RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 POLR3FQ9H1D9 316 aaPredicted RBP13.22□□□□□ -0.29
NR4A1-215ENST00000550557 FBXO28Q9NVF7 368 aa13.22□□□□□ -0.29
NR4A1-215ENST00000550557 KIF1AQ12756 1690 aa13.21□□□□□ -0.29
NR4A1-215ENST00000550557 MED7O43513 233 aa13.21□□□□□ -0.29
NR4A1-215ENST00000550557 ARID5BQ14865 1188 aa13.21□□□□□ -0.29
NR4A1-215ENST00000550557 BSPRYQ5W0U4 402 aa13.21□□□□□ -0.29
NR4A1-215ENST00000550557 C4orf50Q6ZRC1 276 aa13.21□□□□□ -0.29
NR4A1-215ENST00000550557 PEX26Q7Z412 305 aa13.21□□□□□ -0.29
NR4A1-215ENST00000550557 MICALL1Q8N3F8 863 aa13.21□□□□□ -0.29
NR4A1-215ENST00000550557 PCSK9Q8NBP7 692 aaKnown RBP13.21□□□□□ -0.29
NR4A1-215ENST00000550557 POTEB3A0JP26 581 aa13.21□□□□□ -0.29
NR4A1-215ENST00000550557 GOLGA6CA6NDK9 693 aa13.21□□□□□ -0.29
NR4A1-215ENST00000550557 GOLGA6BA6NDN3 693 aa13.21□□□□□ -0.29
NR4A1-215ENST00000550557 GOLGA6DP0CG33 693 aa13.21□□□□□ -0.29
NR4A1-215ENST00000550557 PSMD2Q13200 908 aa13.21□□□□□ -0.29
NR4A1-215ENST00000550557 LAMC2Q13753 1193 aa13.21□□□□□ -0.29
NR4A1-215ENST00000550557 CASC4Q6P4E1 433 aa13.21□□□□□ -0.29
NR4A1-215ENST00000550557 POTEBQ6S5H4 581 aa13.21□□□□□ -0.29
NR4A1-215ENST00000550557 PGBD4Q96DM1 585 aa13.21□□□□□ -0.29
NR4A1-215ENST00000550557 CCDC51Q96ER9 411 aa13.21□□□□□ -0.29
NR4A1-215ENST00000550557 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.21□□□□□ -0.29
NR4A1-215ENST00000550557 GOLGA6AQ9NYA3 693 aa13.21□□□□□ -0.29
NR4A1-215ENST00000550557 MAGEB2O15479 319 aa13.21□□□□□ -0.3
NR4A1-215ENST00000550557 CYP2C9P11712 490 aa13.21□□□□□ -0.3
NR4A1-215ENST00000550557 XKR3Q5GH77 459 aa13.21□□□□□ -0.3
NR4A1-215ENST00000550557 RNF149Q8NC42 400 aa13.21□□□□□ -0.3
NR4A1-215ENST00000550557 P2RX5Q93086 422 aa13.21□□□□□ -0.3
NR4A1-215ENST00000550557 MRPL4Q9BYD3 311 aaKnown RBP13.21□□□□□ -0.3
NR4A1-215ENST00000550557 RASSF4Q9H2L5 321 aa13.21□□□□□ -0.3
NR4A1-215ENST00000550557 RAB20Q9NX57 234 aa13.21□□□□□ -0.3
NR4A1-215ENST00000550557 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.21□□□□□ -0.3
NR4A1-215ENST00000550557 ODF2LQ9ULJ1 636 aa13.21□□□□□ -0.3
NR4A1-215ENST00000550557 SLC16A4O15374 487 aa13.2□□□□□ -0.3
NR4A1-215ENST00000550557 RPS6KA5O75582 802 aa13.2□□□□□ -0.3
NR4A1-215ENST00000550557 AFPP02771 609 aaKnown RBP13.2□□□□□ -0.3
NR4A1-215ENST00000550557 CPB1P15086 417 aa13.2□□□□□ -0.3
NR4A1-215ENST00000550557 BRD3Q15059 726 aa13.2□□□□□ -0.3
NR4A1-215ENST00000550557 EPHA7Q15375 998 aa13.2□□□□□ -0.3
NR4A1-215ENST00000550557 CCDC144BQ3MJ40 725 aa13.2□□□□□ -0.3
NR4A1-215ENST00000550557 TBC1D31Q96DN5 1066 aa13.2□□□□□ -0.3
NR4A1-215ENST00000550557 CNOT6LQ96LI5 555 aaKnown RBP13.2□□□□□ -0.3
NR4A1-215ENST00000550557 KIAA1586Q9HCI6 787 aa13.2□□□□□ -0.3
NR4A1-215ENST00000550557 AK9Q5TCS8 1911 aa13.2□□□□□ -0.3
NR4A1-215ENST00000550557 TRAPPC3O43617 180 aa13.2□□□□□ -0.3
NR4A1-215ENST00000550557 PDHBP11177 359 aa13.2□□□□□ -0.3
NR4A1-215ENST00000550557 VEPH1Q14D04 833 aa13.2□□□□□ -0.3
NR4A1-215ENST00000550557 SECISBP2LQ93073 1101 aaKnown RBP13.2□□□□□ -0.3
NR4A1-215ENST00000550557 PAIP2Q9BPZ3 127 aaKnown RBP13.2□□□□□ -0.3
NR4A1-215ENST00000550557 DESI2Q9BSY9 194 aa13.2□□□□□ -0.3
NR4A1-215ENST00000550557 IFT122Q9HBG6 1241 aa13.2□□□□□ -0.3
NR4A1-215ENST00000550557 ATP11BQ9Y2G3 1177 aa13.2□□□□□ -0.3
NR4A1-215ENST00000550557 NR2E3Q9Y5X4 410 aa13.2□□□□□ -0.3
NR4A1-215ENST00000550557 PSMC4P43686 418 aa13.2□□□□□ -0.3
NR4A1-215ENST00000550557 TTC30AQ86WT1 665 aa13.2□□□□□ -0.3
NR4A1-215ENST00000550557 MAP7D3Q8IWC1 876 aa13.2□□□□□ -0.3
NR4A1-215ENST00000550557 C10orf67Q8IYJ2 551 aa13.2□□□□□ -0.3
NR4A1-215ENST00000550557 LMCD1Q9NZU5 365 aa13.2□□□□□ -0.3
NR4A1-215ENST00000550557 TDP2O95551 362 aa13.2□□□□□ -0.3
NR4A1-215ENST00000550557 ORC2Q13416 577 aaPredicted RBP13.2□□□□□ -0.3
NR4A1-215ENST00000550557 CCDC89Q8N998 374 aa13.2□□□□□ -0.3
NR4A1-215ENST00000550557 RAB3IL1Q8TBN0 382 aa13.2□□□□□ -0.3
NR4A1-215ENST00000550557 RNF208Q9H0X6 261 aa13.2□□□□□ -0.3
NR4A1-215ENST00000550557 SUCLA2Q9P2R7 463 aaPredicted RBP13.2□□□□□ -0.3
NR4A1-215ENST00000550557 MAN1B1Q9UKM7 699 aa13.2□□□□□ -0.3
NR4A1-215ENST00000550557 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.2□□□□□ -0.3
NR4A1-215ENST00000550557 NFAT5O94916 1531 aa13.2□□□□□ -0.3
NR4A1-215ENST00000550557 DACT2Q5SW24 774 aa13.19□□□□□ -0.3
NR4A1-215ENST00000550557 RGMBQ6NW40 437 aa13.19□□□□□ -0.3
NR4A1-215ENST00000550557 OR8K1Q8NGG5 319 aa13.19□□□□□ -0.3
NR4A1-215ENST00000550557 SLC38A10Q9HBR0 1119 aa13.19□□□□□ -0.3
NR4A1-215ENST00000550557 POTECB2RU33 542 aa13.19□□□□□ -0.3
NR4A1-215ENST00000550557 GOLGA8SH3BPF8 625 aa13.19□□□□□ -0.3
NR4A1-215ENST00000550557 CEP104O60308 925 aa13.19□□□□□ -0.3
NR4A1-215ENST00000550557 CTDNEP1O95476 244 aa13.19□□□□□ -0.3
NR4A1-215ENST00000550557 GOLGA8FQ08AF8 430 aa13.19□□□□□ -0.3
NR4A1-215ENST00000550557 GOLGA8DPQ0D2H9 430 aa13.19□□□□□ -0.3
NR4A1-215ENST00000550557 UPF1Q92900 1129 aaKnown RBP eCLIP13.19□□□□□ -0.3
NR4A1-215ENST00000550557 HAUS1Q96CS2 278 aa13.19□□□□□ -0.3
NR4A1-215ENST00000550557 EPSTI1Q96J88 318 aa13.19□□□□□ -0.3
NR4A1-215ENST00000550557 BPIFA3Q9BQP9 254 aa13.19□□□□□ -0.3
NR4A1-215ENST00000550557 MAP3K20Q9NYL2 800 aaKnown RBP13.19□□□□□ -0.3
NR4A1-215ENST00000550557 ERAP1Q9NZ08 941 aa13.19□□□□□ -0.3
NR4A1-215ENST00000550557 ASIC3Q9UHC3 531 aa13.19□□□□□ -0.3
NR4A1-215ENST00000550557 NOC2LQ9Y3T9 749 aaKnown RBP13.19□□□□□ -0.3
NR4A1-215ENST00000550557 CIITAP33076 1130 aa13.19□□□□□ -0.3
NR4A1-215ENST00000550557 ANTXR2P58335 489 aa13.19□□□□□ -0.3
NR4A1-215ENST00000550557 RPS6P62753 249 aaKnown RBP13.19□□□□□ -0.3
NR4A1-215ENST00000550557 UAP1Q16222 522 aaPredicted RBP13.19□□□□□ -0.3
NR4A1-215ENST00000550557 POTEDQ86YR6 584 aa13.19□□□□□ -0.3
NR4A1-215ENST00000550557 IFT81Q8WYA0 676 aa13.19□□□□□ -0.3
NR4A1-215ENST00000550557 IFIH1Q9BYX4 1025 aaKnown RBP13.19□□□□□ -0.3
NR4A1-215ENST00000550557 STARD7Q9NQZ5 370 aa13.19□□□□□ -0.3
NR4A1-215ENST00000550557 DDTLA6NHG4 134 aaPredicted RBP13.19□□□□□ -0.3
NR4A1-215ENST00000550557 E9PMD0 336 aa13.19□□□□□ -0.3
NR4A1-215ENST00000550557 SH3BP5O60239 455 aa13.19□□□□□ -0.3
NR4A1-215ENST00000550557 EFNA5P52803 228 aa13.19□□□□□ -0.3
NR4A1-215ENST00000550557 FBXO38Q6PIJ6 1188 aa13.19□□□□□ -0.3
NR4A1-215ENST00000550557 ENOX1Q8TC92 643 aaKnown RBP13.19□□□□□ -0.3
NR4A1-215ENST00000550557 MAIP1Q8WWC4 291 aa13.19□□□□□ -0.3
NR4A1-215ENST00000550557 OR6B2Q6IFH4 312 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms