RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 SELPP16109 830 aa19.47■□□□□ 0.71
CDK4-208ENST00000551706 ZNF174Q15697 407 aa19.47■□□□□ 0.71
CDK4-208ENST00000551706 ZNF484Q5JVG2 852 aa19.47■□□□□ 0.71
CDK4-208ENST00000551706 BRAPQ7Z569 592 aa19.47■□□□□ 0.71
CDK4-208ENST00000551706 RPUSD2Q8IZ73 545 aaKnown RBP19.47■□□□□ 0.71
CDK4-208ENST00000551706 HERVK_113Q902F9 699 aa19.47■□□□□ 0.71
CDK4-208ENST00000551706 DHX38Q92620 1227 aaKnown RBP19.47■□□□□ 0.71
CDK4-208ENST00000551706 MTIF3Q9H2K0 278 aaKnown RBP19.47■□□□□ 0.71
CDK4-208ENST00000551706 TTC12Q9H892 705 aaPredicted RBP19.47■□□□□ 0.71
CDK4-208ENST00000551706 NRBP2Q9NSY0 501 aa19.47■□□□□ 0.71
CDK4-208ENST00000551706 YBX2Q9Y2T7 364 aaKnown RBP19.47■□□□□ 0.71
CDK4-208ENST00000551706 GBF1Q92538 1859 aa19.46■□□□□ 0.71
CDK4-208ENST00000551706 VPS37CA5D8V6 355 aaPredicted RBP19.46■□□□□ 0.71
CDK4-208ENST00000551706 OATP04181 439 aa19.46■□□□□ 0.71
CDK4-208ENST00000551706 PFKMP08237 780 aa19.46■□□□□ 0.71
CDK4-208ENST00000551706 OR52Z1P0C646 297 aa19.46■□□□□ 0.71
CDK4-208ENST00000551706 PDIA4P13667 645 aaKnown RBP19.46■□□□□ 0.71
CDK4-208ENST00000551706 ATP4AP20648 1035 aa19.46■□□□□ 0.71
CDK4-208ENST00000551706 TXKP42681 527 aa19.46■□□□□ 0.71
CDK4-208ENST00000551706 TOB1P50616 345 aaPredicted RBP19.46■□□□□ 0.71
CDK4-208ENST00000551706 IGBP1P78318 339 aa19.46■□□□□ 0.71
CDK4-208ENST00000551706 SPIRE1Q08AE8 756 aa19.46■□□□□ 0.71
CDK4-208ENST00000551706 EPHA7Q15375 998 aa19.46■□□□□ 0.71
CDK4-208ENST00000551706 SKIV2LQ15477 1246 aaKnown RBP19.46■□□□□ 0.71
CDK4-208ENST00000551706 TRIM71Q2Q1W2 868 aaKnown RBP19.46■□□□□ 0.71
CDK4-208ENST00000551706 LRRC8DQ7L1W4 858 aa19.46■□□□□ 0.71
CDK4-208ENST00000551706 RPAINQ86UA6 219 aa19.46■□□□□ 0.71
CDK4-208ENST00000551706 RSPH3Q86UC2 560 aa19.46■□□□□ 0.71
CDK4-208ENST00000551706 TMEM60Q9H2L4 133 aa19.46■□□□□ 0.71
CDK4-208ENST00000551706 IL23AQ9NPF7 189 aa19.46■□□□□ 0.71
CDK4-208ENST00000551706 EML1O00423 815 aa19.45■□□□□ 0.7
CDK4-208ENST00000551706 LAD1O00515 517 aa19.45■□□□□ 0.7
CDK4-208ENST00000551706 P4HBP07237 508 aaKnown RBP19.45■□□□□ 0.7
CDK4-208ENST00000551706 SYT1P21579 422 aa19.45■□□□□ 0.7
CDK4-208ENST00000551706 THPOP40225 353 aa19.45■□□□□ 0.7
CDK4-208ENST00000551706 QARSP47897 775 aaKnown RBP19.45■□□□□ 0.7
CDK4-208ENST00000551706 PSMC5P62195 406 aa19.45■□□□□ 0.7
CDK4-208ENST00000551706 PRKCEQ02156 737 aa19.45■□□□□ 0.7
CDK4-208ENST00000551706 MARCH8Q5T0T0 291 aa19.45■□□□□ 0.7
CDK4-208ENST00000551706 NCAPH2Q6IBW4 605 aa19.45■□□□□ 0.7
CDK4-208ENST00000551706 ALYREFQ86V81 257 aaKnown RBP19.45■□□□□ 0.7
CDK4-208ENST00000551706 SCLYQ96I15 445 aa19.45■□□□□ 0.7
CDK4-208ENST00000551706 FOXD4L1Q9NU39 408 aa19.45■□□□□ 0.7
CDK4-208ENST00000551706 MUC6Q6W4X9 2439 aa19.44■□□□□ 0.7
CDK4-208ENST00000551706 TRANK1O15050 2925 aa19.44■□□□□ 0.7
CDK4-208ENST00000551706 ZNF862O60290 1169 aa19.44■□□□□ 0.7
CDK4-208ENST00000551706 UGCGQ16739 394 aa19.44■□□□□ 0.7
CDK4-208ENST00000551706 XKR3Q5GH77 459 aa19.44■□□□□ 0.7
CDK4-208ENST00000551706 NEK9Q8TD19 979 aa19.44■□□□□ 0.7
CDK4-208ENST00000551706 WNT8BQ93098 351 aa19.44■□□□□ 0.7
CDK4-208ENST00000551706 PCDHB6Q9Y5E3 794 aa19.44■□□□□ 0.7
CDK4-208ENST00000551706 PCDHA2Q9Y5H9 948 aa19.44■□□□□ 0.7
CDK4-208ENST00000551706 GPR37L1O60883 481 aa19.43■□□□□ 0.7
CDK4-208ENST00000551706 FGBP02675 491 aa19.43■□□□□ 0.7
CDK4-208ENST00000551706 NBR1Q14596 966 aa19.43■□□□□ 0.7
CDK4-208ENST00000551706 TMEM266Q2M3C6 531 aa19.43■□□□□ 0.7
CDK4-208ENST00000551706 ZNF618Q5T7W0 954 aa19.43■□□□□ 0.7
CDK4-208ENST00000551706 PPP2R2DQ66LE6 453 aa19.43■□□□□ 0.7
CDK4-208ENST00000551706 BANK1Q8NDB2 785 aa19.43■□□□□ 0.7
CDK4-208ENST00000551706 SMIM35A0A1B0GVV1 85 aa19.42■□□□□ 0.7
CDK4-208ENST00000551706 RSPH10B2B2RC85 870 aa19.42■□□□□ 0.7
CDK4-208ENST00000551706 ZBTB42B2RXF5 422 aa19.42■□□□□ 0.7
CDK4-208ENST00000551706 MAGEB2O15479 319 aa19.42■□□□□ 0.7
CDK4-208ENST00000551706 STX6O43752 255 aa19.42■□□□□ 0.7
CDK4-208ENST00000551706 RSPH10BP0C881 870 aa19.42■□□□□ 0.7
CDK4-208ENST00000551706 KLRC1P26715 233 aa19.42■□□□□ 0.7
CDK4-208ENST00000551706 PTGDRQ13258 359 aa19.42■□□□□ 0.7
CDK4-208ENST00000551706 MTHFD1LQ6UB35 978 aa19.42■□□□□ 0.7
CDK4-208ENST00000551706 RUFY4Q6ZNE9 571 aa19.42■□□□□ 0.7
CDK4-208ENST00000551706 TRMT1LQ7Z2T5 733 aaKnown RBP19.42■□□□□ 0.7
CDK4-208ENST00000551706 C4orf32Q8N8J7 132 aa19.42■□□□□ 0.7
CDK4-208ENST00000551706 TRAPPC12Q8WVT3 735 aa19.42■□□□□ 0.7
CDK4-208ENST00000551706 NIFKQ9BYG3 293 aaKnown RBP19.42■□□□□ 0.7
CDK4-208ENST00000551706 ZSWIM4Q9H7M6 989 aa19.42■□□□□ 0.7
CDK4-208ENST00000551706 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.42■□□□□ 0.7
CDK4-208ENST00000551706 PRPHP41219 470 aa19.41■□□□□ 0.7
CDK4-208ENST00000551706 TECP42680 631 aa19.41■□□□□ 0.7
CDK4-208ENST00000551706 FXR2P51116 673 aaKnown RBP eCLIP19.41■□□□□ 0.7
CDK4-208ENST00000551706 OTOP2Q7RTS6 562 aa19.41■□□□□ 0.7
CDK4-208ENST00000551706 C4orf19Q8IY42 314 aa19.41■□□□□ 0.7
CDK4-208ENST00000551706 NME8Q8N427 588 aa19.41■□□□□ 0.7
CDK4-208ENST00000551706 DNAJB3Q8WWF6 145 aa19.41■□□□□ 0.7
CDK4-208ENST00000551706 EIF2AK1Q9BQI3 630 aaKnown RBP19.41■□□□□ 0.7
CDK4-208ENST00000551706 LXNQ9BS40 222 aa19.41■□□□□ 0.7
CDK4-208ENST00000551706 RAB34Q9BZG1 259 aa19.41■□□□□ 0.7
CDK4-208ENST00000551706 C11orf16Q9NQ32 467 aa19.41■□□□□ 0.7
CDK4-208ENST00000551706 SEPT9Q9UHD8 586 aaPredicted RBP19.41■□□□□ 0.7
CDK4-208ENST00000551706 C22orf31O95567 290 aa19.4■□□□□ 0.7
CDK4-208ENST00000551706 BMP15O95972 392 aa19.4■□□□□ 0.7
CDK4-208ENST00000551706 ACTN1P12814 892 aa19.4■□□□□ 0.7
CDK4-208ENST00000551706 RABGGTBP53611 331 aa19.4■□□□□ 0.7
CDK4-208ENST00000551706 FAM26DQ5JW98 314 aa19.4■□□□□ 0.7
CDK4-208ENST00000551706 IER5Q5VY09 327 aa19.4■□□□□ 0.7
CDK4-208ENST00000551706 TRAF7Q6Q0C0 670 aa19.4■□□□□ 0.7
CDK4-208ENST00000551706 OTUD6AQ7L8S5 288 aa19.4■□□□□ 0.7
CDK4-208ENST00000551706 DEFB128Q7Z7B8 93 aa19.4■□□□□ 0.7
CDK4-208ENST00000551706 FERMT3Q86UX7 667 aa19.4■□□□□ 0.7
CDK4-208ENST00000551706 ERMNQ8TAM6 284 aa19.4■□□□□ 0.7
CDK4-208ENST00000551706 DYDC2Q96IM9 177 aa19.4■□□□□ 0.7
CDK4-208ENST00000551706 HSD17B14Q9BPX1 270 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms