RNA–Protein interactions for RNA: ENST00000551497.1

SMARCD1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 4

Gene SMARCD1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-211ENST00000551497 FAM49AQ9H0Q0 323 aaPredicted RBP16.98■□□□□ 0.31
SMARCD1-211ENST00000551497 TSHZ2Q9NRE2 1034 aa16.98■□□□□ 0.31
SMARCD1-211ENST00000551497 CEP131Q9UPN4 1083 aa16.98■□□□□ 0.31
SMARCD1-211ENST00000551497 PCDHA2Q9Y5H9 948 aa16.98■□□□□ 0.31
SMARCD1-211ENST00000551497 DKC1O60832 514 aaKnown RBP eCLIP16.97■□□□□ 0.31
SMARCD1-211ENST00000551497 LYPLA2O95372 231 aa16.97■□□□□ 0.31
SMARCD1-211ENST00000551497 C22orf31O95567 290 aa16.97■□□□□ 0.31
SMARCD1-211ENST00000551497 BMP15O95972 392 aa16.97■□□□□ 0.31
SMARCD1-211ENST00000551497 RPA1P27694 616 aa16.97■□□□□ 0.31
SMARCD1-211ENST00000551497 YWHABP31946 246 aaKnown RBP16.97■□□□□ 0.31
SMARCD1-211ENST00000551497 CCT6AP40227 531 aaKnown RBP16.97■□□□□ 0.31
SMARCD1-211ENST00000551497 GPNMBQ14956 572 aa16.97■□□□□ 0.31
SMARCD1-211ENST00000551497 SLC39A14Q15043 492 aa16.97■□□□□ 0.31
SMARCD1-211ENST00000551497 TRAF7Q6Q0C0 670 aa16.97■□□□□ 0.31
SMARCD1-211ENST00000551497 ERMNQ8TAM6 284 aa16.97■□□□□ 0.31
SMARCD1-211ENST00000551497 NEK9Q8TD19 979 aa16.97■□□□□ 0.31
SMARCD1-211ENST00000551497 PIGOQ8TEQ8 1089 aa16.97■□□□□ 0.31
SMARCD1-211ENST00000551497 GDF15Q99988 308 aa16.97■□□□□ 0.31
SMARCD1-211ENST00000551497 OSBPL7Q9BZF2 842 aa16.97■□□□□ 0.31
SMARCD1-211ENST00000551497 TUFT1Q9NNX1 390 aa16.97■□□□□ 0.31
SMARCD1-211ENST00000551497 COL1A2P08123 1366 aa16.97■□□□□ 0.31
SMARCD1-211ENST00000551497 PITPNM1O00562 1244 aa16.96■□□□□ 0.31
SMARCD1-211ENST00000551497 ACRP10323 421 aa16.96■□□□□ 0.31
SMARCD1-211ENST00000551497 SELPP16109 830 aa16.96■□□□□ 0.31
SMARCD1-211ENST00000551497 NASPP49321 788 aaPredicted RBP16.96■□□□□ 0.31
SMARCD1-211ENST00000551497 DNM1Q05193 864 aaKnown RBP16.96■□□□□ 0.31
SMARCD1-211ENST00000551497 RBL2Q08999 1139 aa16.96■□□□□ 0.31
SMARCD1-211ENST00000551497 TMEM62Q0P6H9 643 aa16.96■□□□□ 0.31
SMARCD1-211ENST00000551497 XKR9Q5GH70 373 aa16.96■□□□□ 0.31
SMARCD1-211ENST00000551497 TAF2Q6P1X5 1199 aa16.96■□□□□ 0.31
SMARCD1-211ENST00000551497 POTEGQ6S5H5 508 aa16.96■□□□□ 0.31
SMARCD1-211ENST00000551497 C16orf59Q7L2K0 433 aa16.96■□□□□ 0.31
SMARCD1-211ENST00000551497 KIAA0319LQ8IZA0 1049 aa16.96■□□□□ 0.31
SMARCD1-211ENST00000551497 TMEM199Q8N511 208 aa16.96■□□□□ 0.31
SMARCD1-211ENST00000551497 METTL13Q8N6R0 699 aa16.96■□□□□ 0.31
SMARCD1-211ENST00000551497 CAGE1Q8TC20 777 aa16.96■□□□□ 0.31
SMARCD1-211ENST00000551497 VWCEQ96DN2 955 aa16.96■□□□□ 0.31
SMARCD1-211ENST00000551497 CEP170P1Q96L14 293 aa16.96■□□□□ 0.31
SMARCD1-211ENST00000551497 CLIC6Q96NY7 704 aa16.96■□□□□ 0.31
SMARCD1-211ENST00000551497 RAB34Q9BZG1 259 aa16.96■□□□□ 0.31
SMARCD1-211ENST00000551497 SUGCTQ9HAC7 445 aa16.96■□□□□ 0.31
SMARCD1-211ENST00000551497 CYP26B1Q9NR63 512 aa16.96■□□□□ 0.31
SMARCD1-211ENST00000551497 FBXO2Q9UK22 296 aaPredicted RBP16.96■□□□□ 0.31
SMARCD1-211ENST00000551497 RBM19Q9Y4C8 960 aaKnown RBP16.96■□□□□ 0.31
SMARCD1-211ENST00000551497 SMIM35A0A1B0GVV1 85 aa16.95■□□□□ 0.3
SMARCD1-211ENST00000551497 CHRNA1P02708 482 aa16.95■□□□□ 0.3
SMARCD1-211ENST00000551497 CTSHP09668 335 aa16.95■□□□□ 0.3
SMARCD1-211ENST00000551497 FPGSQ05932 587 aa16.95■□□□□ 0.3
SMARCD1-211ENST00000551497 TBC1D8BQ0IIM8 1120 aa16.95■□□□□ 0.3
SMARCD1-211ENST00000551497 SPECC1Q5M775 1068 aa16.95■□□□□ 0.3
SMARCD1-211ENST00000551497 EFCAB12Q6NXP0 572 aa16.95■□□□□ 0.3
SMARCD1-211ENST00000551497 LRRC8DQ7L1W4 858 aa16.95■□□□□ 0.3
SMARCD1-211ENST00000551497 OTUD6AQ7L8S5 288 aa16.95■□□□□ 0.3
SMARCD1-211ENST00000551497 LRRC71Q8N4P6 559 aa16.95■□□□□ 0.3
SMARCD1-211ENST00000551497 CCDC155Q8N6L0 562 aa16.95■□□□□ 0.3
SMARCD1-211ENST00000551497 LINC00301Q8NCQ3 95 aa16.95■□□□□ 0.3
SMARCD1-211ENST00000551497 SNX29Q8TEQ0 813 aa16.95■□□□□ 0.3
SMARCD1-211ENST00000551497 PLIN2Q99541 437 aa16.95■□□□□ 0.3
SMARCD1-211ENST00000551497 KIAA1024Q9UPX6 916 aa16.95■□□□□ 0.3
SMARCD1-211ENST00000551497 LTBP2Q14767 1821 aa16.95■□□□□ 0.3
SMARCD1-211ENST00000551497 SCN5AQ14524 2016 aa16.94■□□□□ 0.3
SMARCD1-211ENST00000551497 RSPH10B2B2RC85 870 aa16.94■□□□□ 0.3
SMARCD1-211ENST00000551497 MAGEB2O15479 319 aa16.94■□□□□ 0.3
SMARCD1-211ENST00000551497 RSPH10BP0C881 870 aa16.94■□□□□ 0.3
SMARCD1-211ENST00000551497 XRCC6P12956 609 aaKnown RBP eCLIP16.94■□□□□ 0.3
SMARCD1-211ENST00000551497 CLCN3P51790 818 aa16.94■□□□□ 0.3
SMARCD1-211ENST00000551497 MKRN4PQ13434 485 aaPredicted RBP16.94■□□□□ 0.3
SMARCD1-211ENST00000551497 DRP2Q13474 957 aa16.94■□□□□ 0.3
SMARCD1-211ENST00000551497 MBTPS1Q14703 1052 aa16.94■□□□□ 0.3
SMARCD1-211ENST00000551497 STK38Q15208 465 aa16.94■□□□□ 0.3
SMARCD1-211ENST00000551497 ZRSR1Q15695 479 aaKnown RBP16.94■□□□□ 0.3
SMARCD1-211ENST00000551497 KRT79Q5XKE5 535 aa16.94■□□□□ 0.3
SMARCD1-211ENST00000551497 CHRDL2Q6WN34 429 aa16.94■□□□□ 0.3
SMARCD1-211ENST00000551497 USP49Q70CQ1 688 aa16.94■□□□□ 0.3
SMARCD1-211ENST00000551497 DEFB128Q7Z7B8 93 aa16.94■□□□□ 0.3
SMARCD1-211ENST00000551497 RPAINQ86UA6 219 aa16.94■□□□□ 0.3
SMARCD1-211ENST00000551497 PNMA5Q96PV4 448 aa16.94■□□□□ 0.3
SMARCD1-211ENST00000551497 NACC1Q96RE7 527 aa16.94■□□□□ 0.3
SMARCD1-211ENST00000551497 UBE2OQ9C0C9 1292 aaKnown RBP16.94■□□□□ 0.3
SMARCD1-211ENST00000551497 CSRNP2Q9H175 543 aa16.94■□□□□ 0.3
SMARCD1-211ENST00000551497 CDHR5Q9HBB8 845 aa16.94■□□□□ 0.3
SMARCD1-211ENST00000551497 BMP2KQ9NSY1 1161 aaPredicted RBP16.94■□□□□ 0.3
SMARCD1-211ENST00000551497 ANKEF1Q9NU02 776 aa16.94■□□□□ 0.3
SMARCD1-211ENST00000551497 DDX19AQ9NUU7 478 aaKnown RBP16.94■□□□□ 0.3
SMARCD1-211ENST00000551497 COLQQ9Y215 455 aaPredicted RBP16.94■□□□□ 0.3
SMARCD1-211ENST00000551497 SRPRBQ9Y5M8 271 aaKnown RBP16.94■□□□□ 0.3
SMARCD1-211ENST00000551497 SPTLC2O15270 562 aa16.93■□□□□ 0.3
SMARCD1-211ENST00000551497 NBNO60934 754 aa16.93■□□□□ 0.3
SMARCD1-211ENST00000551497 MAFO75444 373 aaPredicted RBP16.93■□□□□ 0.3
SMARCD1-211ENST00000551497 HABP4Q5JVS0 413 aaKnown RBP16.93■□□□□ 0.3
SMARCD1-211ENST00000551497 FAM26DQ5JW98 314 aa16.93■□□□□ 0.3
SMARCD1-211ENST00000551497 HAUS3Q68CZ6 603 aa16.93■□□□□ 0.3
SMARCD1-211ENST00000551497 LINC01465Q8N7H1 131 aa16.93■□□□□ 0.3
SMARCD1-211ENST00000551497 EPSTI1Q96J88 318 aa16.93■□□□□ 0.3
SMARCD1-211ENST00000551497 PPP1R16BQ96T49 567 aa16.93■□□□□ 0.3
SMARCD1-211ENST00000551497 MYH15Q9Y2K3 1946 aa16.93■□□□□ 0.3
SMARCD1-211ENST00000551497 IGKV6-21A0A0C4DH24 114 aa16.92■□□□□ 0.3
SMARCD1-211ENST00000551497 E9PMD0 336 aa16.92■□□□□ 0.3
SMARCD1-211ENST00000551497 VTNP04004 478 aa16.92■□□□□ 0.3
SMARCD1-211ENST00000551497 LONP1P36776 959 aaKnown RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms