RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 SARSP49591 514 aaKnown RBP24.66■■□□□ 1.54
SMARCC2-210ENST00000550519 NFX1Q12986 1120 aaKnown RBP24.66■■□□□ 1.54
SMARCC2-210ENST00000550519 ADAM15Q13444 863 aa24.66■■□□□ 1.54
SMARCC2-210ENST00000550519 PAN2Q504Q3 1202 aaKnown RBP24.66■■□□□ 1.54
SMARCC2-210ENST00000550519 ZNF484Q5JVG2 852 aa24.66■■□□□ 1.54
SMARCC2-210ENST00000550519 SWSAP1Q6NVH7 229 aa24.66■■□□□ 1.54
SMARCC2-210ENST00000550519 MIS18BP1Q6P0N0 1132 aa24.66■■□□□ 1.54
SMARCC2-210ENST00000550519 PDXDC2PQ6P474 469 aa24.66■■□□□ 1.54
SMARCC2-210ENST00000550519 KLHL23Q8NBE8 558 aa24.66■■□□□ 1.54
SMARCC2-210ENST00000550519 NOC2LQ9Y3T9 749 aaKnown RBP24.66■■□□□ 1.54
SMARCC2-210ENST00000550519 CCDC196A0A1B0GTZ2 297 aa24.65■■□□□ 1.54
SMARCC2-210ENST00000550519 ADAMTS3O15072 1205 aa24.65■■□□□ 1.54
SMARCC2-210ENST00000550519 LINC01565O15544 149 aa24.65■■□□□ 1.54
SMARCC2-210ENST00000550519 MBTPS2O43462 519 aa24.65■■□□□ 1.54
SMARCC2-210ENST00000550519 DCXO43602 365 aa24.65■■□□□ 1.54
SMARCC2-210ENST00000550519 MGEA5O60502 916 aa24.65■■□□□ 1.54
SMARCC2-210ENST00000550519 TBX10O75333 385 aa24.65■■□□□ 1.54
SMARCC2-210ENST00000550519 CSPG5O95196 566 aa24.65■■□□□ 1.54
SMARCC2-210ENST00000550519 HOXD11P31277 338 aaPredicted RBP24.65■■□□□ 1.54
SMARCC2-210ENST00000550519 GATMP50440 423 aa24.65■■□□□ 1.54
SMARCC2-210ENST00000550519 METAP2P50579 478 aaKnown RBP eCLIP24.65■■□□□ 1.54
SMARCC2-210ENST00000550519 MCTP2Q6DN12 878 aa24.65■■□□□ 1.54
SMARCC2-210ENST00000550519 TMEM40Q8WWA1 233 aa24.65■■□□□ 1.54
SMARCC2-210ENST00000550519 KCNB2Q92953 911 aa24.65■■□□□ 1.54
SMARCC2-210ENST00000550519 IGFLR1Q9H665 355 aa24.65■■□□□ 1.54
SMARCC2-210ENST00000550519 LRFN2Q9ULH4 789 aa24.65■■□□□ 1.54
SMARCC2-210ENST00000550519 NAP1L2Q9ULW6 460 aaPredicted RBP24.65■■□□□ 1.54
SMARCC2-210ENST00000550519 GINS2Q9Y248 185 aa24.65■■□□□ 1.54
SMARCC2-210ENST00000550519 RPS6KA5O75582 802 aa24.64■■□□□ 1.54
SMARCC2-210ENST00000550519 CLUL1Q15846 466 aa24.64■■□□□ 1.54
SMARCC2-210ENST00000550519 PKN1Q16512 942 aa24.64■■□□□ 1.54
SMARCC2-210ENST00000550519 PPP2R3CQ969Q6 453 aa24.64■■□□□ 1.54
SMARCC2-210ENST00000550519 ZNF577Q9BSK1 485 aa24.64■■□□□ 1.54
SMARCC2-210ENST00000550519 TBC1D22BQ9NU19 505 aa24.64■■□□□ 1.54
SMARCC2-210ENST00000550519 MAFBQ9Y5Q3 323 aaPredicted RBP24.64■■□□□ 1.54
SMARCC2-210ENST00000550519 CPA1P15085 419 aa24.63■■□□□ 1.53
SMARCC2-210ENST00000550519 IRS1P35568 1242 aa24.63■■□□□ 1.53
SMARCC2-210ENST00000550519 FGD1P98174 961 aa24.63■■□□□ 1.53
SMARCC2-210ENST00000550519 SETQ01105 290 aaPredicted RBP24.63■■□□□ 1.53
SMARCC2-210ENST00000550519 APOBRQ0VD83 1088 aa24.63■■□□□ 1.53
SMARCC2-210ENST00000550519 SMAD4Q13485 552 aaKnown RBP24.63■■□□□ 1.53
SMARCC2-210ENST00000550519 ZNF746Q6NUN9 644 aaPredicted RBP24.63■■□□□ 1.53
SMARCC2-210ENST00000550519 POF1BQ8WVV4 589 aa24.63■■□□□ 1.53
SMARCC2-210ENST00000550519 UIMC1Q96RL1 719 aa24.63■■□□□ 1.53
SMARCC2-210ENST00000550519 C6orf50Q9HD87 102 aa24.63■■□□□ 1.53
SMARCC2-210ENST00000550519 RGS18Q9NS28 235 aa24.63■■□□□ 1.53
SMARCC2-210ENST00000550519 PCDHB7Q9Y5E2 793 aa24.63■■□□□ 1.53
SMARCC2-210ENST00000550519 PRPF3O43395 683 aaKnown RBP24.62■■□□□ 1.53
SMARCC2-210ENST00000550519 C22orf31O95567 290 aa24.62■■□□□ 1.53
SMARCC2-210ENST00000550519 ODR4Q5SWX8 454 aa24.62■■□□□ 1.53
SMARCC2-210ENST00000550519 Q6ZUG5 572 aa24.62■■□□□ 1.53
SMARCC2-210ENST00000550519 SLC24A5Q71RS6 500 aa24.62■■□□□ 1.53
SMARCC2-210ENST00000550519 ADGRD2Q7Z7M1 963 aa24.62■■□□□ 1.53
SMARCC2-210ENST00000550519 REXO1Q8N1G1 1221 aaKnown RBP24.62■■□□□ 1.53
SMARCC2-210ENST00000550519 CCDC12Q8WUD4 166 aaPredicted RBP24.62■■□□□ 1.53
SMARCC2-210ENST00000550519 BBXQ8WY36 941 aaPredicted RBP24.62■■□□□ 1.53
SMARCC2-210ENST00000550519 MSLNLQ96KJ4 702 aa24.62■■□□□ 1.53
SMARCC2-210ENST00000550519 ADAM2Q99965 735 aa24.62■■□□□ 1.53
SMARCC2-210ENST00000550519 C1orf112Q9NSG2 853 aa24.62■■□□□ 1.53
SMARCC2-210ENST00000550519 CD207Q9UJ71 328 aa24.62■■□□□ 1.53
SMARCC2-210ENST00000550519 ST3GAL5Q9UNP4 418 aa24.62■■□□□ 1.53
SMARCC2-210ENST00000550519 NID2Q14112 1375 aa24.62■■□□□ 1.53
SMARCC2-210ENST00000550519 C9IYK1 514 aa24.61■■□□□ 1.53
SMARCC2-210ENST00000550519 GPR182O15218 404 aa24.61■■□□□ 1.53
SMARCC2-210ENST00000550519 CIITAP33076 1130 aa24.61■■□□□ 1.53
SMARCC2-210ENST00000550519 CRYBB1P53674 252 aaPredicted RBP24.61■■□□□ 1.53
SMARCC2-210ENST00000550519 CKAP2LQ8IYA6 745 aa24.61■■□□□ 1.53
SMARCC2-210ENST00000550519 SMAP1Q8IYB5 467 aaPredicted RBP24.61■■□□□ 1.53
SMARCC2-210ENST00000550519 FBXL16Q8N461 479 aa24.61■■□□□ 1.53
SMARCC2-210ENST00000550519 EFHBQ8N7U6 833 aa24.61■■□□□ 1.53
SMARCC2-210ENST00000550519 BRF1Q92994 677 aa24.61■■□□□ 1.53
SMARCC2-210ENST00000550519 POP1Q99575 1024 aaKnown RBP24.61■■□□□ 1.53
SMARCC2-210ENST00000550519 UPF3BQ9BZI7 483 aaKnown RBP24.61■■□□□ 1.53
SMARCC2-210ENST00000550519 RNF216Q9NWF9 866 aaPredicted RBP24.61■■□□□ 1.53
SMARCC2-210ENST00000550519 LOXHD1Q8IVV2 1947 aa24.61■■□□□ 1.53
SMARCC2-210ENST00000550519 MUC6Q6W4X9 2439 aa24.6■■□□□ 1.53
SMARCC2-210ENST00000550519 DENND3A2RUS2 1198 aa24.6■■□□□ 1.53
SMARCC2-210ENST00000550519 GPR32O75388 356 aa24.6■■□□□ 1.53
SMARCC2-210ENST00000550519 EYA4O95677 639 aa24.6■■□□□ 1.53
SMARCC2-210ENST00000550519 GNA11P29992 359 aa24.6■■□□□ 1.53
SMARCC2-210ENST00000550519 NDUFV1P49821 464 aa24.6■■□□□ 1.53
SMARCC2-210ENST00000550519 KIZQ2M2Z5 673 aa24.6■■□□□ 1.53
SMARCC2-210ENST00000550519 CLEC1BQ9P126 229 aa24.6■■□□□ 1.53
SMARCC2-210ENST00000550519 PCDHA10Q9Y5I2 948 aa24.6■■□□□ 1.53
SMARCC2-210ENST00000550519 PSAPP07602 524 aa24.59■■□□□ 1.53
SMARCC2-210ENST00000550519 IBSPP21815 317 aaPredicted RBP24.59■■□□□ 1.53
SMARCC2-210ENST00000550519 FAM189BP81408 668 aa24.59■■□□□ 1.53
SMARCC2-210ENST00000550519 FAM102BQ5T8I3 360 aa24.59■■□□□ 1.53
SMARCC2-210ENST00000550519 FAM228AQ86W67 206 aa24.59■■□□□ 1.53
SMARCC2-210ENST00000550519 LENG9Q96B70 501 aa24.59■■□□□ 1.53
SMARCC2-210ENST00000550519 JAKMIP1Q96N16 626 aaKnown RBP24.59■■□□□ 1.53
SMARCC2-210ENST00000550519 OSMRQ99650 979 aa24.59■■□□□ 1.53
SMARCC2-210ENST00000550519 AGXT2Q9BYV1 514 aa24.59■■□□□ 1.53
SMARCC2-210ENST00000550519 SNX14Q9Y5W7 946 aa24.59■■□□□ 1.53
SMARCC2-210ENST00000550519 KIAA1671Q9BY89 1806 aa24.58■■□□□ 1.53
SMARCC2-210ENST00000550519 TBKBP1A7MCY6 615 aa24.58■■□□□ 1.53
SMARCC2-210ENST00000550519 HSPA4P34932 840 aa24.58■■□□□ 1.53
SMARCC2-210ENST00000550519 NRIP1P48552 1158 aa24.58■■□□□ 1.53
SMARCC2-210ENST00000550519 UBE3AQ05086 875 aa24.58■■□□□ 1.53
SMARCC2-210ENST00000550519 NTRK3Q16288 839 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms