RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 IGBP1P78318 339 aa14.59□□□□□ -0.07
RAB5C-206ENST00000550406 FAAP100Q0VG06 881 aa14.59□□□□□ -0.07
RAB5C-206ENST00000550406 KARSQ15046 597 aaKnown RBP14.59□□□□□ -0.07
RAB5C-206ENST00000550406 ZNF484Q5JVG2 852 aa14.59□□□□□ -0.07
RAB5C-206ENST00000550406 HAUS3Q68CZ6 603 aa14.59□□□□□ -0.07
RAB5C-206ENST00000550406 WNT8BQ93098 351 aa14.59□□□□□ -0.07
RAB5C-206ENST00000550406 TOX2Q96NM4 488 aa14.59□□□□□ -0.07
RAB5C-206ENST00000550406 ANKEF1Q9NU02 776 aa14.59□□□□□ -0.07
RAB5C-206ENST00000550406 DDX19AQ9NUU7 478 aaKnown RBP14.59□□□□□ -0.07
RAB5C-206ENST00000550406 SEPT9Q9UHD8 586 aaPredicted RBP14.59□□□□□ -0.07
RAB5C-206ENST00000550406 ATP11BQ9Y2G3 1177 aa14.59□□□□□ -0.07
RAB5C-206ENST00000550406 STK24Q9Y6E0 443 aa14.59□□□□□ -0.07
RAB5C-206ENST00000550406 NRCAMQ92823 1304 aa14.59□□□□□ -0.07
RAB5C-206ENST00000550406 SIP14410 1827 aa14.59□□□□□ -0.07
RAB5C-206ENST00000550406 COL1A2P08123 1366 aa14.59□□□□□ -0.07
RAB5C-206ENST00000550406 C17orf102A2RUQ5 167 aa14.58□□□□□ -0.08
RAB5C-206ENST00000550406 RRN3P2A6NIE6 340 aa14.58□□□□□ -0.08
RAB5C-206ENST00000550406 SLC26A4O43511 780 aa14.58□□□□□ -0.08
RAB5C-206ENST00000550406 PQBP1O60828 265 aaKnown RBP14.58□□□□□ -0.08
RAB5C-206ENST00000550406 C22orf31O95567 290 aa14.58□□□□□ -0.08
RAB5C-206ENST00000550406 RARRES1P49788 294 aa14.58□□□□□ -0.08
RAB5C-206ENST00000550406 MTERF2Q49AM1 385 aa14.58□□□□□ -0.08
RAB5C-206ENST00000550406 RESP18Q5W5W9 173 aa14.58□□□□□ -0.08
RAB5C-206ENST00000550406 ADALQ6DHV7 355 aa14.58□□□□□ -0.08
RAB5C-206ENST00000550406 MTHFD1LQ6UB35 978 aa14.58□□□□□ -0.08
RAB5C-206ENST00000550406 RUFY4Q6ZNE9 571 aa14.58□□□□□ -0.08
RAB5C-206ENST00000550406 CLEC17AQ6ZS10 378 aa14.58□□□□□ -0.08
RAB5C-206ENST00000550406 SH3RF1Q7Z6J0 888 aa14.58□□□□□ -0.08
RAB5C-206ENST00000550406 DHX38Q92620 1227 aaKnown RBP14.58□□□□□ -0.08
RAB5C-206ENST00000550406 NACC1Q96RE7 527 aa14.58□□□□□ -0.08
RAB5C-206ENST00000550406 PANK2Q9BZ23 570 aa14.58□□□□□ -0.08
RAB5C-206ENST00000550406 CYP26B1Q9NR63 512 aa14.58□□□□□ -0.08
RAB5C-206ENST00000550406 BLOC1S4Q9NUP1 217 aa14.58□□□□□ -0.08
RAB5C-206ENST00000550406 MKI67P46013 3256 aaKnown RBP14.58□□□□□ -0.08
RAB5C-206ENST00000550406 MYH11P35749 1972 aa14.57□□□□□ -0.08
RAB5C-206ENST00000550406 IGKV6-21A0A0C4DH24 114 aa14.57□□□□□ -0.08
RAB5C-206ENST00000550406 CYP2C9P11712 490 aa14.57□□□□□ -0.08
RAB5C-206ENST00000550406 PLCG1P19174 1290 aa14.57□□□□□ -0.08
RAB5C-206ENST00000550406 KLRC1P26715 233 aa14.57□□□□□ -0.08
RAB5C-206ENST00000550406 MKRN4PQ13434 485 aaPredicted RBP14.57□□□□□ -0.08
RAB5C-206ENST00000550406 ZRSR1Q15695 479 aaKnown RBP14.57□□□□□ -0.08
RAB5C-206ENST00000550406 PTGISQ16647 500 aa14.57□□□□□ -0.08
RAB5C-206ENST00000550406 TRIM71Q2Q1W2 868 aaKnown RBP14.57□□□□□ -0.08
RAB5C-206ENST00000550406 NAALADL2Q58DX5 795 aa14.57□□□□□ -0.08
RAB5C-206ENST00000550406 XKR9Q5GH70 373 aa14.57□□□□□ -0.08
RAB5C-206ENST00000550406 SERINC5Q86VE9 423 aa14.57□□□□□ -0.08
RAB5C-206ENST00000550406 LINC01465Q8N7H1 131 aa14.57□□□□□ -0.08
RAB5C-206ENST00000550406 PDLIM7Q9NR12 457 aa14.57□□□□□ -0.08
RAB5C-206ENST00000550406 DBR1Q9UK59 544 aaKnown RBP14.57□□□□□ -0.08
RAB5C-206ENST00000550406 SCN5AQ14524 2016 aa14.57□□□□□ -0.08
RAB5C-206ENST00000550406 MROH7Q68CQ1 1323 aa14.57□□□□□ -0.08
RAB5C-206ENST00000550406 MAFO75444 373 aaPredicted RBP14.56□□□□□ -0.08
RAB5C-206ENST00000550406 EYA4O95677 639 aa14.56□□□□□ -0.08
RAB5C-206ENST00000550406 CMA1P23946 247 aa14.56□□□□□ -0.08
RAB5C-206ENST00000550406 OTUD6AQ7L8S5 288 aa14.56□□□□□ -0.08
RAB5C-206ENST00000550406 TMEM87AQ8NBN3 555 aa14.56□□□□□ -0.08
RAB5C-206ENST00000550406 CEP170P1Q96L14 293 aa14.56□□□□□ -0.08
RAB5C-206ENST00000550406 DHX33Q9H6R0 707 aaKnown RBP14.56□□□□□ -0.08
RAB5C-206ENST00000550406 XPNPEP1Q9NQW7 623 aa14.56□□□□□ -0.08
RAB5C-206ENST00000550406 TUBE1Q9UJT0 475 aa14.56□□□□□ -0.08
RAB5C-206ENST00000550406 TBX21Q9UL17 535 aa14.56□□□□□ -0.08
RAB5C-206ENST00000550406 PCDHA2Q9Y5H9 948 aa14.56□□□□□ -0.08
RAB5C-206ENST00000550406 LTBP2Q14767 1821 aa14.56□□□□□ -0.08
RAB5C-206ENST00000550406 KDM3AQ9Y4C1 1321 aa14.56□□□□□ -0.08
RAB5C-206ENST00000550406 FAM237AA0A1B0GTK4 181 aa14.55□□□□□ -0.08
RAB5C-206ENST00000550406 A0A1B0GVL5 298 aa14.55□□□□□ -0.08
RAB5C-206ENST00000550406 A0A1W2PQ27 194 aa14.55□□□□□ -0.08
RAB5C-206ENST00000550406 A0A1W2PQ64 194 aa14.55□□□□□ -0.08
RAB5C-206ENST00000550406 A0A1W2PQD8 194 aa14.55□□□□□ -0.08
RAB5C-206ENST00000550406 TRIM43BA6NCK2 446 aa14.55□□□□□ -0.08
RAB5C-206ENST00000550406 DCDC2CA8MYV0 355 aa14.55□□□□□ -0.08
RAB5C-206ENST00000550406 GADD45BO75293 160 aaPredicted RBP14.55□□□□□ -0.08
RAB5C-206ENST00000550406 GNAT1P11488 350 aa14.55□□□□□ -0.08
RAB5C-206ENST00000550406 ITGB8P26012 769 aa14.55□□□□□ -0.08
RAB5C-206ENST00000550406 PTK7Q13308 1070 aa14.55□□□□□ -0.08
RAB5C-206ENST00000550406 DRP2Q13474 957 aa14.55□□□□□ -0.08
RAB5C-206ENST00000550406 E2F4Q16254 413 aa14.55□□□□□ -0.08
RAB5C-206ENST00000550406 KIAA0319LQ8IZA0 1049 aa14.55□□□□□ -0.08
RAB5C-206ENST00000550406 TRIM43Q96BQ3 446 aaPredicted RBP14.55□□□□□ -0.08
RAB5C-206ENST00000550406 CALML4Q96GE6 196 aa14.55□□□□□ -0.08
RAB5C-206ENST00000550406 HTATIP2Q9BUP3 242 aa14.55□□□□□ -0.08
RAB5C-206ENST00000550406 NT5C3AQ9H0P0 336 aa14.55□□□□□ -0.08
RAB5C-206ENST00000550406 BHMT2Q9H2M3 363 aa14.55□□□□□ -0.08
RAB5C-206ENST00000550406 GOLPH3LQ9H4A5 285 aa14.55□□□□□ -0.08
RAB5C-206ENST00000550406 DNM3Q9UQ16 869 aa14.55□□□□□ -0.08
RAB5C-206ENST00000550406 HPSEQ9Y251 543 aa14.55□□□□□ -0.08
RAB5C-206ENST00000550406 UMODL1Q5DID0 1318 aa14.55□□□□□ -0.08
RAB5C-206ENST00000550406 TANC1Q9C0D5 1861 aa14.55□□□□□ -0.08
RAB5C-206ENST00000550406 TLR3O15455 904 aaKnown RBP14.54□□□□□ -0.08
RAB5C-206ENST00000550406 CLTBP09497 229 aa14.54□□□□□ -0.08
RAB5C-206ENST00000550406 SLC12A3P55017 1021 aa14.54□□□□□ -0.08
RAB5C-206ENST00000550406 MCM6Q14566 821 aa14.54□□□□□ -0.08
RAB5C-206ENST00000550406 TPRNQ4KMQ1 711 aa14.54□□□□□ -0.08
RAB5C-206ENST00000550406 EFCAB12Q6NXP0 572 aa14.54□□□□□ -0.08
RAB5C-206ENST00000550406 TRAF7Q6Q0C0 670 aa14.54□□□□□ -0.08
RAB5C-206ENST00000550406 PADI6Q6TGC4 694 aa14.54□□□□□ -0.08
RAB5C-206ENST00000550406 C7orf61Q8IZ16 206 aa14.54□□□□□ -0.08
RAB5C-206ENST00000550406 LRRC71Q8N4P6 559 aa14.54□□□□□ -0.08
RAB5C-206ENST00000550406 KCTD17Q8N5Z5 321 aa14.54□□□□□ -0.08
RAB5C-206ENST00000550406 PDILTQ8N807 584 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms