -0.46
CNOT2-239ENST00000552483 TECP42680 631 aa12.2□□□□□ -0.46
CNOT2-239ENST00000552483 CLCN3P51790 818 aa12.2□□□□□ -0.46
CNOT2-239ENST00000552483 PSMC5P62195 406 aa12.2□□□□□ -0.46
CNOT2-239ENST00000552483 C1QBPQ07021 282 aaKnown RBP12.2□□□□□ -0.46
CNOT2-239ENST00000552483 PTGDRQ13258 359 aa12.2□□□□□ -0.46
CNOT2-239ENST00000552483 ORC2Q13416 577 aaPredicted RBP12.2□□□□□ -0.46
CNOT2-239ENST00000552483 DRP2Q13474 957 aa12.2□□□□□ -0.46
CNOT2-239ENST00000552483 MTERF2Q49AM1 385 aa12.2□□□□□ -0.46
CNOT2-239ENST00000552483 TAF2Q6P1X5 1199 aa12.2□□□□□ -0.46
CNOT2-239ENST00000552483 PSRC1Q6PGN9 363 aaPredicted RBP12.2□□□□□ -0.46
CNOT2-239ENST00000552483 RPAINQ86UA6 219 aa12.2□□□□□ -0.46
CNOT2-239ENST00000552483 HERVK_113Q902F9 699 aa12.2□□□□□ -0.46
CNOT2-239ENST00000552483 FAM167AQ96KS9 214 aa12.2□□□□□ -0.46
CNOT2-239ENST00000552483 PPP1R16BQ96T49 567 aa12.2□□□□□ -0.46
CNOT2-239ENST00000552483 FTOQ9C0B1 505 aaKnown RBP eCLIP12.2□□□□□ -0.46
CNOT2-239ENST00000552483 CDHR5Q9HBB8 845 aa12.2□□□□□ -0.46
CNOT2-239ENST00000552483 CDY2AQ9Y6F7 541 aa12.2□□□□□ -0.46
CNOT2-239ENST00000552483 SMIM35A0A1B0GVV1 85 aa12.19□□□□□ -0.46
CNOT2-239ENST00000552483 GRXCR1A8MXD5 290 aa12.19□□□□□ -0.46
CNOT2-239ENST00000552483 CAND2O75155 1236 aa12.19□□□□□ -0.46
CNOT2-239ENST00000552483 MED24O75448 989 aa12.19□□□□□ -0.46
CNOT2-239ENST00000552483 SLITRK3O94933 977 aa12.19□□□□□ -0.46
CNOT2-239ENST00000552483 FGBP02675 491 aa12.19□□□□□ -0.46
CNOT2-239ENST00000552483 P4HBP07237 508 aaKnown RBP12.19□□□□□ -0.46
CNOT2-239ENST00000552483 SPATA31C1P0DKV0 1188 aa12.19□□□□□ -0.46
CNOT2-239ENST00000552483 QARSP47897 775 aaKnown RBP12.19□□□□□ -0.46
CNOT2-239ENST00000552483 NPEPPSP55786 919 aa12.19□□□□□ -0.46
CNOT2-239ENST00000552483 MRPS6P82932 125 aaKnown RBP12.19□□□□□ -0.46
CNOT2-239ENST00000552483 MKRN4PQ13434 485 aaPredicted RBP12.19□□□□□ -0.46
CNOT2-239ENST00000552483 LRIT3Q3SXY7 679 aa12.19□□□□□ -0.46
CNOT2-239ENST00000552483 RILPL1Q5EBL4 403 aa12.19□□□□□ -0.46
CNOT2-239ENST00000552483 XKR3Q5GH77 459 aa12.19□□□□□ -0.46
CNOT2-239ENST00000552483 KIAA0319LQ8IZA0 1049 aa12.19□□□□□ -0.46
CNOT2-239ENST00000552483 LRRC71Q8N4P6 559 aa12.19□□□□□ -0.46
CNOT2-239ENST00000552483 HSD17B14Q9BPX1 270 aa12.19□□□□□ -0.46
CNOT2-239ENST00000552483 NIFKQ9BYG3 293 aaKnown RBP12.19□□□□□ -0.46
CNOT2-239ENST00000552483 DDX11L8A8MPP1 907 aa12.18□□□□□ -0.46
CNOT2-239ENST00000552483 PP2D1A8MPX8 630 aa12.18□□□□□ -0.46
CNOT2-239ENST00000552483 STX6O43752 255 aa12.18□□□□□ -0.46
CNOT2-239ENST00000552483 VTNP04004 478 aa12.18□□□□□ -0.46
CNOT2-239ENST00000552483 GHRP10912 638 aa12.18□□□□□ -0.46
CNOT2-239ENST00000552483 ATP2C1P98194 919 aaPredicted RBP12.18□□□□□ -0.46
CNOT2-239ENST00000552483 PKP1Q13835 747 aa12.18□□□□□ -0.46
CNOT2-239ENST00000552483 LPIN1Q14693 890 aa12.18□□□□□ -0.46
CNOT2-239ENST00000552483 ECM1Q16610 540 aa12.18□□□□□ -0.46
CNOT2-239ENST00000552483 TPH2Q8IWU9 490 aa12.18□□□□□ -0.46
CNOT2-239ENST00000552483 C4orf19Q8IY42 314 aa12.18□□□□□ -0.46
CNOT2-239ENST00000552483 RPUSD2Q8IZ73 545 aaKnown RBP12.18□□□□□ -0.46
CNOT2-239ENST00000552483 DBF4BQ8NFT6 615 aa12.18□□□□□ -0.46
CNOT2-239ENST00000552483 ZNF668Q96K58 619 aaPredicted RBP12.18□□□□□ -0.46
CNOT2-239ENST00000552483 AGO3Q9H9G7 860 aaKnown RBP12.18□□□□□ -0.46
CNOT2-239ENST00000552483 NRBP2Q9NSY0 501 aa12.18□□□□□ -0.46
CNOT2-239ENST00000552483 BMP2KQ9NSY1 1161 aaPredicted RBP12.18□□□□□ -0.46
CNOT2-239ENST00000552483 TRPV2Q9Y5S1 764 aa12.18□□□□□ -0.46
CNOT2-239ENST00000552483 IGKV6-21A0A0C4DH24 114 aa12.17□□□□□ -0.46
CNOT2-239ENST00000552483 ZBBXA8MT70 800 aa12.17□□□□□ -0.46
CNOT2-239ENST00000552483 LYPLA2O95372 231 aa12.17□□□□□ -0.46
CNOT2-239ENST00000552483 PFKMP08237 780 aa12.17□□□□□ -0.46
CNOT2-239ENST00000552483 PDCP20941 246 aa12.17□□□□□ -0.46
CNOT2-239ENST00000552483 FXR2P51116 673 aaKnown RBP eCLIP12.17□□□□□ -0.46
CNOT2-239ENST00000552483 DEFB103AP81534 67 aa12.17□□□□□ -0.46
CNOT2-239ENST00000552483 GRIN1Q05586 938 aa12.17□□□□□ -0.46
CNOT2-239ENST00000552483 PLEKHG4Q58EX7 1191 aa12.17□□□□□ -0.46
CNOT2-239ENST00000552483 FBXO47Q5MNV8 452 aa12.17□□□□□ -0.46
CNOT2-239ENST00000552483 FOXD4L5Q5VV16 416 aaPredicted RBP12.17□□□□□ -0.46
CNOT2-239ENST00000552483 EFCAB12Q6NXP0 572 aa12.17□□□□□ -0.46
CNOT2-239ENST00000552483 CNKSR3Q6P9H4 555 aa12.17□□□□□ -0.46
CNOT2-239ENST00000552483 BRAPQ7Z569 592 aa12.17□□□□□ -0.46
CNOT2-239ENST00000552483 TMCO2Q7Z6W1 182 aaPredicted RBP12.17□□□□□ -0.46
CNOT2-239ENST00000552483 CATSPER3Q86XQ3 398 aa12.17□□□□□ -0.46
CNOT2-239ENST00000552483 TMEM40Q8WWA1 233 aa12.17□□□□□ -0.46
CNOT2-239ENST00000552483 FOXD4L4Q8WXT5 416 aaPredicted RBP12.17□□□□□ -0.46
CNOT2-239ENST00000552483 TNPO1Q92973 898 aaKnown RBP12.17□□□□□ -0.46
CNOT2-239ENST00000552483 CYP26B1Q9NR63 512 aa12.17□□□□□ -0.46
CNOT2-239ENST00000552483 CEP131Q9UPN4 1083 aa12.17□□□□□ -0.46
CNOT2-239ENST00000552483 MAGEB2O15479 319 aa12.16□□□□□ -0.46
CNOT2-239ENST00000552483 CDC25AP30304 524 aa12.16□□□□□ -0.46
CNOT2-239ENST00000552483 YWHABP31946 246 aaKnown RBP12.16□□□□□ -0.46
CNOT2-239ENST00000552483 PBX2P40425 430 aa12.16□□□□□ -0.46
CNOT2-239ENST00000552483 WDR5P61964 334 aaKnown RBP12.16□□□□□ -0.46
CNOT2-239ENST00000552483 TBC1D8BQ0IIM8 1120 aa12.16□□□□□ -0.46
CNOT2-239ENST00000552483 PTPAQ15257 358 aa12.16□□□□□ -0.46
CNOT2-239ENST00000552483 SF3A1Q15459 793 aaKnown RBP12.16□□□□□ -0.46
CNOT2-239ENST00000552483 POTEGQ6S5H5 508 aa12.16□□□□□ -0.46
CNOT2-239ENST00000552483 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.16□□□□□ -0.461e-6■■■■■ 46
CNOT2-239ENST00000552483 METTL13Q8N6R0 699 aa12.16□□□□□ -0.46
CNOT2-239ENST00000552483 IGSF22Q8N9C0 903 aa12.16□□□□□ -0.46
CNOT2-239ENST00000552483 NEK9Q8TD19 979 aa12.16□□□□□ -0.46
CNOT2-239ENST00000552483 PIGOQ8TEQ8 1089 aa12.16□□□□□ -0.46
CNOT2-239ENST00000552483 LINC01599Q8WXQ3 324 aa12.16□□□□□ -0.46
CNOT2-239ENST00000552483 MMTAG2Q9BU76 263 aaKnown RBP12.16□□□□□ -0.46
CNOT2-239ENST00000552483 CELF4Q9BZC1 486 aaKnown RBP12.16□□□□□ -0.46
CNOT2-239ENST00000552483 ZSWIM4Q9H7M6 989 aa12.16□□□□□ -0.46
CNOT2-239ENST00000552483 SUGCTQ9HAC7 445 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms