RNA–Protein interactions for RNA: ENST00000550657.1

UBE2N-205, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2 BASIC

Gene UBE2N, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-205ENST00000550657 TRIM49P0CI25 452 aa10.06□□□□□ -0.8
UBE2N-205ENST00000550657 TRIM49CP0CI26 452 aa10.06□□□□□ -0.8
UBE2N-205ENST00000550657 ABCB4P21439 1286 aa10.06□□□□□ -0.8
UBE2N-205ENST00000550657 RPL13P26373 211 aaKnown RBP10.06□□□□□ -0.8
UBE2N-205ENST00000550657 STAT2P52630 851 aa10.06□□□□□ -0.8
UBE2N-205ENST00000550657 EPHB4P54760 987 aa10.06□□□□□ -0.8
UBE2N-205ENST00000550657 MARSP56192 900 aaKnown RBP10.06□□□□□ -0.8
UBE2N-205ENST00000550657 MEI1Q5TIA1 1274 aa10.06□□□□□ -0.8
UBE2N-205ENST00000550657 RINT1Q6NUQ1 792 aa10.06□□□□□ -0.8
UBE2N-205ENST00000550657 GBP6Q6ZN66 633 aa10.06□□□□□ -0.8
UBE2N-205ENST00000550657 FRMD5Q7Z6J6 570 aa10.06□□□□□ -0.8
UBE2N-205ENST00000550657 CRYGNQ8WXF5 182 aa10.06□□□□□ -0.8
UBE2N-205ENST00000550657 ARL8AQ96BM9 186 aa10.06□□□□□ -0.8
UBE2N-205ENST00000550657 MBOAT7Q96N66 472 aa10.06□□□□□ -0.8
UBE2N-205ENST00000550657 CENPHQ9H3R5 247 aa10.06□□□□□ -0.8
UBE2N-205ENST00000550657 TSKSQ9UJT2 592 aa10.06□□□□□ -0.8
UBE2N-205ENST00000550657 ZBTB21Q9ULJ3 1066 aa10.06□□□□□ -0.8
UBE2N-205ENST00000550657 TRAF3IP3Q9Y228 551 aa10.06□□□□□ -0.8
UBE2N-205ENST00000550657 GAS7O60861 476 aa10.06□□□□□ -0.8
UBE2N-205ENST00000550657 ATP1A2P50993 1020 aa10.06□□□□□ -0.8
UBE2N-205ENST00000550657 IFT20Q8IY31 132 aa10.06□□□□□ -0.8
UBE2N-205ENST00000550657 FAM186BQ8IYM0 893 aa10.06□□□□□ -0.8
UBE2N-205ENST00000550657 GMCL1Q96IK5 515 aa10.06□□□□□ -0.8
UBE2N-205ENST00000550657 TYW1Q9NV66 732 aaKnown RBP10.06□□□□□ -0.8
UBE2N-205ENST00000550657 NAGPAQ9UK23 515 aa10.06□□□□□ -0.8
UBE2N-205ENST00000550657 PDXKO00764 312 aa10.05□□□□□ -0.8
UBE2N-205ENST00000550657 PPIP5K2O43314 1243 aa10.05□□□□□ -0.8
UBE2N-205ENST00000550657 RAD17O75943 681 aa10.05□□□□□ -0.8
UBE2N-205ENST00000550657 EYA4O95677 639 aa10.05□□□□□ -0.8
UBE2N-205ENST00000550657 IVLP07476 585 aa10.05□□□□□ -0.8
UBE2N-205ENST00000550657 ARHGAP44Q17R89 818 aa10.05□□□□□ -0.8
UBE2N-205ENST00000550657 CDAN1Q8IWY9 1227 aa10.05□□□□□ -0.8
UBE2N-205ENST00000550657 BANK1Q8NDB2 785 aa10.05□□□□□ -0.8
UBE2N-205ENST00000550657 GMCL1P1Q8NEA9 526 aa10.05□□□□□ -0.8
UBE2N-205ENST00000550657 SLC35C1Q96A29 364 aa10.05□□□□□ -0.8
UBE2N-205ENST00000550657 FBXO28Q9NVF7 368 aa10.05□□□□□ -0.8
UBE2N-205ENST00000550657 RRP15Q9Y3B9 282 aaKnown RBP10.05□□□□□ -0.8
UBE2N-205ENST00000550657 TBX3O15119 743 aa10.05□□□□□ -0.8
UBE2N-205ENST00000550657 RAD51CO43502 376 aa10.05□□□□□ -0.8
UBE2N-205ENST00000550657 SLITRK3O94933 977 aa10.05□□□□□ -0.8
UBE2N-205ENST00000550657 EPHA7Q15375 998 aa10.05□□□□□ -0.8
UBE2N-205ENST00000550657 NAA35Q5VZE5 725 aa10.05□□□□□ -0.8
UBE2N-205ENST00000550657 MOXD1Q6UVY6 613 aa10.05□□□□□ -0.8
UBE2N-205ENST00000550657 EPM2AIP1Q7L775 607 aaPredicted RBP10.05□□□□□ -0.8
UBE2N-205ENST00000550657 ADAT2Q7Z6V5 191 aaKnown RBP10.05□□□□□ -0.8
UBE2N-205ENST00000550657 CASKIN2Q8WXE0 1202 aa10.05□□□□□ -0.8
UBE2N-205ENST00000550657 ZIM3Q96PE6 472 aa10.05□□□□□ -0.8
UBE2N-205ENST00000550657 PCDHGC5Q9Y5F6 944 aa10.05□□□□□ -0.8
UBE2N-205ENST00000550657 GCOM1H8Y6P7 765 aaPredicted RBP10.04□□□□□ -0.8
UBE2N-205ENST00000550657 MYO1CO00159 1063 aa10.04□□□□□ -0.8
UBE2N-205ENST00000550657 TGFB1I1O43294 461 aa10.04□□□□□ -0.8
UBE2N-205ENST00000550657 C21orf2O43822 256 aa10.04□□□□□ -0.8
UBE2N-205ENST00000550657 LRRN2O75325 713 aa10.04□□□□□ -0.8
UBE2N-205ENST00000550657 POLR2MP0CAP2 368 aa10.04□□□□□ -0.8
UBE2N-205ENST00000550657 ARP10275 920 aa10.04□□□□□ -0.8
UBE2N-205ENST00000550657 PRPF4BQ13523 1007 aaKnown RBP10.04□□□□□ -0.8
UBE2N-205ENST00000550657 ODR4Q5SWX8 454 aa10.04□□□□□ -0.8
UBE2N-205ENST00000550657 FOXR2Q6PJQ5 311 aa10.04□□□□□ -0.8
UBE2N-205ENST00000550657 OTOP1Q7RTM1 612 aa10.04□□□□□ -0.8
UBE2N-205ENST00000550657 ZNF572Q7Z3I7 529 aaPredicted RBP10.04□□□□□ -0.8
UBE2N-205ENST00000550657 DAAM2Q86T65 1068 aa10.04□□□□□ -0.8
UBE2N-205ENST00000550657 DDX42Q86XP3 938 aaKnown RBP eCLIP10.04□□□□□ -0.8
UBE2N-205ENST00000550657 GLYCTKQ8IVS8 523 aa10.04□□□□□ -0.8
UBE2N-205ENST00000550657 FAM178BQ8IXR5 827 aa10.04□□□□□ -0.8
UBE2N-205ENST00000550657 SYCP3Q8IZU3 236 aa10.04□□□□□ -0.8
UBE2N-205ENST00000550657 WRAP73Q9P2S5 460 aaPredicted RBP10.04□□□□□ -0.8
UBE2N-205ENST00000550657 SERPINA10Q9UK55 444 aa10.04□□□□□ -0.8
UBE2N-205ENST00000550657 ZBTB12Q9Y330 459 aaPredicted RBP10.04□□□□□ -0.8
UBE2N-205ENST00000550657 FLOT1O75955 427 aa10.04□□□□□ -0.8
UBE2N-205ENST00000550657 HOXA7P31268 230 aaPredicted RBP10.04□□□□□ -0.8
UBE2N-205ENST00000550657 GNGT1P63211 74 aa10.04□□□□□ -0.8
UBE2N-205ENST00000550657 CFAP58Q5T655 872 aa10.04□□□□□ -0.8
UBE2N-205ENST00000550657 CC2D2BQ6DHV5 1058 aa10.04□□□□□ -0.8
UBE2N-205ENST00000550657 EMBQ6PCB8 327 aa10.04□□□□□ -0.8
UBE2N-205ENST00000550657 PEX26Q7Z412 305 aa10.04□□□□□ -0.8
UBE2N-205ENST00000550657 MAATS1Q7Z4T9 603 aa10.04□□□□□ -0.8
UBE2N-205ENST00000550657 VPS36Q86VN1 386 aa10.04□□□□□ -0.8
UBE2N-205ENST00000550657 ZNF577Q9BSK1 485 aa10.04□□□□□ -0.8
UBE2N-205ENST00000550657 PCIF1Q9H4Z3 704 aa10.04□□□□□ -0.8
UBE2N-205ENST00000550657 PARVGQ9HBI0 331 aa10.04□□□□□ -0.8
UBE2N-205ENST00000550657 ARHGEF10LQ9HCE6 1279 aa10.04□□□□□ -0.8
UBE2N-205ENST00000550657 TMOD2Q9NZR1 351 aa10.04□□□□□ -0.8
UBE2N-205ENST00000550657 MYH7BA7E2Y1 1941 aa10.04□□□□□ -0.8
UBE2N-205ENST00000550657 IGLV3-22A0A075B6J6 115 aa10.04□□□□□ -0.8
UBE2N-205ENST00000550657 KIF4AO95239 1232 aa10.04□□□□□ -0.8
UBE2N-205ENST00000550657 ITIH3Q06033 890 aa10.04□□□□□ -0.8
UBE2N-205ENST00000550657 PAK2Q13177 524 aa10.04□□□□□ -0.8
UBE2N-205ENST00000550657 TTMPQ5BVD1 217 aa10.04□□□□□ -0.8
UBE2N-205ENST00000550657 SRLQ86TD4 932 aa10.04□□□□□ -0.8
UBE2N-205ENST00000550657 ZC3H3Q8IXZ2 948 aaKnown RBP10.04□□□□□ -0.8
UBE2N-205ENST00000550657 INPP4AQ96PE3 977 aaPredicted RBP10.04□□□□□ -0.8
UBE2N-205ENST00000550657 GLIS2Q9BZE0 524 aaPredicted RBP10.04□□□□□ -0.8
UBE2N-205ENST00000550657 DDX47Q9H0S4 455 aaKnown RBP10.04□□□□□ -0.8
UBE2N-205ENST00000550657 METTL14Q9HCE5 456 aaKnown RBP10.04□□□□□ -0.8
UBE2N-205ENST00000550657 SIX2Q9NPC8 291 aa10.04□□□□□ -0.8
UBE2N-205ENST00000550657 OSGEPQ9NPF4 335 aa10.04□□□□□ -0.8
UBE2N-205ENST00000550657 SAMM50Q9Y512 469 aa10.04□□□□□ -0.8
UBE2N-205ENST00000550657 TISP43B9A030 160 aa10.03□□□□□ -0.8
UBE2N-205ENST00000550657 DDX3XO00571 662 aaKnown RBP eCLIP10.03□□□□□ -0.82e-15■■■■■ 30.2
UBE2N-205ENST00000550657 PPP1R12BO60237 982 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms