RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 ANO5Q75V66 913 aa11.56□□□□□ -0.56
NEK3-203ENST00000551355 SLC17A8Q8NDX2 589 aa11.56□□□□□ -0.56
NEK3-203ENST00000551355 MCPH1Q8NEM0 835 aa11.56□□□□□ -0.56
NEK3-203ENST00000551355 ATP8B4Q8TF62 1192 aa11.56□□□□□ -0.56
NEK3-203ENST00000551355 STAMQ92783 540 aa11.56□□□□□ -0.56
NEK3-203ENST00000551355 CEP170P1Q96L14 293 aa11.56□□□□□ -0.56
NEK3-203ENST00000551355 PCYT2Q99447 389 aa11.56□□□□□ -0.56
NEK3-203ENST00000551355 FUCA2Q9BTY2 467 aa11.56□□□□□ -0.56
NEK3-203ENST00000551355 KATNAL1Q9BW62 490 aa11.56□□□□□ -0.56
NEK3-203ENST00000551355 BLZF1Q9H2G9 400 aa11.56□□□□□ -0.56
NEK3-203ENST00000551355 CYP26B1Q9NR63 512 aa11.56□□□□□ -0.56
NEK3-203ENST00000551355 SEL1LQ9UBV2 794 aa11.56□□□□□ -0.56
NEK3-203ENST00000551355 PLXNA1Q9UIW2 1896 aa11.56□□□□□ -0.56
NEK3-203ENST00000551355 MAN1B1Q9UKM7 699 aa11.56□□□□□ -0.56
NEK3-203ENST00000551355 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.55□□□□□ -0.56
NEK3-203ENST00000551355 FRMD3A2A2Y4 597 aa11.55□□□□□ -0.56
NEK3-203ENST00000551355 STBD1O95210 358 aa11.55□□□□□ -0.56
NEK3-203ENST00000551355 KIF20AO95235 890 aa11.55□□□□□ -0.56
NEK3-203ENST00000551355 LGALS2P05162 132 aa11.55□□□□□ -0.56
NEK3-203ENST00000551355 ELNP15502 786 aa11.55□□□□□ -0.56
NEK3-203ENST00000551355 SCP2P22307 547 aa11.55□□□□□ -0.56
NEK3-203ENST00000551355 ABCD1P33897 745 aa11.55□□□□□ -0.56
NEK3-203ENST00000551355 GJA9P57773 515 aa11.55□□□□□ -0.56
NEK3-203ENST00000551355 CAP1Q01518 475 aa11.55□□□□□ -0.56
NEK3-203ENST00000551355 STIM1Q13586 685 aa11.55□□□□□ -0.56
NEK3-203ENST00000551355 GIT2Q14161 759 aa11.55□□□□□ -0.56
NEK3-203ENST00000551355 FSCN1Q16658 493 aaKnown RBP11.55□□□□□ -0.56
NEK3-203ENST00000551355 ARSHQ5FYA8 562 aa11.55□□□□□ -0.56
NEK3-203ENST00000551355 ZNF484Q5JVG2 852 aa11.55□□□□□ -0.56
NEK3-203ENST00000551355 UTP14CQ5TAP6 766 aaKnown RBP11.55□□□□□ -0.56
NEK3-203ENST00000551355 ZNF658Q5TYW1 1059 aaPredicted RBP11.55□□□□□ -0.56
NEK3-203ENST00000551355 TRPV1Q8NER1 839 aa11.55□□□□□ -0.56
NEK3-203ENST00000551355 SLC7A3Q8WY07 619 aa11.55□□□□□ -0.56
NEK3-203ENST00000551355 DNAJC19Q96DA6 116 aa11.55□□□□□ -0.56
NEK3-203ENST00000551355 DRC1Q96MC2 740 aa11.55□□□□□ -0.56
NEK3-203ENST00000551355 UPF3AQ9H1J1 476 aaKnown RBP11.55□□□□□ -0.56
NEK3-203ENST00000551355 C17orf75Q9HAS0 396 aa11.55□□□□□ -0.56
NEK3-203ENST00000551355 HMX1Q9NP08 348 aaPredicted RBP11.55□□□□□ -0.56
NEK3-203ENST00000551355 PANK4Q9NVE7 773 aa11.55□□□□□ -0.56
NEK3-203ENST00000551355 SEPT9Q9UHD8 586 aaPredicted RBP11.55□□□□□ -0.56
NEK3-203ENST00000551355 COL1A2P08123 1366 aa11.54□□□□□ -0.56
NEK3-203ENST00000551355 CASP8AP2Q9UKL3 1982 aa11.54□□□□□ -0.56
NEK3-203ENST00000551355 H3BRB1 525 aa11.54□□□□□ -0.56
NEK3-203ENST00000551355 KLRC4O43908 158 aa11.54□□□□□ -0.56
NEK3-203ENST00000551355 FAM13AO94988 1023 aa11.54□□□□□ -0.56
NEK3-203ENST00000551355 IDEP14735 1019 aa11.54□□□□□ -0.56
NEK3-203ENST00000551355 ATP4AP20648 1035 aa11.54□□□□□ -0.56
NEK3-203ENST00000551355 RTP1P59025 263 aa11.54□□□□□ -0.56
NEK3-203ENST00000551355 PKN2Q16513 984 aaKnown RBP11.54□□□□□ -0.56
NEK3-203ENST00000551355 KMT5BQ4FZB7 885 aa11.54□□□□□ -0.56
NEK3-203ENST00000551355 COBLL1Q53SF7 1204 aa11.54□□□□□ -0.56
NEK3-203ENST00000551355 TMEM63BQ5T3F8 832 aa11.54□□□□□ -0.56
NEK3-203ENST00000551355 GJC2Q5T442 439 aaPredicted RBP11.54□□□□□ -0.56
NEK3-203ENST00000551355 STXBP4Q6ZWJ1 553 aa11.54□□□□□ -0.56
NEK3-203ENST00000551355 DYMQ7RTS9 669 aa11.54□□□□□ -0.56
NEK3-203ENST00000551355 PCSK9Q8NBP7 692 aaKnown RBP11.54□□□□□ -0.56
NEK3-203ENST00000551355 KIFAP3Q92845 792 aa11.54□□□□□ -0.56
NEK3-203ENST00000551355 ERCC4Q92889 916 aaPredicted RBP11.54□□□□□ -0.56
NEK3-203ENST00000551355 BPIFA3Q9BQP9 254 aa11.54□□□□□ -0.56
NEK3-203ENST00000551355 REEP2Q9BRK0 252 aa11.54□□□□□ -0.56
NEK3-203ENST00000551355 C16orf70Q9BSU1 422 aa11.54□□□□□ -0.56
NEK3-203ENST00000551355 TUT1Q9H6E5 874 aaKnown RBP11.54□□□□□ -0.56
NEK3-203ENST00000551355 ATP6V0A4Q9HBG4 840 aa11.54□□□□□ -0.56
NEK3-203ENST00000551355 PARVGQ9HBI0 331 aa11.54□□□□□ -0.56
NEK3-203ENST00000551355 LARSQ9P2J5 1176 aaKnown RBP11.54□□□□□ -0.56
NEK3-203ENST00000551355 DDX20Q9UHI6 824 aaKnown RBP11.54□□□□□ -0.56
NEK3-203ENST00000551355 PTPN22Q9Y2R2 807 aa11.54□□□□□ -0.56
NEK3-203ENST00000551355 KIAA1217Q5T5P2 1943 aa11.54□□□□□ -0.56
NEK3-203ENST00000551355 MGAMO43451 1857 aa11.53□□□□□ -0.56
NEK3-203ENST00000551355 RRN3P2A6NIE6 340 aa11.53□□□□□ -0.56
NEK3-203ENST00000551355 BIN1O00499 593 aa11.53□□□□□ -0.56
NEK3-203ENST00000551355 ZBTB39O15060 712 aa11.53□□□□□ -0.56
NEK3-203ENST00000551355 MAGEB2O15479 319 aa11.53□□□□□ -0.56
NEK3-203ENST00000551355 ADCY6O43306 1168 aa11.53□□□□□ -0.56
NEK3-203ENST00000551355 F2P00734 622 aa11.53□□□□□ -0.56
NEK3-203ENST00000551355 INHAP05111 366 aa11.53□□□□□ -0.56
NEK3-203ENST00000551355 MAPTP10636 758 aaKnown RBP11.53□□□□□ -0.56
NEK3-203ENST00000551355 CST5P28325 142 aaPredicted RBP11.53□□□□□ -0.56
NEK3-203ENST00000551355 ERCC5P28715 1186 aaPredicted RBP11.53□□□□□ -0.56
NEK3-203ENST00000551355 CTCFP49711 727 aaPredicted RBP11.53□□□□□ -0.56
NEK3-203ENST00000551355 ZNF131P52739 623 aa11.53□□□□□ -0.56
NEK3-203ENST00000551355 POLGP54098 1239 aaPredicted RBP11.53□□□□□ -0.56
NEK3-203ENST00000551355 EHHADHQ08426 723 aa11.53□□□□□ -0.56
NEK3-203ENST00000551355 GSE1Q14687 1217 aa11.53□□□□□ -0.56
NEK3-203ENST00000551355 PLCB4Q15147 1175 aa11.53□□□□□ -0.56
NEK3-203ENST00000551355 TARBP2Q15633 366 aaKnown RBP11.53□□□□□ -0.56
NEK3-203ENST00000551355 HERC4Q5GLZ8 1057 aaPredicted RBP11.53□□□□□ -0.56
NEK3-203ENST00000551355 RUSC1Q9BVN2 902 aa11.53□□□□□ -0.56
NEK3-203ENST00000551355 DHX33Q9H6R0 707 aaKnown RBP11.53□□□□□ -0.56
NEK3-203ENST00000551355 XPNPEP3Q9NQH7 507 aa11.53□□□□□ -0.56
NEK3-203ENST00000551355 OLFML3Q9NRN5 406 aa11.53□□□□□ -0.56
NEK3-203ENST00000551355 TSKSQ9UJT2 592 aa11.53□□□□□ -0.56
NEK3-203ENST00000551355 TRPC6Q9Y210 931 aa11.53□□□□□ -0.56
NEK3-203ENST00000551355 TELO2Q9Y4R8 837 aa11.53□□□□□ -0.56
NEK3-203ENST00000551355 PTCH2Q9Y6C5 1203 aa11.53□□□□□ -0.56
NEK3-203ENST00000551355 A0A087WWV3 80 aa11.52□□□□□ -0.57
NEK3-203ENST00000551355 H0YCG3 227 aa11.52□□□□□ -0.57
NEK3-203ENST00000551355 USO1O60763 962 aaKnown RBP11.52□□□□□ -0.57
NEK3-203ENST00000551355 MAFO75444 373 aaPredicted RBP11.52□□□□□ -0.57
NEK3-203ENST00000551355 CABYRO75952 493 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms