RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 KIAA1217Q5T5P2 1943 aa11.92□□□□□ -0.5
PTCH1-225ENST00000551845 UMODL1Q5DID0 1318 aa11.91□□□□□ -0.5
PTCH1-225ENST00000551845 RSPH10B2B2RC85 870 aa11.91□□□□□ -0.5
PTCH1-225ENST00000551845 ZNF862O60290 1169 aa11.91□□□□□ -0.5
PTCH1-225ENST00000551845 CAND2O75155 1236 aa11.91□□□□□ -0.5
PTCH1-225ENST00000551845 SLITRK3O94933 977 aa11.91□□□□□ -0.5
PTCH1-225ENST00000551845 FGBP02675 491 aa11.91□□□□□ -0.5
PTCH1-225ENST00000551845 OATP04181 439 aa11.91□□□□□ -0.5
PTCH1-225ENST00000551845 RSPH10BP0C881 870 aa11.91□□□□□ -0.5
PTCH1-225ENST00000551845 EPHB4P54760 987 aa11.91□□□□□ -0.5
PTCH1-225ENST00000551845 RBL2Q08999 1139 aa11.91□□□□□ -0.5
PTCH1-225ENST00000551845 SPIRE1Q08AE8 756 aa11.91□□□□□ -0.5
PTCH1-225ENST00000551845 NBR1Q14596 966 aa11.91□□□□□ -0.5
PTCH1-225ENST00000551845 ZNF618Q5T7W0 954 aa11.91□□□□□ -0.5
PTCH1-225ENST00000551845 MTHFD1LQ6UB35 978 aa11.91□□□□□ -0.5
PTCH1-225ENST00000551845 DTHD1Q6ZMT9 781 aa11.91□□□□□ -0.5
PTCH1-225ENST00000551845 LRRC8DQ7L1W4 858 aa11.91□□□□□ -0.5
PTCH1-225ENST00000551845 RPAINQ86UA6 219 aa11.91□□□□□ -0.5
PTCH1-225ENST00000551845 FERMT3Q86UX7 667 aa11.91□□□□□ -0.5
PTCH1-225ENST00000551845 C4orf19Q8IY42 314 aa11.91□□□□□ -0.5
PTCH1-225ENST00000551845 ERMNQ8TAM6 284 aa11.91□□□□□ -0.5
PTCH1-225ENST00000551845 ADAMTS19Q8TE59 1207 aa11.91□□□□□ -0.5
PTCH1-225ENST00000551845 DHX38Q92620 1227 aaKnown RBP11.91□□□□□ -0.5
PTCH1-225ENST00000551845 TIFAQ96CG3 184 aa11.91□□□□□ -0.5
PTCH1-225ENST00000551845 UHRF1Q96T88 793 aaPredicted RBP11.91□□□□□ -0.5
PTCH1-225ENST00000551845 HSD17B14Q9BPX1 270 aa11.91□□□□□ -0.5
PTCH1-225ENST00000551845 EIF2AK1Q9BQI3 630 aaKnown RBP11.91□□□□□ -0.5
PTCH1-225ENST00000551845 NIFKQ9BYG3 293 aaKnown RBP11.91□□□□□ -0.5
PTCH1-225ENST00000551845 WNT8AQ9H1J5 351 aa11.91□□□□□ -0.5
PTCH1-225ENST00000551845 IL23AQ9NPF7 189 aa11.91□□□□□ -0.5
PTCH1-225ENST00000551845 MTMR6Q9Y217 621 aa11.91□□□□□ -0.5
PTCH1-225ENST00000551845 STK24Q9Y6E0 443 aa11.91□□□□□ -0.5
PTCH1-225ENST00000551845 COL1A2P08123 1366 aa11.91□□□□□ -0.5
PTCH1-225ENST00000551845 IGSF9BQ9UPX0 1349 aa11.9□□□□□ -0.5
PTCH1-225ENST00000551845 SMIM35A0A1B0GVV1 85 aa11.9□□□□□ -0.5
PTCH1-225ENST00000551845 PFKMP08237 780 aa11.9□□□□□ -0.5
PTCH1-225ENST00000551845 ACRP10323 421 aa11.9□□□□□ -0.5
PTCH1-225ENST00000551845 TMOD1P28289 359 aa11.9□□□□□ -0.5
PTCH1-225ENST00000551845 PRPHP41219 470 aa11.9□□□□□ -0.5
PTCH1-225ENST00000551845 MRPS5P82675 430 aaKnown RBP11.9□□□□□ -0.5
PTCH1-225ENST00000551845 PRKCEQ02156 737 aa11.9□□□□□ -0.5
PTCH1-225ENST00000551845 CTTNQ14247 550 aaKnown RBP11.9□□□□□ -0.5
PTCH1-225ENST00000551845 UGCGQ16739 394 aa11.9□□□□□ -0.5
PTCH1-225ENST00000551845 TRIM71Q2Q1W2 868 aaKnown RBP11.9□□□□□ -0.5
PTCH1-225ENST00000551845 IER5Q5VY09 327 aa11.9□□□□□ -0.5
PTCH1-225ENST00000551845 ZNF365Q70YC5 407 aa11.9□□□□□ -0.5
PTCH1-225ENST00000551845 DEFB128Q7Z7B8 93 aa11.9□□□□□ -0.5
PTCH1-225ENST00000551845 METTL13Q8N6R0 699 aa11.9□□□□□ -0.5
PTCH1-225ENST00000551845 NEK9Q8TD19 979 aa11.9□□□□□ -0.5
PTCH1-225ENST00000551845 TRAPPC12Q8WVT3 735 aa11.9□□□□□ -0.5
PTCH1-225ENST00000551845 DNAJB3Q8WWF6 145 aa11.9□□□□□ -0.5
PTCH1-225ENST00000551845 DYDC2Q96IM9 177 aa11.9□□□□□ -0.5
PTCH1-225ENST00000551845 ASB2Q96Q27 587 aa11.9□□□□□ -0.5
PTCH1-225ENST00000551845 FTOQ9C0B1 505 aaKnown RBP eCLIP11.9□□□□□ -0.5
PTCH1-225ENST00000551845 RGL1Q9NZL6 768 aa11.9□□□□□ -0.5
PTCH1-225ENST00000551845 LAMA2P24043 3122 aaKnown RBP11.89□□□□□ -0.51
PTCH1-225ENST00000551845 M0QZ92 97 aa11.89□□□□□ -0.51
PTCH1-225ENST00000551845 STBD1O95210 358 aa11.89□□□□□ -0.51
PTCH1-225ENST00000551845 BMP15O95972 392 aa11.89□□□□□ -0.51
PTCH1-225ENST00000551845 ACTN1P12814 892 aa11.89□□□□□ -0.51
PTCH1-225ENST00000551845 XRCC6P12956 609 aaKnown RBP eCLIP11.89□□□□□ -0.51
PTCH1-225ENST00000551845 YWHABP31946 246 aaKnown RBP11.89□□□□□ -0.51
PTCH1-225ENST00000551845 FXR2P51116 673 aaKnown RBP eCLIP11.89□□□□□ -0.51
PTCH1-225ENST00000551845 CYP4A11Q02928 519 aa11.89□□□□□ -0.51
PTCH1-225ENST00000551845 TBC1D8BQ0IIM8 1120 aa11.89□□□□□ -0.51
PTCH1-225ENST00000551845 CCDC85BQ15834 202 aaPredicted RBP11.89□□□□□ -0.51
PTCH1-225ENST00000551845 ARL6IP4Q66PJ3 421 aaKnown RBP11.89□□□□□ -0.51
PTCH1-225ENST00000551845 EFCAB12Q6NXP0 572 aa11.89□□□□□ -0.51
PTCH1-225ENST00000551845 PSRC1Q6PGN9 363 aaPredicted RBP11.89□□□□□ -0.51
PTCH1-225ENST00000551845 RUFY4Q6ZNE9 571 aa11.89□□□□□ -0.51
PTCH1-225ENST00000551845 C16orf59Q7L2K0 433 aa11.89□□□□□ -0.51
PTCH1-225ENST00000551845 EXOC8Q8IYI6 725 aa11.89□□□□□ -0.51
PTCH1-225ENST00000551845 WNT8BQ93098 351 aa11.89□□□□□ -0.51
PTCH1-225ENST00000551845 LXNQ9BS40 222 aa11.89□□□□□ -0.51
PTCH1-225ENST00000551845 FAM49AQ9H0Q0 323 aaPredicted RBP11.89□□□□□ -0.51
PTCH1-225ENST00000551845 SUGCTQ9HAC7 445 aa11.89□□□□□ -0.51
PTCH1-225ENST00000551845 LRWD1Q9UFC0 647 aa11.89□□□□□ -0.51
PTCH1-225ENST00000551845 SEPT9Q9UHD8 586 aaPredicted RBP11.89□□□□□ -0.51
PTCH1-225ENST00000551845 DNAH12Q6ZR08 3092 aa11.88□□□□□ -0.51
PTCH1-225ENST00000551845 PRUNE2Q8WUY3 3088 aa11.88□□□□□ -0.51
PTCH1-225ENST00000551845 POTEMA6NI47 508 aa11.88□□□□□ -0.51
PTCH1-225ENST00000551845 ZBTB42B2RXF5 422 aa11.88□□□□□ -0.51
PTCH1-225ENST00000551845 LYPLA2O95372 231 aa11.88□□□□□ -0.51
PTCH1-225ENST00000551845 DNM2P50570 870 aa11.88□□□□□ -0.51
PTCH1-225ENST00000551845 ATP2C1P98194 919 aaPredicted RBP11.88□□□□□ -0.51
PTCH1-225ENST00000551845 CDC42EP1Q00587 391 aa11.88□□□□□ -0.51
PTCH1-225ENST00000551845 RESTQ13127 1097 aa11.88□□□□□ -0.51
PTCH1-225ENST00000551845 SF3A1Q15459 793 aaKnown RBP11.88□□□□□ -0.51
PTCH1-225ENST00000551845 TARBP2Q15633 366 aaKnown RBP11.88□□□□□ -0.51
PTCH1-225ENST00000551845 MTERF2Q49AM1 385 aa11.88□□□□□ -0.51
PTCH1-225ENST00000551845 FAM26DQ5JW98 314 aa11.88□□□□□ -0.51
PTCH1-225ENST00000551845 TMEM240Q5SV17 173 aa11.88□□□□□ -0.51
PTCH1-225ENST00000551845 ANO5Q75V66 913 aa11.88□□□□□ -0.51
PTCH1-225ENST00000551845 CATSPER3Q86XQ3 398 aa11.88□□□□□ -0.51
PTCH1-225ENST00000551845 KIAA0319LQ8IZA0 1049 aa11.88□□□□□ -0.51
PTCH1-225ENST00000551845 ZNF710Q8N1W2 664 aa11.88□□□□□ -0.51
PTCH1-225ENST00000551845 ZBTB10Q96DT7 871 aa11.88□□□□□ -0.51
PTCH1-225ENST00000551845 CEP170P1Q96L14 293 aa11.88□□□□□ -0.51
PTCH1-225ENST00000551845 NACC1Q96RE7 527 aa11.88□□□□□ -0.51
PTCH1-225ENST00000551845 JPH2Q9BR39 696 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms